RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 IL36RNQ9UBH0 155 aa5.44□□□□□ -1.54
PRKDC-205ENST00000535375 FEM1BQ9UK73 627 aa5.44□□□□□ -1.54
PRKDC-205ENST00000535375 DNAJC16Q9Y2G8 782 aa5.44□□□□□ -1.54
PRKDC-205ENST00000535375 SLC28A2O43868 658 aa5.43□□□□□ -1.54
PRKDC-205ENST00000535375 RFX5P48382 616 aaPredicted RBP5.43□□□□□ -1.54
PRKDC-205ENST00000535375 PMS2P54278 862 aa5.43□□□□□ -1.54
PRKDC-205ENST00000535375 CRYZQ08257 329 aaKnown RBP5.43□□□□□ -1.54
PRKDC-205ENST00000535375 Q0VFX4 171 aa5.43□□□□□ -1.54
PRKDC-205ENST00000535375 ANKRD1Q15327 319 aa5.43□□□□□ -1.54
PRKDC-205ENST00000535375 SH2D4BQ5SQS7 431 aa5.43□□□□□ -1.54
PRKDC-205ENST00000535375 MON1BQ7L1V2 547 aa5.43□□□□□ -1.54
PRKDC-205ENST00000535375 SPATA2LQ8IUW3 424 aaPredicted RBP5.43□□□□□ -1.54
PRKDC-205ENST00000535375 ADHFE1Q8IWW8 467 aa5.43□□□□□ -1.54
PRKDC-205ENST00000535375 TBC1D22AQ8WUA7 517 aa5.43□□□□□ -1.54
PRKDC-205ENST00000535375 ATOH1Q92858 354 aaPredicted RBP5.43□□□□□ -1.54
PRKDC-205ENST00000535375 SH3KBP1Q96B97 665 aa5.43□□□□□ -1.54
PRKDC-205ENST00000535375 MED30Q96HR3 178 aa5.43□□□□□ -1.54
PRKDC-205ENST00000535375 COG8Q96MW5 612 aa5.43□□□□□ -1.54
PRKDC-205ENST00000535375 TTC12Q9H892 705 aaPredicted RBP5.43□□□□□ -1.54
PRKDC-205ENST00000535375 ITM2CQ9NQX7 267 aa5.43□□□□□ -1.54
PRKDC-205ENST00000535375 TLR8Q9NR97 1041 aaKnown RBP5.43□□□□□ -1.54
PRKDC-205ENST00000535375 CD207Q9UJ71 328 aa5.43□□□□□ -1.54
PRKDC-205ENST00000535375 MORC2Q9Y6X9 1032 aaPredicted RBP5.43□□□□□ -1.54
PRKDC-205ENST00000535375 FAM157AC9JC47 383 aa5.42□□□□□ -1.54
PRKDC-205ENST00000535375 ITM2AO43736 263 aa5.42□□□□□ -1.54
PRKDC-205ENST00000535375 WEE2P0C1S8 567 aa5.42□□□□□ -1.54
PRKDC-205ENST00000535375 HNF1BP35680 557 aa5.42□□□□□ -1.54
PRKDC-205ENST00000535375 TRAF2Q12933 501 aa5.42□□□□□ -1.54
PRKDC-205ENST00000535375 INO80DQ53TQ3 878 aaPredicted RBP5.42□□□□□ -1.54
PRKDC-205ENST00000535375 ATG9BQ674R7 924 aa5.42□□□□□ -1.54
PRKDC-205ENST00000535375 CRELD2Q6UXH1 353 aaPredicted RBP5.42□□□□□ -1.54
PRKDC-205ENST00000535375 TRIM74Q86UV6 250 aa5.42□□□□□ -1.54
PRKDC-205ENST00000535375 TRIM73Q86UV7 250 aa5.42□□□□□ -1.54
PRKDC-205ENST00000535375 NKAPQ8N5F7 415 aaKnown RBP5.42□□□□□ -1.54
PRKDC-205ENST00000535375 MIGA1Q8NAN2 632 aa5.42□□□□□ -1.54
PRKDC-205ENST00000535375 DNAAF1Q8NEP3 725 aa5.42□□□□□ -1.54
PRKDC-205ENST00000535375 OR14A16Q8NHC5 309 aa5.42□□□□□ -1.54
PRKDC-205ENST00000535375 TMEM163Q8TC26 289 aa5.42□□□□□ -1.54
PRKDC-205ENST00000535375 NUDCD2Q8WVJ2 157 aa5.42□□□□□ -1.54
PRKDC-205ENST00000535375 RNFT2Q96EX2 444 aa5.42□□□□□ -1.54
PRKDC-205ENST00000535375 CXorf56Q9H5V9 222 aa5.42□□□□□ -1.54
PRKDC-205ENST00000535375 RASSF1Q9NS23 344 aa5.42□□□□□ -1.54
PRKDC-205ENST00000535375 NLKQ9UBE8 527 aa5.42□□□□□ -1.54
PRKDC-205ENST00000535375 CNPY2Q9Y2B0 182 aa5.42□□□□□ -1.54
PRKDC-205ENST00000535375 C17orf100A8MU93 164 aa5.41□□□□□ -1.54
PRKDC-205ENST00000535375 PEX12O00623 359 aa5.41□□□□□ -1.54
PRKDC-205ENST00000535375 LDB2O43679 373 aa5.41□□□□□ -1.54
PRKDC-205ENST00000535375 DHX16O60231 1041 aaKnown RBP5.41□□□□□ -1.54
PRKDC-205ENST00000535375 GLUD1P00367 558 aa5.41□□□□□ -1.54
PRKDC-205ENST00000535375 NAGAP17050 411 aa5.41□□□□□ -1.54
PRKDC-205ENST00000535375 GNLYP22749 145 aa5.41□□□□□ -1.54
PRKDC-205ENST00000535375 PTPN9P43378 593 aa5.41□□□□□ -1.54
PRKDC-205ENST00000535375 GLUD2P49448 558 aa5.41□□□□□ -1.54
PRKDC-205ENST00000535375 ABATP80404 500 aa5.41□□□□□ -1.54
PRKDC-205ENST00000535375 KLHL22Q53GT1 634 aa5.41□□□□□ -1.54
PRKDC-205ENST00000535375 TBC1D9BQ66K14 1250 aa5.41□□□□□ -1.54
PRKDC-205ENST00000535375 GJB7Q6PEY0 223 aa5.41□□□□□ -1.54
PRKDC-205ENST00000535375 SUGP1Q8IWZ8 645 aaKnown RBP5.41□□□□□ -1.54
PRKDC-205ENST00000535375 SETD9Q8NE22 299 aa5.41□□□□□ -1.54
PRKDC-205ENST00000535375 HSPH1Q92598 858 aa5.41□□□□□ -1.54
PRKDC-205ENST00000535375 TMEM18Q96B42 140 aa5.41□□□□□ -1.54
PRKDC-205ENST00000535375 PHF21BQ96EK2 531 aa5.41□□□□□ -1.54
PRKDC-205ENST00000535375 HERPUD2Q9BSE4 406 aa5.41□□□□□ -1.54
PRKDC-205ENST00000535375 KRTAP1-5Q9BYS1 174 aa5.41□□□□□ -1.54
PRKDC-205ENST00000535375 CDT1Q9H211 546 aa5.41□□□□□ -1.54
PRKDC-205ENST00000535375 ENTPD7Q9NQZ7 604 aa5.41□□□□□ -1.54
PRKDC-205ENST00000535375 ATP8A2Q9NTI2 1148 aa5.41□□□□□ -1.54
PRKDC-205ENST00000535375 GDAQ9Y2T3 454 aa5.41□□□□□ -1.54
PRKDC-205ENST00000535375 CLDN7O95471 211 aa5.4□□□□□ -1.54
PRKDC-205ENST00000535375 TNFRSF8P28908 595 aa5.4□□□□□ -1.54
PRKDC-205ENST00000535375 THPOP40225 353 aa5.4□□□□□ -1.54
PRKDC-205ENST00000535375 HALP42357 657 aa5.4□□□□□ -1.54
PRKDC-205ENST00000535375 NUDT6P53370 316 aa5.4□□□□□ -1.54
PRKDC-205ENST00000535375 KRTAP10-9P60411 292 aa5.4□□□□□ -1.54
PRKDC-205ENST00000535375 SLC12A1Q13621 1099 aa5.4□□□□□ -1.54
PRKDC-205ENST00000535375 ASIC2Q16515 512 aa5.4□□□□□ -1.54
PRKDC-205ENST00000535375 TDRD12Q587J7 1177 aaKnown RBP5.4□□□□□ -1.54
PRKDC-205ENST00000535375 FBXO47Q5MNV8 452 aa5.4□□□□□ -1.54
PRKDC-205ENST00000535375 HERC6Q8IVU3 1022 aa5.4□□□□□ -1.54
PRKDC-205ENST00000535375 TEX45Q8NA69 505 aa5.4□□□□□ -1.54
PRKDC-205ENST00000535375 USP38Q8NB14 1042 aa5.4□□□□□ -1.54
PRKDC-205ENST00000535375 RASSF8Q8NHQ8 419 aa5.4□□□□□ -1.54
PRKDC-205ENST00000535375 STAMQ92783 540 aa5.4□□□□□ -1.54
PRKDC-205ENST00000535375 ZSCAN31Q96LW9 406 aaPredicted RBP5.4□□□□□ -1.54
PRKDC-205ENST00000535375 PYM1Q9BRP8 204 aaKnown RBP5.4□□□□□ -1.54
PRKDC-205ENST00000535375 PPCSQ9HAB8 311 aa5.4□□□□□ -1.54
PRKDC-205ENST00000535375 C4orf47A7E2U8 309 aa5.39□□□□□ -1.55
PRKDC-205ENST00000535375 KDM4EB2RXH2 506 aaPredicted RBP5.39□□□□□ -1.55
PRKDC-205ENST00000535375 GTPBP1O00178 669 aaKnown RBP5.39□□□□□ -1.55
PRKDC-205ENST00000535375 KLK10O43240 276 aa5.39□□□□□ -1.55
PRKDC-205ENST00000535375 SLC25A17O43808 307 aa5.39□□□□□ -1.55
PRKDC-205ENST00000535375 TSPAN3O60637 253 aa5.39□□□□□ -1.55
PRKDC-205ENST00000535375 SERPINC1P01008 464 aa5.39□□□□□ -1.55
PRKDC-205ENST00000535375 CKMT1AP12532 417 aa5.39□□□□□ -1.55
PRKDC-205ENST00000535375 PRAMEF19Q5SWL8 479 aa5.39□□□□□ -1.55
PRKDC-205ENST00000535375 PATL1Q86TB9 770 aaKnown RBP5.39□□□□□ -1.55
PRKDC-205ENST00000535375 FJX1Q86VR8 437 aa5.39□□□□□ -1.55
PRKDC-205ENST00000535375 RBFAQ8N0V3 343 aa5.39□□□□□ -1.55
PRKDC-205ENST00000535375 ANKRD42Q8N9B4 389 aa5.39□□□□□ -1.55
PRKDC-205ENST00000535375 ADAMTS14Q8WXS8 1223 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms