RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 ENTPD1P49961 510 aa16.11■□□□□ 0.17
MCF2L-232ENST00000535094 DPYSL2Q16555 572 aa16.11■□□□□ 0.17
MCF2L-232ENST00000535094 INSCQ1MX18 579 aa16.11■□□□□ 0.17
MCF2L-232ENST00000535094 ARL13BQ3SXY8 428 aa16.11■□□□□ 0.17
MCF2L-232ENST00000535094 SYPL2Q5VXT5 272 aa16.11■□□□□ 0.17
MCF2L-232ENST00000535094 CYP4V2Q6ZWL3 525 aaPredicted RBP16.11■□□□□ 0.17
MCF2L-232ENST00000535094 LDB1Q86U70 411 aaPredicted RBP16.11■□□□□ 0.17
MCF2L-232ENST00000535094 ARNTL2Q8WYA1 636 aa16.11■□□□□ 0.17
MCF2L-232ENST00000535094 FZD8Q9H461 694 aa16.11■□□□□ 0.17
MCF2L-232ENST00000535094 CROTQ9UKG9 612 aa16.11■□□□□ 0.17
MCF2L-232ENST00000535094 TLL2Q9Y6L7 1015 aa16.11■□□□□ 0.17
MCF2L-232ENST00000535094 YAP1P46937 504 aaKnown RBP16.11■□□□□ 0.17
MCF2L-232ENST00000535094 GRM1Q13255 1194 aa16.11■□□□□ 0.17
MCF2L-232ENST00000535094 CAPRIN1Q14444 709 aaKnown RBP16.11■□□□□ 0.17
MCF2L-232ENST00000535094 PAN2Q504Q3 1202 aaKnown RBP16.11■□□□□ 0.17
MCF2L-232ENST00000535094 CXorf38Q8TB03 319 aa16.11■□□□□ 0.17
MCF2L-232ENST00000535094 CXCL16Q9H2A7 254 aa16.11■□□□□ 0.17
MCF2L-232ENST00000535094 TBC1D23Q9NUY8 699 aa16.11■□□□□ 0.17
MCF2L-232ENST00000535094 PHF24Q9UPV7 400 aa16.11■□□□□ 0.17
MCF2L-232ENST00000535094 A0A0J9YVX5 310 aa16.11■□□□□ 0.17
MCF2L-232ENST00000535094 TRPC5OSA6NMA1 111 aa16.11■□□□□ 0.17
MCF2L-232ENST00000535094 SLC5A3P53794 718 aa16.11■□□□□ 0.17
MCF2L-232ENST00000535094 PPP1R3AQ16821 1122 aa16.11■□□□□ 0.17
MCF2L-232ENST00000535094 DALRD3Q5D0E6 543 aaKnown RBP16.11■□□□□ 0.17
MCF2L-232ENST00000535094 NAT16Q8N8M0 369 aa16.11■□□□□ 0.17
MCF2L-232ENST00000535094 CCDC138Q96M89 665 aa16.11■□□□□ 0.17
MCF2L-232ENST00000535094 GMPR2Q9P2T1 348 aaKnown RBP16.11■□□□□ 0.17
MCF2L-232ENST00000535094 COL5A3P25940 1745 aaPredicted RBP16.11■□□□□ 0.17
MCF2L-232ENST00000535094 BOLA2-SMG1P6H3BVE0 249 aa16.1■□□□□ 0.17
MCF2L-232ENST00000535094 MATN2O00339 956 aa16.1■□□□□ 0.17
MCF2L-232ENST00000535094 CDK4P11802 303 aa16.1■□□□□ 0.17
MCF2L-232ENST00000535094 SLC5A2P31639 672 aa16.1■□□□□ 0.17
MCF2L-232ENST00000535094 METTL21CQ5VZV1 264 aa16.1■□□□□ 0.17
MCF2L-232ENST00000535094 ZNF410Q86VK4 478 aa16.1■□□□□ 0.17
MCF2L-232ENST00000535094 MARVELD2Q8N4S9 558 aa16.1■□□□□ 0.17
MCF2L-232ENST00000535094 CBR4Q8N4T8 237 aa16.1■□□□□ 0.17
MCF2L-232ENST00000535094 EMID1Q96A84 441 aaPredicted RBP16.1■□□□□ 0.17
MCF2L-232ENST00000535094 R3HDMLQ9H3Y0 253 aa16.1■□□□□ 0.17
MCF2L-232ENST00000535094 ZDHHC7Q9NXF8 308 aa16.1■□□□□ 0.17
MCF2L-232ENST00000535094 GIMAP2Q9UG22 337 aa16.1■□□□□ 0.17
MCF2L-232ENST00000535094 SFMBT1Q9UHJ3 866 aa16.1■□□□□ 0.17
MCF2L-232ENST00000535094 CLEC11AQ9Y240 323 aa16.1■□□□□ 0.17
MCF2L-232ENST00000535094 SMIM18P0DKX4 95 aa16.1■□□□□ 0.17
MCF2L-232ENST00000535094 YBX3P16989 372 aaKnown RBP eCLIP16.1■□□□□ 0.17
MCF2L-232ENST00000535094 CSE1LP55060 971 aaKnown RBP16.1■□□□□ 0.17
MCF2L-232ENST00000535094 NIPAL4Q0D2K0 466 aa16.1■□□□□ 0.17
MCF2L-232ENST00000535094 LAMC2Q13753 1193 aa16.1■□□□□ 0.17
MCF2L-232ENST00000535094 MGAT5BQ3V5L5 792 aa16.1■□□□□ 0.17
MCF2L-232ENST00000535094 SPPL2CQ8IUH8 684 aa16.1■□□□□ 0.17
MCF2L-232ENST00000535094 RPL10LQ96L21 214 aaKnown RBP16.1■□□□□ 0.17
MCF2L-232ENST00000535094 POLR1BQ9H9Y6 1135 aa16.1■□□□□ 0.17
MCF2L-232ENST00000535094 SETD4Q9NVD3 440 aa16.1■□□□□ 0.17
MCF2L-232ENST00000535094 OXSMQ9NWU1 459 aa16.1■□□□□ 0.17
MCF2L-232ENST00000535094 PAIP2BQ9ULR5 123 aaKnown RBP16.1■□□□□ 0.17
MCF2L-232ENST00000535094 C1orf232A0A0U1RR37 186 aa16.1■□□□□ 0.17
MCF2L-232ENST00000535094 CLOCKO15516 846 aa16.1■□□□□ 0.17
MCF2L-232ENST00000535094 TADA2AO75478 443 aa16.1■□□□□ 0.17
MCF2L-232ENST00000535094 USP17L7P0C7H9 530 aa16.1■□□□□ 0.17
MCF2L-232ENST00000535094 ZNF23P17027 643 aa16.1■□□□□ 0.17
MCF2L-232ENST00000535094 FBXO47Q5MNV8 452 aa16.1■□□□□ 0.17
MCF2L-232ENST00000535094 NAPEPLDQ6IQ20 393 aa16.1■□□□□ 0.17
MCF2L-232ENST00000535094 XKR5Q6UX68 686 aa16.1■□□□□ 0.17
MCF2L-232ENST00000535094 FASTKD5Q7L8L6 764 aaKnown RBP16.1■□□□□ 0.17
MCF2L-232ENST00000535094 PATL1Q86TB9 770 aaKnown RBP16.1■□□□□ 0.17
MCF2L-232ENST00000535094 TUBGCP3Q96CW5 907 aa16.1■□□□□ 0.17
MCF2L-232ENST00000535094 TEPSINQ96N21 525 aa16.1■□□□□ 0.17
MCF2L-232ENST00000535094 SOX17Q9H6I2 414 aaPredicted RBP16.1■□□□□ 0.17
MCF2L-232ENST00000535094 FBRSL1Q9HCM7 1045 aaKnown RBP16.1■□□□□ 0.17
MCF2L-232ENST00000535094 DLX3O60479 287 aa16.09■□□□□ 0.17
MCF2L-232ENST00000535094 C1QAP02745 245 aa16.09■□□□□ 0.17
MCF2L-232ENST00000535094 PFKMP08237 780 aa16.09■□□□□ 0.17
MCF2L-232ENST00000535094 MLNP12872 115 aa16.09■□□□□ 0.17
MCF2L-232ENST00000535094 EEF1DP29692 281 aaKnown RBP16.09■□□□□ 0.17
MCF2L-232ENST00000535094 CXCR3P49682 368 aa16.09■□□□□ 0.17
MCF2L-232ENST00000535094 TRAF2Q12933 501 aa16.09■□□□□ 0.17
MCF2L-232ENST00000535094 ESRP1Q6NXG1 681 aaKnown RBP16.09■□□□□ 0.17
MCF2L-232ENST00000535094 AHI1Q8N157 1196 aa16.09■□□□□ 0.17
MCF2L-232ENST00000535094 KLHL23Q8NBE8 558 aa16.09■□□□□ 0.17
MCF2L-232ENST00000535094 MAGEE2Q8TD90 523 aaPredicted RBP16.09■□□□□ 0.17
MCF2L-232ENST00000535094 CANT1Q8WVQ1 401 aa16.09■□□□□ 0.17
MCF2L-232ENST00000535094 SLC29A1Q99808 456 aa16.09■□□□□ 0.17
MCF2L-232ENST00000535094 ULBP1Q9BZM6 244 aa16.09■□□□□ 0.17
MCF2L-232ENST00000535094 WDCPQ9H6R7 721 aa16.09■□□□□ 0.17
MCF2L-232ENST00000535094 MKS1Q9NXB0 559 aa16.09■□□□□ 0.17
MCF2L-232ENST00000535094 HACD1B0YJ81 288 aa16.09■□□□□ 0.17
MCF2L-232ENST00000535094 TMEM114B3SHH9 223 aa16.09■□□□□ 0.17
MCF2L-232ENST00000535094 FAM72CH0Y354 149 aa16.09■□□□□ 0.17
MCF2L-232ENST00000535094 GAS2O43903 313 aaKnown RBP16.09■□□□□ 0.17
MCF2L-232ENST00000535094 FAM189A1O60320 539 aa16.09■□□□□ 0.17
MCF2L-232ENST00000535094 CABYRO75952 493 aa16.09■□□□□ 0.17
MCF2L-232ENST00000535094 BAIAP3O94812 1187 aa16.09■□□□□ 0.17
MCF2L-232ENST00000535094 ENDOD1O94919 500 aa16.09■□□□□ 0.17
MCF2L-232ENST00000535094 FBXO21O94952 628 aa16.09■□□□□ 0.17
MCF2L-232ENST00000535094 GSRP00390 522 aa16.09■□□□□ 0.17
MCF2L-232ENST00000535094 APOA4P06727 396 aa16.09■□□□□ 0.17
MCF2L-232ENST00000535094 PTPN3P26045 913 aa16.09■□□□□ 0.17
MCF2L-232ENST00000535094 MATKP42679 507 aa16.09■□□□□ 0.17
MCF2L-232ENST00000535094 NSUN2Q08J23 767 aaKnown RBP eCLIP16.09■□□□□ 0.17
MCF2L-232ENST00000535094 MAPRE2Q15555 327 aa16.09■□□□□ 0.17
MCF2L-232ENST00000535094 SH3D19Q5HYK7 790 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms