RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 L2HGDHQ9H9P8 463 aa12.11□□□□□ -0.47
COMMD9-208ENST00000533643 PCYOX1Q9UHG3 505 aa12.11□□□□□ -0.47
COMMD9-208ENST00000533643 TRHDEQ9UKU6 1024 aa12.11□□□□□ -0.47
COMMD9-208ENST00000533643 ATP8A1Q9Y2Q0 1164 aa12.11□□□□□ -0.47
COMMD9-208ENST00000533643 STON1Q9Y6Q2 735 aa12.11□□□□□ -0.47
COMMD9-208ENST00000533643 NCOR1O75376 2440 aa12.11□□□□□ -0.47
COMMD9-208ENST00000533643 EDDM13A0A1B0GTR0 161 aa12.1□□□□□ -0.47
COMMD9-208ENST00000533643 SGK1O00141 431 aa12.1□□□□□ -0.47
COMMD9-208ENST00000533643 STK25O00506 426 aa12.1□□□□□ -0.47
COMMD9-208ENST00000533643 ZBTB24O43167 697 aaPredicted RBP12.1□□□□□ -0.47
COMMD9-208ENST00000533643 HLA-DQB2P05538 268 aa12.1□□□□□ -0.47
COMMD9-208ENST00000533643 ETS1P14921 441 aa12.1□□□□□ -0.47
COMMD9-208ENST00000533643 CD68P34810 354 aaPredicted RBP12.1□□□□□ -0.47
COMMD9-208ENST00000533643 PTGIRP43119 386 aa12.1□□□□□ -0.47
COMMD9-208ENST00000533643 RHOAP61586 193 aa12.1□□□□□ -0.47
COMMD9-208ENST00000533643 C2orf54Q08AI8 447 aa12.1□□□□□ -0.47
COMMD9-208ENST00000533643 NSUN2Q08J23 767 aaKnown RBP eCLIP12.1□□□□□ -0.47
COMMD9-208ENST00000533643 GAS6Q14393 721 aa12.1□□□□□ -0.47
COMMD9-208ENST00000533643 KCTD19Q17RG1 926 aaPredicted RBP12.1□□□□□ -0.47
COMMD9-208ENST00000533643 ANKRD20A2Q5SQ80 823 aa12.1□□□□□ -0.47
COMMD9-208ENST00000533643 ATXN7L2Q5T6C5 722 aaPredicted RBP12.1□□□□□ -0.47
COMMD9-208ENST00000533643 C9orf64Q5T6V5 341 aa12.1□□□□□ -0.47
COMMD9-208ENST00000533643 ANKRD20A1Q5TYW2 823 aa12.1□□□□□ -0.47
COMMD9-208ENST00000533643 ANKRD20A3Q5VUR7 823 aa12.1□□□□□ -0.47
COMMD9-208ENST00000533643 PKN3Q6P5Z2 889 aa12.1□□□□□ -0.47
COMMD9-208ENST00000533643 Q6ZS52 159 aa12.1□□□□□ -0.47
COMMD9-208ENST00000533643 Q6ZVU0 165 aa12.1□□□□□ -0.47
COMMD9-208ENST00000533643 TRMT11Q7Z4G4 463 aaKnown RBP12.1□□□□□ -0.47
COMMD9-208ENST00000533643 PRUNE1Q86TP1 453 aa12.1□□□□□ -0.47
COMMD9-208ENST00000533643 CCDC105Q8IYK2 499 aa12.1□□□□□ -0.47
COMMD9-208ENST00000533643 CHPFQ8IZ52 775 aa12.1□□□□□ -0.47
COMMD9-208ENST00000533643 PCDH20Q8N6Y1 951 aaKnown RBP12.1□□□□□ -0.47
COMMD9-208ENST00000533643 GLIS1Q8NBF1 620 aa12.1□□□□□ -0.47
COMMD9-208ENST00000533643 MNS1Q8NEH6 495 aa12.1□□□□□ -0.47
COMMD9-208ENST00000533643 RPLP0P6Q8NHW5 317 aa12.1□□□□□ -0.47
COMMD9-208ENST00000533643 CCDC110Q8TBZ0 833 aa12.1□□□□□ -0.47
COMMD9-208ENST00000533643 PTPRN2Q92932 1015 aa12.1□□□□□ -0.47
COMMD9-208ENST00000533643 CLDN23Q96B33 292 aa12.1□□□□□ -0.47
COMMD9-208ENST00000533643 CCDC114Q96M63 670 aa12.1□□□□□ -0.47
COMMD9-208ENST00000533643 KRT12Q99456 494 aa12.1□□□□□ -0.47
COMMD9-208ENST00000533643 VAT1Q99536 393 aa12.1□□□□□ -0.47
COMMD9-208ENST00000533643 GABRG3Q99928 467 aa12.1□□□□□ -0.47
COMMD9-208ENST00000533643 FERMT1Q9BQL6 677 aa12.1□□□□□ -0.47
COMMD9-208ENST00000533643 MGME1Q9BQP7 344 aa12.1□□□□□ -0.47
COMMD9-208ENST00000533643 GLOD4Q9HC38 313 aa12.1□□□□□ -0.47
COMMD9-208ENST00000533643 SUN2Q9UH99 717 aa12.1□□□□□ -0.47
COMMD9-208ENST00000533643 AMACRQ9UHK6 382 aa12.1□□□□□ -0.47
COMMD9-208ENST00000533643 SLC8A2Q9UPR5 921 aa12.1□□□□□ -0.47
COMMD9-208ENST00000533643 NEU2Q9Y3R4 380 aa12.1□□□□□ -0.47
COMMD9-208ENST00000533643 MUC22E2RYF6 1773 aaPredicted RBP12.1□□□□□ -0.47
COMMD9-208ENST00000533643 TTC24A2A3L6 582 aaPredicted RBP12.09□□□□□ -0.47
COMMD9-208ENST00000533643 TMEM221A6NGB7 291 aa12.09□□□□□ -0.47
COMMD9-208ENST00000533643 M0R296 226 aa12.09□□□□□ -0.47
COMMD9-208ENST00000533643 OPHN1O60890 802 aa12.09□□□□□ -0.47
COMMD9-208ENST00000533643 GJB3O75712 270 aa12.09□□□□□ -0.47
COMMD9-208ENST00000533643 NEBLO76041 1014 aa12.09□□□□□ -0.47
COMMD9-208ENST00000533643 STK10O94804 968 aaKnown RBP12.09□□□□□ -0.47
COMMD9-208ENST00000533643 GSRP00390 522 aa12.09□□□□□ -0.47
COMMD9-208ENST00000533643 IFNB1P01574 187 aa12.09□□□□□ -0.47
COMMD9-208ENST00000533643 ZSCAN5DPP0CG00 497 aa12.09□□□□□ -0.47
COMMD9-208ENST00000533643 HSPA9P38646 679 aaKnown RBP12.09□□□□□ -0.47
COMMD9-208ENST00000533643 CSNK1DP48730 415 aa12.09□□□□□ -0.47
COMMD9-208ENST00000533643 MAXP61244 160 aa12.09□□□□□ -0.47
COMMD9-208ENST00000533643 LMNB2Q03252 620 aa12.09□□□□□ -0.47
COMMD9-208ENST00000533643 ITKQ08881 620 aa12.09□□□□□ -0.47
COMMD9-208ENST00000533643 NIPAL4Q0D2K0 466 aa12.09□□□□□ -0.47
COMMD9-208ENST00000533643 HSF5Q4G112 596 aaPredicted RBP12.09□□□□□ -0.47
COMMD9-208ENST00000533643 CARD16Q5EG05 197 aa12.09□□□□□ -0.47
COMMD9-208ENST00000533643 ALG1LQ6GMV1 187 aa12.09□□□□□ -0.47
COMMD9-208ENST00000533643 SDE2Q6IQ49 451 aa12.09□□□□□ -0.47
COMMD9-208ENST00000533643 DPY19L3Q6ZPD9 716 aa12.09□□□□□ -0.47
COMMD9-208ENST00000533643 GSTA5Q7RTV2 222 aa12.09□□□□□ -0.47
COMMD9-208ENST00000533643 PID1Q7Z2X4 250 aa12.09□□□□□ -0.47
COMMD9-208ENST00000533643 SRLQ86TD4 932 aa12.09□□□□□ -0.47
COMMD9-208ENST00000533643 PLPP6Q8IY26 295 aa12.09□□□□□ -0.47
COMMD9-208ENST00000533643 BBS5Q8N3I7 341 aa12.09□□□□□ -0.47
COMMD9-208ENST00000533643 TXNDC5Q8NBS9 432 aaKnown RBP12.09□□□□□ -0.47
COMMD9-208ENST00000533643 FLCNQ8NFG4 579 aa12.09□□□□□ -0.47
COMMD9-208ENST00000533643 OR2A12Q8NGT7 310 aa12.09□□□□□ -0.47
COMMD9-208ENST00000533643 ARRDC2Q8TBH0 407 aa12.09□□□□□ -0.47
COMMD9-208ENST00000533643 EXOC2Q96KP1 924 aa12.09□□□□□ -0.47
COMMD9-208ENST00000533643 NSMCE3Q96MG7 304 aa12.09□□□□□ -0.47
COMMD9-208ENST00000533643 SPATA13Q96N96 652 aa12.09□□□□□ -0.47
COMMD9-208ENST00000533643 CARD6Q9BX69 1037 aa12.09□□□□□ -0.47
COMMD9-208ENST00000533643 TM6SF2Q9BZW4 377 aa12.09□□□□□ -0.47
COMMD9-208ENST00000533643 MFSD1Q9H3U5 465 aa12.09□□□□□ -0.47
COMMD9-208ENST00000533643 POLR3BQ9NW08 1133 aaPredicted RBP12.09□□□□□ -0.47
COMMD9-208ENST00000533643 KLHL8Q9P2G9 620 aaPredicted RBP12.09□□□□□ -0.47
COMMD9-208ENST00000533643 HECAQ9UBI9 543 aaPredicted RBP12.09□□□□□ -0.47
COMMD9-208ENST00000533643 FEZ2Q9UHY8 353 aaPredicted RBP12.09□□□□□ -0.47
COMMD9-208ENST00000533643 MMP17Q9ULZ9 603 aa12.09□□□□□ -0.47
COMMD9-208ENST00000533643 SIT1Q9Y3P8 196 aa12.09□□□□□ -0.47
COMMD9-208ENST00000533643 A0A1W2PQF6 199 aa12.08□□□□□ -0.48
COMMD9-208ENST00000533643 TARSL2A2RTX5 802 aaKnown RBP12.08□□□□□ -0.48
COMMD9-208ENST00000533643 CTAGE15A4D2H0 777 aa12.08□□□□□ -0.48
COMMD9-208ENST00000533643 CHURC1-FNTBB4DL54 471 aa12.08□□□□□ -0.48
COMMD9-208ENST00000533643 INSIG1O15503 277 aa12.08□□□□□ -0.48
COMMD9-208ENST00000533643 BNIP3LO60238 219 aa12.08□□□□□ -0.48
COMMD9-208ENST00000533643 SIN3BO75182 1162 aa12.08□□□□□ -0.48
COMMD9-208ENST00000533643 ECEL1O95672 775 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms