RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 FEM1CQ96JP0 617 aa12.66□□□□□ -0.38
CAPRIN1-213ENST00000533562 SELENOOQ9BVL4 669 aa12.66□□□□□ -0.38
CAPRIN1-213ENST00000533562 MAGEH1Q9H213 219 aa12.66□□□□□ -0.38
CAPRIN1-213ENST00000533562 SEPT11Q9NVA2 429 aaKnown RBP12.66□□□□□ -0.38
CAPRIN1-213ENST00000533562 PTPRBP23467 1997 aa12.66□□□□□ -0.38
CAPRIN1-213ENST00000533562 DOCK9Q9BZ29 2069 aa12.66□□□□□ -0.38
CAPRIN1-213ENST00000533562 PLXNB3Q9ULL4 1909 aa12.66□□□□□ -0.38
CAPRIN1-213ENST00000533562 NYNRINQ9P2P1 1898 aaKnown RBP12.65□□□□□ -0.38
CAPRIN1-213ENST00000533562 TRABD2BA6NFA1 517 aa12.65□□□□□ -0.38
CAPRIN1-213ENST00000533562 SIGLEC16A6NMB1 481 aa12.65□□□□□ -0.38
CAPRIN1-213ENST00000533562 THEGLP0DJG4 465 aa12.65□□□□□ -0.38
CAPRIN1-213ENST00000533562 DESP17661 470 aa12.65□□□□□ -0.38
CAPRIN1-213ENST00000533562 GPD1P21695 349 aa12.65□□□□□ -0.38
CAPRIN1-213ENST00000533562 HNRNPA2B1P22626 353 aaKnown RBP12.65□□□□□ -0.38
CAPRIN1-213ENST00000533562 ITGB7P26010 798 aa12.65□□□□□ -0.38
CAPRIN1-213ENST00000533562 L1CAMP32004 1257 aa12.65□□□□□ -0.38
CAPRIN1-213ENST00000533562 NEK3P51956 506 aa12.65□□□□□ -0.38
CAPRIN1-213ENST00000533562 RPS21P63220 83 aaKnown RBP12.65□□□□□ -0.38
CAPRIN1-213ENST00000533562 ARF5P84085 180 aa12.65□□□□□ -0.38
CAPRIN1-213ENST00000533562 PTP4A2Q12974 167 aa12.65□□□□□ -0.38
CAPRIN1-213ENST00000533562 POLD3Q15054 466 aaPredicted RBP12.65□□□□□ -0.38
CAPRIN1-213ENST00000533562 HS1BP3Q53T59 392 aa12.65□□□□□ -0.38
CAPRIN1-213ENST00000533562 DHRS13Q6UX07 377 aa12.65□□□□□ -0.38
CAPRIN1-213ENST00000533562 SLFN11Q7Z7L1 901 aa12.65□□□□□ -0.38
CAPRIN1-213ENST00000533562 PDCD7Q8N8D1 485 aaKnown RBP12.65□□□□□ -0.38
CAPRIN1-213ENST00000533562 TMEM145Q8NBT3 493 aa12.65□□□□□ -0.38
CAPRIN1-213ENST00000533562 C3orf20Q8ND61 904 aa12.65□□□□□ -0.38
CAPRIN1-213ENST00000533562 JOSD2Q8TAC2 188 aa12.65□□□□□ -0.38
CAPRIN1-213ENST00000533562 KLK6Q92876 244 aa12.65□□□□□ -0.38
CAPRIN1-213ENST00000533562 ARHGEF2Q92974 986 aaKnown RBP12.65□□□□□ -0.38
CAPRIN1-213ENST00000533562 TBC1D31Q96DN5 1066 aa12.65□□□□□ -0.38
CAPRIN1-213ENST00000533562 LRIG1Q96JA1 1093 aa12.65□□□□□ -0.38
CAPRIN1-213ENST00000533562 ERGIC2Q96RQ1 377 aa12.65□□□□□ -0.38
CAPRIN1-213ENST00000533562 PCDHB18PQ96TA0 734 aa12.65□□□□□ -0.38
CAPRIN1-213ENST00000533562 AGPAT1Q99943 283 aa12.65□□□□□ -0.38
CAPRIN1-213ENST00000533562 NAT10Q9H0A0 1025 aaKnown RBP12.65□□□□□ -0.38
CAPRIN1-213ENST00000533562 KLHL11Q9NVR0 708 aa12.65□□□□□ -0.38
CAPRIN1-213ENST00000533562 TMEM248Q9NWD8 314 aa12.65□□□□□ -0.38
CAPRIN1-213ENST00000533562 HECAQ9UBI9 543 aaPredicted RBP12.65□□□□□ -0.38
CAPRIN1-213ENST00000533562 DNAI1Q9UI46 699 aa12.65□□□□□ -0.38
CAPRIN1-213ENST00000533562 FCF1Q9Y324 198 aaKnown RBP12.65□□□□□ -0.38
CAPRIN1-213ENST00000533562 WASF2Q9Y6W5 498 aa12.65□□□□□ -0.38
CAPRIN1-213ENST00000533562 ATRXP46100 2492 aa12.65□□□□□ -0.38
CAPRIN1-213ENST00000533562 TRPM6Q9BX84 2022 aa12.64□□□□□ -0.39
CAPRIN1-213ENST00000533562 ZSCAN5CA6NGD5 496 aaPredicted RBP12.64□□□□□ -0.39
CAPRIN1-213ENST00000533562 RAMP2O60895 175 aa12.64□□□□□ -0.39
CAPRIN1-213ENST00000533562 RFPL3O75679 317 aa12.64□□□□□ -0.39
CAPRIN1-213ENST00000533562 LRIG2O94898 1065 aa12.64□□□□□ -0.39
CAPRIN1-213ENST00000533562 MBD3O95983 291 aa12.64□□□□□ -0.39
CAPRIN1-213ENST00000533562 ADRB3P13945 408 aa12.64□□□□□ -0.39
CAPRIN1-213ENST00000533562 JUPP14923 745 aa12.64□□□□□ -0.39
CAPRIN1-213ENST00000533562 PRLRP16471 622 aa12.64□□□□□ -0.39
CAPRIN1-213ENST00000533562 CKMT2P17540 419 aa12.64□□□□□ -0.39
CAPRIN1-213ENST00000533562 HNF1BP35680 557 aa12.64□□□□□ -0.39
CAPRIN1-213ENST00000533562 ACVRL1P37023 503 aa12.64□□□□□ -0.39
CAPRIN1-213ENST00000533562 CCNHP51946 323 aaPredicted RBP12.64□□□□□ -0.39
CAPRIN1-213ENST00000533562 HDAC4P56524 1084 aa12.64□□□□□ -0.39
CAPRIN1-213ENST00000533562 ILKQ13418 452 aa12.64□□□□□ -0.39
CAPRIN1-213ENST00000533562 RAB6CQ53S08 254 aa12.64□□□□□ -0.39
CAPRIN1-213ENST00000533562 MANEALQ5VSG8 457 aa12.64□□□□□ -0.39
CAPRIN1-213ENST00000533562 SFMBT2Q5VUG0 894 aa12.64□□□□□ -0.39
CAPRIN1-213ENST00000533562 KIAA1161Q6NSJ0 714 aa12.64□□□□□ -0.39
CAPRIN1-213ENST00000533562 SCYL2Q6P3W7 929 aa12.64□□□□□ -0.39
CAPRIN1-213ENST00000533562 WDR59Q6PJI9 974 aa12.64□□□□□ -0.39
CAPRIN1-213ENST00000533562 ZSCAN30Q86W11 494 aa12.64□□□□□ -0.39
CAPRIN1-213ENST00000533562 NLRP14Q86W24 1093 aa12.64□□□□□ -0.39
CAPRIN1-213ENST00000533562 DCP2Q8IU60 420 aaKnown RBP12.64□□□□□ -0.39
CAPRIN1-213ENST00000533562 RYBPQ8N488 228 aaPredicted RBP12.64□□□□□ -0.39
CAPRIN1-213ENST00000533562 MDM1Q8TC05 714 aa12.64□□□□□ -0.39
CAPRIN1-213ENST00000533562 NTAN1Q96AB6 310 aa12.64□□□□□ -0.39
CAPRIN1-213ENST00000533562 RAB7BQ96AH8 199 aa12.64□□□□□ -0.39
CAPRIN1-213ENST00000533562 SLC17A9Q9BYT1 436 aa12.64□□□□□ -0.39
CAPRIN1-213ENST00000533562 RAB6CQ9H0N0 254 aa12.64□□□□□ -0.39
CAPRIN1-213ENST00000533562 NDFIP2Q9NV92 336 aa12.64□□□□□ -0.39
CAPRIN1-213ENST00000533562 DKK4Q9UBT3 224 aa12.64□□□□□ -0.39
CAPRIN1-213ENST00000533562 CA5BQ9Y2D0 317 aa12.64□□□□□ -0.39
CAPRIN1-213ENST00000533562 HS3ST3A1Q9Y663 406 aa12.64□□□□□ -0.39
CAPRIN1-213ENST00000533562 COL5A1P20908 1838 aaPredicted RBP12.63□□□□□ -0.39
CAPRIN1-213ENST00000533562 FAM149AA5PLN7 773 aa12.63□□□□□ -0.39
CAPRIN1-213ENST00000533562 FAM72CH0Y354 149 aa12.63□□□□□ -0.39
CAPRIN1-213ENST00000533562 RNF103O00237 685 aa12.63□□□□□ -0.39
CAPRIN1-213ENST00000533562 AP1G1O43747 822 aa12.63□□□□□ -0.39
CAPRIN1-213ENST00000533562 GJB6O95452 261 aa12.63□□□□□ -0.39
CAPRIN1-213ENST00000533562 POP4O95707 220 aaKnown RBP12.63□□□□□ -0.39
CAPRIN1-213ENST00000533562 CD160O95971 181 aa12.63□□□□□ -0.39
CAPRIN1-213ENST00000533562 ZNF143P52747 638 aaPredicted RBP12.63□□□□□ -0.39
CAPRIN1-213ENST00000533562 AIF1P55008 147 aa12.63□□□□□ -0.39
CAPRIN1-213ENST00000533562 SNRPD1P62314 119 aaKnown RBP12.63□□□□□ -0.39
CAPRIN1-213ENST00000533562 DNAJC3Q13217 504 aa12.63□□□□□ -0.39
CAPRIN1-213ENST00000533562 SGCGQ13326 291 aa12.63□□□□□ -0.39
CAPRIN1-213ENST00000533562 ZNF211Q13398 564 aaPredicted RBP12.63□□□□□ -0.39
CAPRIN1-213ENST00000533562 TMEM259Q4ZIN3 620 aa12.63□□□□□ -0.39
CAPRIN1-213ENST00000533562 EFHC2Q5JST6 749 aa12.63□□□□□ -0.39
CAPRIN1-213ENST00000533562 CCDC183Q5T5S1 534 aa12.63□□□□□ -0.39
CAPRIN1-213ENST00000533562 FAM72AQ5TYM5 149 aa12.63□□□□□ -0.39
CAPRIN1-213ENST00000533562 FAM72DQ6L9T8 149 aa12.63□□□□□ -0.39
CAPRIN1-213ENST00000533562 PPP1R2P3Q6NXS1 205 aa12.63□□□□□ -0.39
CAPRIN1-213ENST00000533562 DNAJC24Q6P3W2 148 aa12.63□□□□□ -0.39
CAPRIN1-213ENST00000533562 FAM72BQ86X60 149 aa12.63□□□□□ -0.39
CAPRIN1-213ENST00000533562 ZNF354CQ86Y25 554 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms