RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 RPRD1AQ96P16 312 aaPredicted RBP8.93□□□□□ -0.98
COPB1-210ENST00000533533 SYT11Q9BT88 431 aa8.93□□□□□ -0.98
COPB1-210ENST00000533533 NRSN2Q9GZP1 204 aa8.93□□□□□ -0.98
COPB1-210ENST00000533533 PRORYQ9H606 182 aa8.93□□□□□ -0.98
COPB1-210ENST00000533533 ERVMER34-1Q9H9K5 563 aa8.93□□□□□ -0.98
COPB1-210ENST00000533533 PARVAQ9NVD7 372 aa8.93□□□□□ -0.98
COPB1-210ENST00000533533 CNOT8Q9UFF9 292 aaKnown RBP8.93□□□□□ -0.98
COPB1-210ENST00000533533 SLCO3A1Q9UIG8 710 aa8.93□□□□□ -0.98
COPB1-210ENST00000533533 VANGL2Q9ULK5 521 aa8.93□□□□□ -0.98
COPB1-210ENST00000533533 SNX10Q9Y5X0 201 aa8.93□□□□□ -0.98
COPB1-210ENST00000533533 TLN1Q9Y490 2541 aaKnown RBP8.93□□□□□ -0.98
COPB1-210ENST00000533533 KIF26BQ2KJY2 2108 aa8.92□□□□□ -0.98
COPB1-210ENST00000533533 A0A087X0T9 212 aa8.92□□□□□ -0.98
COPB1-210ENST00000533533 C2CD4BA6NLJ0 364 aa8.92□□□□□ -0.98
COPB1-210ENST00000533533 SNPHO15079 494 aa8.92□□□□□ -0.98
COPB1-210ENST00000533533 ATXN7O15265 892 aaPredicted RBP8.92□□□□□ -0.98
COPB1-210ENST00000533533 RRP8O43159 456 aaKnown RBP8.92□□□□□ -0.98
COPB1-210ENST00000533533 CCP110O43303 1012 aa8.92□□□□□ -0.98
COPB1-210ENST00000533533 AKR1B10O60218 316 aa8.92□□□□□ -0.98
COPB1-210ENST00000533533 SRGAP2O75044 1071 aa8.92□□□□□ -0.98
COPB1-210ENST00000533533 MFAP3LO75121 409 aa8.92□□□□□ -0.98
COPB1-210ENST00000533533 PAGE1O75459 146 aa8.92□□□□□ -0.98
COPB1-210ENST00000533533 LUC7L3O95232 432 aaKnown RBP8.92□□□□□ -0.98
COPB1-210ENST00000533533 ZIC2O95409 532 aaPredicted RBP8.92□□□□□ -0.98
COPB1-210ENST00000533533 ADCY5O95622 1261 aa8.92□□□□□ -0.98
COPB1-210ENST00000533533 ADH1BP00325 375 aa8.92□□□□□ -0.98
COPB1-210ENST00000533533 FAM228BP0C875 321 aa8.92□□□□□ -0.98
COPB1-210ENST00000533533 GZMAP12544 262 aa8.92□□□□□ -0.98
COPB1-210ENST00000533533 PSMA2P25787 234 aa8.92□□□□□ -0.98
COPB1-210ENST00000533533 CXCR3P49682 368 aa8.92□□□□□ -0.98
COPB1-210ENST00000533533 NUMBP49757 651 aa8.92□□□□□ -0.98
COPB1-210ENST00000533533 RPL7AP62424 266 aaKnown RBP8.92□□□□□ -0.98
COPB1-210ENST00000533533 PPP2CBP62714 309 aa8.92□□□□□ -0.98
COPB1-210ENST00000533533 PPP2CAP67775 309 aa8.92□□□□□ -0.98
COPB1-210ENST00000533533 BNIP3Q12983 259 aa8.92□□□□□ -0.98
COPB1-210ENST00000533533 ILKQ13418 452 aa8.92□□□□□ -0.98
COPB1-210ENST00000533533 ELAVL3Q14576 367 aaKnown RBP8.92□□□□□ -0.98
COPB1-210ENST00000533533 ARL13BQ3SXY8 428 aa8.92□□□□□ -0.98
COPB1-210ENST00000533533 CCDC14Q49A88 953 aa8.92□□□□□ -0.98
COPB1-210ENST00000533533 RAB6CQ53S08 254 aa8.92□□□□□ -0.98
COPB1-210ENST00000533533 SLC45A4Q5BKX6 768 aa8.92□□□□□ -0.98
COPB1-210ENST00000533533 BRMS1LQ5PSV4 323 aa8.92□□□□□ -0.98
COPB1-210ENST00000533533 OTUD1Q5VV17 481 aaPredicted RBP8.92□□□□□ -0.98
COPB1-210ENST00000533533 RNF219Q5W0B1 726 aaPredicted RBP8.92□□□□□ -0.98
COPB1-210ENST00000533533 LRRC31Q6UY01 552 aa8.92□□□□□ -0.98
COPB1-210ENST00000533533 CNGA4Q8IV77 575 aa8.92□□□□□ -0.98
COPB1-210ENST00000533533 APCDD1Q8J025 514 aa8.92□□□□□ -0.98
COPB1-210ENST00000533533 STK40Q8N2I9 435 aa8.92□□□□□ -0.98
COPB1-210ENST00000533533 OXR1Q8N573 874 aa8.92□□□□□ -0.98
COPB1-210ENST00000533533 MFSD2AQ8NA29 543 aa8.92□□□□□ -0.98
COPB1-210ENST00000533533 SNIP1Q8TAD8 396 aaKnown RBP8.92□□□□□ -0.98
COPB1-210ENST00000533533 FAM172AQ8WUF8 416 aa8.92□□□□□ -0.98
COPB1-210ENST00000533533 PTPRN2Q92932 1015 aa8.92□□□□□ -0.98
COPB1-210ENST00000533533 TRIM11Q96F44 468 aa8.92□□□□□ -0.98
COPB1-210ENST00000533533 VCPIP1Q96JH7 1222 aa8.92□□□□□ -0.98
COPB1-210ENST00000533533 RPL10LQ96L21 214 aaKnown RBP8.92□□□□□ -0.98
COPB1-210ENST00000533533 RAB6CQ9H0N0 254 aa8.92□□□□□ -0.98
COPB1-210ENST00000533533 TMPRSS4Q9NRS4 437 aa8.92□□□□□ -0.98
COPB1-210ENST00000533533 ABHD10Q9NUJ1 306 aa8.92□□□□□ -0.98
COPB1-210ENST00000533533 ARHGAP20Q9P2F6 1191 aa8.92□□□□□ -0.98
COPB1-210ENST00000533533 RAI2Q9Y5P3 530 aa8.92□□□□□ -0.98
COPB1-210ENST00000533533 HS3ST4Q9Y661 456 aa8.92□□□□□ -0.98
COPB1-210ENST00000533533 PTPN13Q12923 2485 aa8.91□□□□□ -0.98
COPB1-210ENST00000533533 TBC1D3DA0A087WVF3 549 aa8.91□□□□□ -0.98
COPB1-210ENST00000533533 TBC1D3IA0A087WXS9 549 aa8.91□□□□□ -0.98
COPB1-210ENST00000533533 TBC1D3EA0A087X179 549 aa8.91□□□□□ -0.98
COPB1-210ENST00000533533 TBC1D3KA0A087X1G2 549 aa8.91□□□□□ -0.98
COPB1-210ENST00000533533 TBC1D3FA6NER0 549 aaPredicted RBP8.91□□□□□ -0.98
COPB1-210ENST00000533533 TBC1D3LB9A6J9 549 aa8.91□□□□□ -0.98
COPB1-210ENST00000533533 C1QL1O75973 258 aa8.91□□□□□ -0.98
COPB1-210ENST00000533533 IL1BP01584 269 aa8.91□□□□□ -0.98
COPB1-210ENST00000533533 TBC1D3HP0C7X1 549 aa8.91□□□□□ -0.98
COPB1-210ENST00000533533 CKMT2P17540 419 aa8.91□□□□□ -0.98
COPB1-210ENST00000533533 MZF1P28698 734 aaPredicted RBP8.91□□□□□ -0.98
COPB1-210ENST00000533533 DRD3P35462 400 aa8.91□□□□□ -0.98
COPB1-210ENST00000533533 NNMTP40261 264 aa8.91□□□□□ -0.98
COPB1-210ENST00000533533 PTPN9P43378 593 aa8.91□□□□□ -0.98
COPB1-210ENST00000533533 STK19P49842 368 aaPredicted RBP8.91□□□□□ -0.98
COPB1-210ENST00000533533 ZNF143P52747 638 aaPredicted RBP8.91□□□□□ -0.98
COPB1-210ENST00000533533 GSCP56915 257 aaPredicted RBP8.91□□□□□ -0.98
COPB1-210ENST00000533533 OVGP1Q12889 678 aa8.91□□□□□ -0.98
COPB1-210ENST00000533533 MTA1Q13330 715 aa8.91□□□□□ -0.98
COPB1-210ENST00000533533 MAMLD1Q13495 774 aa8.91□□□□□ -0.98
COPB1-210ENST00000533533 EIF4EBP2Q13542 120 aaPredicted RBP8.91□□□□□ -0.98
COPB1-210ENST00000533533 AUHQ13825 339 aaKnown RBP8.91□□□□□ -0.98
COPB1-210ENST00000533533 TBC1D3GQ6DHY5 549 aa8.91□□□□□ -0.98
COPB1-210ENST00000533533 TBC1D3CQ6IPX1 549 aa8.91□□□□□ -0.98
COPB1-210ENST00000533533 NAPEPLDQ6IQ20 393 aa8.91□□□□□ -0.98
COPB1-210ENST00000533533 FBXL22Q6P050 247 aa8.91□□□□□ -0.98
COPB1-210ENST00000533533 ALKBH5Q6P6C2 394 aaKnown RBP8.91□□□□□ -0.98
COPB1-210ENST00000533533 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.91□□□□□ -0.98
COPB1-210ENST00000533533 ARCQ7LC44 396 aa8.91□□□□□ -0.98
COPB1-210ENST00000533533 KANSL1Q7Z3B3 1105 aa8.91□□□□□ -0.98
COPB1-210ENST00000533533 C14orf80Q86SX3 495 aa8.91□□□□□ -0.98
COPB1-210ENST00000533533 PRPF39Q86UA1 669 aaKnown RBP8.91□□□□□ -0.98
COPB1-210ENST00000533533 IQCHQ86VS3 1027 aa8.91□□□□□ -0.98
COPB1-210ENST00000533533 SPATS2Q86XZ4 545 aaKnown RBP8.91□□□□□ -0.98
COPB1-210ENST00000533533 TBC1D3Q8IZP1 549 aaPredicted RBP8.91□□□□□ -0.98
COPB1-210ENST00000533533 CACTIN-AS1Q8N1I8 211 aa8.91□□□□□ -0.98
COPB1-210ENST00000533533 LSM14AQ8ND56 463 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms