RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 SKIDA1Q1XH10 827 aa7.97□□□□□ -1.13
NXF1-215ENST00000533440 FBXL22Q6P050 247 aa7.97□□□□□ -1.13
NXF1-215ENST00000533440 VASH2Q86V25 355 aa7.97□□□□□ -1.13
NXF1-215ENST00000533440 ZSCAN30Q86W11 494 aa7.97□□□□□ -1.13
NXF1-215ENST00000533440 PTRH1Q86Y79 214 aaKnown RBP7.97□□□□□ -1.13
NXF1-215ENST00000533440 RBFAQ8N0V3 343 aa7.97□□□□□ -1.13
NXF1-215ENST00000533440 GUF1Q8N442 669 aaKnown RBP7.97□□□□□ -1.13
NXF1-215ENST00000533440 FAM26EQ8N5C1 309 aa7.97□□□□□ -1.13
NXF1-215ENST00000533440 ZSCAN1Q8NBB4 408 aa7.97□□□□□ -1.13
NXF1-215ENST00000533440 CHST14Q8NCH0 376 aa7.97□□□□□ -1.13
NXF1-215ENST00000533440 ASB12Q8WXK4 309 aa7.97□□□□□ -1.13
NXF1-215ENST00000533440 RNF34Q969K3 372 aa7.97□□□□□ -1.13
NXF1-215ENST00000533440 FAM149B1Q96BN6 582 aa7.97□□□□□ -1.13
NXF1-215ENST00000533440 FEM1CQ96JP0 617 aa7.97□□□□□ -1.13
NXF1-215ENST00000533440 CCDC114Q96M63 670 aa7.97□□□□□ -1.13
NXF1-215ENST00000533440 LRRC61Q9BV99 259 aa7.97□□□□□ -1.13
NXF1-215ENST00000533440 TRIM62Q9BVG3 475 aa7.97□□□□□ -1.13
NXF1-215ENST00000533440 C1QTNF2Q9BXJ5 285 aa7.97□□□□□ -1.13
NXF1-215ENST00000533440 STRADBQ9C0K7 418 aa7.97□□□□□ -1.13
NXF1-215ENST00000533440 CLPBQ9H078 707 aa7.97□□□□□ -1.13
NXF1-215ENST00000533440 TCEAL2Q9H3H9 227 aaPredicted RBP7.97□□□□□ -1.13
NXF1-215ENST00000533440 EPB41L5Q9HCM4 733 aa7.97□□□□□ -1.13
NXF1-215ENST00000533440 APOBEC3BQ9UH17 382 aaKnown RBP7.97□□□□□ -1.13
NXF1-215ENST00000533440 IPO11Q9UI26 975 aaKnown RBP7.97□□□□□ -1.13
NXF1-215ENST00000533440 RABGEF1Q9UJ41 708 aa7.97□□□□□ -1.13
NXF1-215ENST00000533440 VPS28Q9UK41 221 aa7.97□□□□□ -1.13
NXF1-215ENST00000533440 PNMA8BQ9ULN7 279 aaPredicted RBP7.97□□□□□ -1.13
NXF1-215ENST00000533440 PADI4Q9UM07 663 aa7.97□□□□□ -1.13
NXF1-215ENST00000533440 TBC1D30Q9Y2I9 924 aa7.97□□□□□ -1.13
NXF1-215ENST00000533440 FADS3Q9Y5Q0 445 aa7.97□□□□□ -1.13
NXF1-215ENST00000533440 SPTBN1Q01082 2364 aaKnown RBP7.97□□□□□ -1.13
NXF1-215ENST00000533440 CREBBPQ92793 2442 aa7.96□□□□□ -1.14
NXF1-215ENST00000533440 A0A1W2PQ27 194 aa7.96□□□□□ -1.14
NXF1-215ENST00000533440 A0A1W2PQ64 194 aa7.96□□□□□ -1.14
NXF1-215ENST00000533440 A0A1W2PQC6 194 aa7.96□□□□□ -1.14
NXF1-215ENST00000533440 A0A1W2PQM1 296 aa7.96□□□□□ -1.14
NXF1-215ENST00000533440 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.96□□□□□ -1.14
NXF1-215ENST00000533440 K7ERQ8 282 aa7.96□□□□□ -1.14
NXF1-215ENST00000533440 YY2O15391 372 aa7.96□□□□□ -1.14
NXF1-215ENST00000533440 SMAD6O43541 496 aaKnown RBP7.96□□□□□ -1.14
NXF1-215ENST00000533440 CLDN11O75508 207 aa7.96□□□□□ -1.14
NXF1-215ENST00000533440 ANXA6P08133 673 aa7.96□□□□□ -1.14
NXF1-215ENST00000533440 JMJD7P0C870 316 aa7.96□□□□□ -1.14
NXF1-215ENST00000533440 ADRB3P13945 408 aa7.96□□□□□ -1.14
NXF1-215ENST00000533440 TBXAS1P24557 533 aaPredicted RBP7.96□□□□□ -1.14
NXF1-215ENST00000533440 GPD2P43304 727 aa7.96□□□□□ -1.14
NXF1-215ENST00000533440 IRAK1P51617 712 aa7.96□□□□□ -1.14
NXF1-215ENST00000533440 NEK3P51956 506 aa7.96□□□□□ -1.14
NXF1-215ENST00000533440 PITX1P78337 314 aaPredicted RBP7.96□□□□□ -1.14
NXF1-215ENST00000533440 CCL7P80098 99 aa7.96□□□□□ -1.14
NXF1-215ENST00000533440 CENPCQ03188 943 aa7.96□□□□□ -1.14
NXF1-215ENST00000533440 C1orf61Q13536 156 aa7.96□□□□□ -1.14
NXF1-215ENST00000533440 AUHQ13825 339 aaKnown RBP7.96□□□□□ -1.14
NXF1-215ENST00000533440 EDRF1Q3B7T1 1238 aa7.96□□□□□ -1.14
NXF1-215ENST00000533440 C5orf22Q49AR2 442 aa7.96□□□□□ -1.14
NXF1-215ENST00000533440 PRRT3Q5FWE3 981 aa7.96□□□□□ -1.14
NXF1-215ENST00000533440 ARSIQ5FYB1 569 aa7.96□□□□□ -1.14
NXF1-215ENST00000533440 ESRP1Q6NXG1 681 aaKnown RBP7.96□□□□□ -1.14
NXF1-215ENST00000533440 TMEM270Q6UE05 265 aa7.96□□□□□ -1.14
NXF1-215ENST00000533440 ZFAND4Q86XD8 727 aa7.96□□□□□ -1.14
NXF1-215ENST00000533440 PHACTR4Q8IZ21 702 aa7.96□□□□□ -1.14
NXF1-215ENST00000533440 ARL10Q8N8L6 244 aa7.96□□□□□ -1.14
NXF1-215ENST00000533440 ATP11CQ8NB49 1132 aa7.96□□□□□ -1.14
NXF1-215ENST00000533440 DENND6BQ8NEG7 585 aa7.96□□□□□ -1.14
NXF1-215ENST00000533440 INTS4Q96HW7 963 aaKnown RBP7.96□□□□□ -1.14
NXF1-215ENST00000533440 PPP1R16AQ96I34 528 aa7.96□□□□□ -1.14
NXF1-215ENST00000533440 PPP1R13BQ96KQ4 1090 aa7.96□□□□□ -1.14
NXF1-215ENST00000533440 TMEM74Q96NL1 305 aa7.96□□□□□ -1.14
NXF1-215ENST00000533440 RPRD1AQ96P16 312 aaPredicted RBP7.96□□□□□ -1.14
NXF1-215ENST00000533440 GFM1Q96RP9 751 aaKnown RBP7.96□□□□□ -1.14
NXF1-215ENST00000533440 PSMB7Q99436 277 aa7.96□□□□□ -1.14
NXF1-215ENST00000533440 SLC12A9Q9BXP2 914 aa7.96□□□□□ -1.14
NXF1-215ENST00000533440 FOXP3Q9BZS1 431 aa7.96□□□□□ -1.14
NXF1-215ENST00000533440 SYNDIG1Q9H7V2 258 aa7.96□□□□□ -1.14
NXF1-215ENST00000533440 POPDC2Q9HBU9 364 aa7.96□□□□□ -1.14
NXF1-215ENST00000533440 PISDQ9UG56 409 aa7.96□□□□□ -1.14
NXF1-215ENST00000533440 IL36AQ9UHA7 158 aa7.96□□□□□ -1.14
NXF1-215ENST00000533440 SLC12A6Q9UHW9 1150 aa7.96□□□□□ -1.14
NXF1-215ENST00000533440 TUBD1Q9UJT1 453 aa7.96□□□□□ -1.14
NXF1-215ENST00000533440 MAPK8IP1Q9UQF2 711 aa7.96□□□□□ -1.14
NXF1-215ENST00000533440 LOXL2Q9Y4K0 774 aa7.96□□□□□ -1.14
NXF1-215ENST00000533440 WASF2Q9Y6W5 498 aa7.96□□□□□ -1.14
NXF1-215ENST00000533440 PRAMEF33A0A0G2JMD5 474 aa7.95□□□□□ -1.14
NXF1-215ENST00000533440 BLACEA4D250 179 aa7.95□□□□□ -1.14
NXF1-215ENST00000533440 C9orf172C9J069 976 aa7.95□□□□□ -1.14
NXF1-215ENST00000533440 SNAP91O60641 907 aa7.95□□□□□ -1.14
NXF1-215ENST00000533440 PRAMEF10O60809 474 aa7.95□□□□□ -1.14
NXF1-215ENST00000533440 ZNF821O75541 412 aaPredicted RBP7.95□□□□□ -1.14
NXF1-215ENST00000533440 LEFTY1O75610 366 aa7.95□□□□□ -1.14
NXF1-215ENST00000533440 RPLP0P05388 317 aaKnown RBP7.95□□□□□ -1.14
NXF1-215ENST00000533440 SLC2A3P11169 496 aa7.95□□□□□ -1.14
NXF1-215ENST00000533440 EPB41P11171 864 aaKnown RBP7.95□□□□□ -1.14
NXF1-215ENST00000533440 TSHRP16473 764 aa7.95□□□□□ -1.14
NXF1-215ENST00000533440 ITIH1P19827 911 aa7.95□□□□□ -1.14
NXF1-215ENST00000533440 RRM1P23921 792 aa7.95□□□□□ -1.14
NXF1-215ENST00000533440 BRD2P25440 801 aaKnown RBP7.95□□□□□ -1.14
NXF1-215ENST00000533440 ITGB7P26010 798 aa7.95□□□□□ -1.14
NXF1-215ENST00000533440 CD82P27701 267 aa7.95□□□□□ -1.14
NXF1-215ENST00000533440 L1CAMP32004 1257 aa7.95□□□□□ -1.14
NXF1-215ENST00000533440 ETV5P41161 510 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms