RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 NUMBP49757 651 aa13.21□□□□□ -0.29
TRAPPC4-212ENST00000533058 ZNF135P52742 658 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC4-212ENST00000533058 PDK2Q15119 407 aa13.21□□□□□ -0.29
TRAPPC4-212ENST00000533058 DPYSL2Q16555 572 aa13.21□□□□□ -0.29
TRAPPC4-212ENST00000533058 LRRC38Q5VT99 294 aa13.21□□□□□ -0.29
TRAPPC4-212ENST00000533058 FAM46CQ5VWP2 391 aa13.21□□□□□ -0.29
TRAPPC4-212ENST00000533058 RETSATQ6NUM9 610 aa13.21□□□□□ -0.29
TRAPPC4-212ENST00000533058 RFX8Q6ZV50 586 aa13.21□□□□□ -0.29
TRAPPC4-212ENST00000533058 POLNQ7Z5Q5 900 aa13.21□□□□□ -0.29
TRAPPC4-212ENST00000533058 FAM124AQ86V42 546 aa13.21□□□□□ -0.29
TRAPPC4-212ENST00000533058 CACUL1Q86Y37 369 aa13.21□□□□□ -0.29
TRAPPC4-212ENST00000533058 MMAAQ8IVH4 418 aaKnown RBP13.21□□□□□ -0.29
TRAPPC4-212ENST00000533058 STK40Q8N2I9 435 aa13.21□□□□□ -0.29
TRAPPC4-212ENST00000533058 OR8D1Q8WZ84 308 aa13.21□□□□□ -0.29
TRAPPC4-212ENST00000533058 KDM4CQ9H3R0 1056 aa13.21□□□□□ -0.29
TRAPPC4-212ENST00000533058 PCDH18Q9HCL0 1135 aa13.21□□□□□ -0.29
TRAPPC4-212ENST00000533058 TMEM248Q9NWD8 314 aa13.21□□□□□ -0.29
TRAPPC4-212ENST00000533058 DDX56Q9NY93 547 aaKnown RBP13.21□□□□□ -0.29
TRAPPC4-212ENST00000533058 DNAI1Q9UI46 699 aa13.21□□□□□ -0.29
TRAPPC4-212ENST00000533058 VPS51Q9UID3 782 aa13.21□□□□□ -0.29
TRAPPC4-212ENST00000533058 AMFRQ9UKV5 643 aa13.21□□□□□ -0.29
TRAPPC4-212ENST00000533058 PPM1HQ9ULR3 514 aa13.21□□□□□ -0.29
TRAPPC4-212ENST00000533058 NEU3Q9UQ49 428 aa13.21□□□□□ -0.29
TRAPPC4-212ENST00000533058 BCAT2O15382 392 aaPredicted RBP13.2□□□□□ -0.3
TRAPPC4-212ENST00000533058 SLC7A4O43246 635 aa13.2□□□□□ -0.3
TRAPPC4-212ENST00000533058 MT-CO1P00395 513 aa13.2□□□□□ -0.3
TRAPPC4-212ENST00000533058 VAV1P15498 845 aa13.2□□□□□ -0.3
TRAPPC4-212ENST00000533058 CSRP1P21291 193 aaKnown RBP13.2□□□□□ -0.3
TRAPPC4-212ENST00000533058 MAOBP27338 520 aa13.2□□□□□ -0.3
TRAPPC4-212ENST00000533058 PI4KAP42356 2102 aa13.2□□□□□ -0.3
TRAPPC4-212ENST00000533058 DNA2P51530 1060 aa13.2□□□□□ -0.3
TRAPPC4-212ENST00000533058 GNA12Q03113 381 aa13.2□□□□□ -0.3
TRAPPC4-212ENST00000533058 SEMA3BQ13214 749 aa13.2□□□□□ -0.3
TRAPPC4-212ENST00000533058 ACCSLQ4AC99 568 aa13.2□□□□□ -0.3
TRAPPC4-212ENST00000533058 CCDC50Q8IVM0 306 aa13.2□□□□□ -0.3
TRAPPC4-212ENST00000533058 PLPP6Q8IY26 295 aa13.2□□□□□ -0.3
TRAPPC4-212ENST00000533058 RTL3Q8N8U3 475 aaKnown RBP13.2□□□□□ -0.3
TRAPPC4-212ENST00000533058 ATP11CQ8NB49 1132 aa13.2□□□□□ -0.3
TRAPPC4-212ENST00000533058 BIRC7Q96CA5 298 aa13.2□□□□□ -0.3
TRAPPC4-212ENST00000533058 CCDC114Q96M63 670 aa13.2□□□□□ -0.3
TRAPPC4-212ENST00000533058 OMDQ99983 421 aa13.2□□□□□ -0.3
TRAPPC4-212ENST00000533058 SPON2Q9BUD6 331 aa13.2□□□□□ -0.3
TRAPPC4-212ENST00000533058 MAK16Q9BXY0 300 aaKnown RBP13.2□□□□□ -0.3
TRAPPC4-212ENST00000533058 ACE2Q9BYF1 805 aaPredicted RBP13.2□□□□□ -0.3
TRAPPC4-212ENST00000533058 CEP44Q9C0F1 390 aa13.2□□□□□ -0.3
TRAPPC4-212ENST00000533058 MAGEH1Q9H213 219 aa13.2□□□□□ -0.3
TRAPPC4-212ENST00000533058 NEUROG2Q9H2A3 272 aa13.2□□□□□ -0.3
TRAPPC4-212ENST00000533058 C6orf106Q9H6K1 298 aaPredicted RBP13.2□□□□□ -0.3
TRAPPC4-212ENST00000533058 DNAAF2Q9NVR5 837 aaKnown RBP13.2□□□□□ -0.3
TRAPPC4-212ENST00000533058 DONSONQ9NYP3 566 aa13.2□□□□□ -0.3
TRAPPC4-212ENST00000533058 CWC15Q9P013 229 aaKnown RBP13.2□□□□□ -0.3
TRAPPC4-212ENST00000533058 PYCARDQ9ULZ3 195 aa13.2□□□□□ -0.3
TRAPPC4-212ENST00000533058 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.2□□□□□ -0.3
TRAPPC4-212ENST00000533058 CAPN6Q9Y6Q1 641 aa13.2□□□□□ -0.3
TRAPPC4-212ENST00000533058 CNOT1A5YKK6 2376 aaKnown RBP13.19□□□□□ -0.3
TRAPPC4-212ENST00000533058 A0A1W2PP55 124 aa13.19□□□□□ -0.3
TRAPPC4-212ENST00000533058 MED19A0JLT2 244 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC4-212ENST00000533058 LRRC72A6NJI9 287 aa13.19□□□□□ -0.3
TRAPPC4-212ENST00000533058 WASH4PA8MWX3 477 aa13.19□□□□□ -0.3
TRAPPC4-212ENST00000533058 SNAP91O60641 907 aa13.19□□□□□ -0.3
TRAPPC4-212ENST00000533058 RNASEH2AO75792 299 aaKnown RBP13.19□□□□□ -0.3
TRAPPC4-212ENST00000533058 IL1BP01584 269 aa13.19□□□□□ -0.3
TRAPPC4-212ENST00000533058 CD48P09326 243 aa13.19□□□□□ -0.3
TRAPPC4-212ENST00000533058 ERCC2P18074 760 aa13.19□□□□□ -0.3
TRAPPC4-212ENST00000533058 AMPD1P23109 780 aa13.19□□□□□ -0.3
TRAPPC4-212ENST00000533058 CD27P26842 260 aa13.19□□□□□ -0.3
TRAPPC4-212ENST00000533058 DRD3P35462 400 aa13.19□□□□□ -0.3
TRAPPC4-212ENST00000533058 HCAR3P49019 387 aa13.19□□□□□ -0.3
TRAPPC4-212ENST00000533058 CCR5P51681 352 aa13.19□□□□□ -0.3
TRAPPC4-212ENST00000533058 ATXN3P54252 364 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC4-212ENST00000533058 GEMIN4P57678 1058 aaKnown RBP13.19□□□□□ -0.3
TRAPPC4-212ENST00000533058 MMRN1Q13201 1228 aa13.19□□□□□ -0.3
TRAPPC4-212ENST00000533058 SLC14A1Q13336 389 aa13.19□□□□□ -0.3
TRAPPC4-212ENST00000533058 PPM1JQ5JR12 505 aa13.19□□□□□ -0.3
TRAPPC4-212ENST00000533058 KIAA0895LQ68EN5 471 aa13.19□□□□□ -0.3
TRAPPC4-212ENST00000533058 ZNF662Q6ZS27 426 aa13.19□□□□□ -0.3
TRAPPC4-212ENST00000533058 AADATQ8N5Z0 425 aa13.19□□□□□ -0.3
TRAPPC4-212ENST00000533058 UBL4BQ8N7F7 174 aa13.19□□□□□ -0.3
TRAPPC4-212ENST00000533058 LRRC57Q8N9N7 239 aa13.19□□□□□ -0.3
TRAPPC4-212ENST00000533058 TMIEQ8NEW7 156 aa13.19□□□□□ -0.3
TRAPPC4-212ENST00000533058 OR7D4Q8NG98 312 aa13.19□□□□□ -0.3
TRAPPC4-212ENST00000533058 OR2A12Q8NGT7 310 aa13.19□□□□□ -0.3
TRAPPC4-212ENST00000533058 OR2T34Q8NGX1 318 aa13.19□□□□□ -0.3
TRAPPC4-212ENST00000533058 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC4-212ENST00000533058 GANCQ8TET4 914 aa13.19□□□□□ -0.3
TRAPPC4-212ENST00000533058 RAPGEF5Q92565 580 aa13.19□□□□□ -0.3
TRAPPC4-212ENST00000533058 ISG20Q96AZ6 181 aaKnown RBP13.19□□□□□ -0.3
TRAPPC4-212ENST00000533058 RNF25Q96BH1 459 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC4-212ENST00000533058 TRIM44Q96DX7 344 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC4-212ENST00000533058 CSPG4P5Q96PW8 444 aa13.19□□□□□ -0.3
TRAPPC4-212ENST00000533058 ORAI3Q9BRQ5 295 aa13.19□□□□□ -0.3
TRAPPC4-212ENST00000533058 ATP13A1Q9HD20 1204 aa13.19□□□□□ -0.3
TRAPPC4-212ENST00000533058 SERGEFQ9UGK8 458 aa13.19□□□□□ -0.3
TRAPPC4-212ENST00000533058 EIF2B4Q9UI10 523 aaKnown RBP13.19□□□□□ -0.3
TRAPPC4-212ENST00000533058 FARP1Q9Y4F1 1045 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC4-212ENST00000533058 CACNA1EQ15878 2313 aa13.19□□□□□ -0.3
TRAPPC4-212ENST00000533058 CEP192Q8TEP8 1941 aa13.18□□□□□ -0.3
TRAPPC4-212ENST00000533058 CCDC66A2RUB6 948 aa13.18□□□□□ -0.3
TRAPPC4-212ENST00000533058 C1QTNF3-AMACRE9PGA6 284 aa13.18□□□□□ -0.3
TRAPPC4-212ENST00000533058 CBX4O00257 560 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms