RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 PCDH9Q9HC56 1237 aa14.55□□□□□ -0.08
COL16A1-217ENST00000532877 ARHGEF3Q9NR81 526 aa14.55□□□□□ -0.08
COL16A1-217ENST00000532877 ERVW-1Q9UQF0 538 aa14.55□□□□□ -0.08
COL16A1-217ENST00000532877 NEU2Q9Y3R4 380 aa14.55□□□□□ -0.08
COL16A1-217ENST00000532877 TPRP12270 2363 aaKnown RBP14.54□□□□□ -0.08
COL16A1-217ENST00000532877 C5orf60A6NFR6 353 aa14.54□□□□□ -0.08
COL16A1-217ENST00000532877 K7ERQ8 282 aa14.54□□□□□ -0.08
COL16A1-217ENST00000532877 TIMM44O43615 452 aa14.54□□□□□ -0.08
COL16A1-217ENST00000532877 OPHN1O60890 802 aa14.54□□□□□ -0.08
COL16A1-217ENST00000532877 GCATO75600 419 aa14.54□□□□□ -0.08
COL16A1-217ENST00000532877 HLA-DQB2P05538 268 aa14.54□□□□□ -0.08
COL16A1-217ENST00000532877 SRPRAP08240 638 aaKnown RBP14.54□□□□□ -0.08
COL16A1-217ENST00000532877 ZSCAN5DPP0CG00 497 aa14.54□□□□□ -0.08
COL16A1-217ENST00000532877 SRCP12931 536 aa14.54□□□□□ -0.08
COL16A1-217ENST00000532877 ETS1P14921 441 aa14.54□□□□□ -0.08
COL16A1-217ENST00000532877 SLC20A2Q08357 652 aa14.54□□□□□ -0.08
COL16A1-217ENST00000532877 ZNF235Q14590 738 aa14.54□□□□□ -0.08
COL16A1-217ENST00000532877 PPP1R7Q15435 360 aa14.54□□□□□ -0.08
COL16A1-217ENST00000532877 TRIP13Q15645 432 aaPredicted RBP14.54□□□□□ -0.08
COL16A1-217ENST00000532877 PTPRNQ16849 979 aa14.54□□□□□ -0.08
COL16A1-217ENST00000532877 TEX44Q53QW1 395 aa14.54□□□□□ -0.08
COL16A1-217ENST00000532877 FSTL4Q6MZW2 842 aa14.54□□□□□ -0.08
COL16A1-217ENST00000532877 NUDT18Q6ZVK8 323 aa14.54□□□□□ -0.08
COL16A1-217ENST00000532877 SH2D3CQ8N5H7 860 aa14.54□□□□□ -0.08
COL16A1-217ENST00000532877 CNTD1Q8N815 330 aa14.54□□□□□ -0.08
COL16A1-217ENST00000532877 ATP11CQ8NB49 1132 aa14.54□□□□□ -0.08
COL16A1-217ENST00000532877 CCDC110Q8TBZ0 833 aa14.54□□□□□ -0.08
COL16A1-217ENST00000532877 CASKIN2Q8WXE0 1202 aa14.54□□□□□ -0.08
COL16A1-217ENST00000532877 AGAP3Q96P47 875 aa14.54□□□□□ -0.08
COL16A1-217ENST00000532877 TRIM51Q9BSJ1 452 aa14.54□□□□□ -0.08
COL16A1-217ENST00000532877 CINPQ9BW66 212 aaPredicted RBP14.54□□□□□ -0.08
COL16A1-217ENST00000532877 NT5MQ9NPB1 228 aa14.54□□□□□ -0.08
COL16A1-217ENST00000532877 RBM22Q9NW64 420 aaKnown RBP eCLIP14.54□□□□□ -0.08
COL16A1-217ENST00000532877 KLHL8Q9P2G9 620 aaPredicted RBP14.54□□□□□ -0.08
COL16A1-217ENST00000532877 SEPT3Q9UH03 358 aa14.54□□□□□ -0.08
COL16A1-217ENST00000532877 CA14Q9ULX7 337 aa14.54□□□□□ -0.08
COL16A1-217ENST00000532877 FCF1Q9Y324 198 aaKnown RBP14.54□□□□□ -0.08
COL16A1-217ENST00000532877 CEP250Q9BV73 2442 aa14.54□□□□□ -0.08
COL16A1-217ENST00000532877 NCOR2Q9Y618 2525 aa14.53□□□□□ -0.08
COL16A1-217ENST00000532877 K7EQS6 105 aa14.53□□□□□ -0.08
COL16A1-217ENST00000532877 MUSKO15146 869 aa14.53□□□□□ -0.08
COL16A1-217ENST00000532877 SMAD6O43541 496 aaKnown RBP14.53□□□□□ -0.08
COL16A1-217ENST00000532877 NEBLO76041 1014 aa14.53□□□□□ -0.08
COL16A1-217ENST00000532877 EGFP01133 1207 aa14.53□□□□□ -0.08
COL16A1-217ENST00000532877 KRT14P02533 472 aa14.53□□□□□ -0.08
COL16A1-217ENST00000532877 DRD1P21728 446 aa14.53□□□□□ -0.08
COL16A1-217ENST00000532877 TNFRSF4P43489 277 aa14.53□□□□□ -0.08
COL16A1-217ENST00000532877 VASPP50552 380 aaPredicted RBP14.53□□□□□ -0.08
COL16A1-217ENST00000532877 GRSF1Q12849 480 aaKnown RBP eCLIP14.53□□□□□ -0.08
COL16A1-217ENST00000532877 PTK6Q13882 451 aa14.53□□□□□ -0.08
COL16A1-217ENST00000532877 CYTH1Q15438 398 aa14.53□□□□□ -0.08
COL16A1-217ENST00000532877 ANKRD20A2Q5SQ80 823 aa14.53□□□□□ -0.08
COL16A1-217ENST00000532877 ANKRD20A1Q5TYW2 823 aa14.53□□□□□ -0.08
COL16A1-217ENST00000532877 ANKRD20A3Q5VUR7 823 aa14.53□□□□□ -0.08
COL16A1-217ENST00000532877 C22orf39Q6P5X5 142 aa14.53□□□□□ -0.08
COL16A1-217ENST00000532877 ARHGEF18Q6ZSZ5 1173 aa14.53□□□□□ -0.08
COL16A1-217ENST00000532877 SYDE1Q6ZW31 735 aaPredicted RBP14.53□□□□□ -0.08
COL16A1-217ENST00000532877 MAATS1Q7Z4T9 603 aa14.53□□□□□ -0.08
COL16A1-217ENST00000532877 METTL3Q86U44 580 aaKnown RBP14.53□□□□□ -0.08
COL16A1-217ENST00000532877 UBALD2Q8IYN6 164 aa14.53□□□□□ -0.08
COL16A1-217ENST00000532877 BBS5Q8N3I7 341 aa14.53□□□□□ -0.08
COL16A1-217ENST00000532877 PGBD5Q8N414 524 aa14.53□□□□□ -0.08
COL16A1-217ENST00000532877 TMEM105Q8N8V8 129 aa14.53□□□□□ -0.08
COL16A1-217ENST00000532877 TSEN2Q8NCE0 465 aaKnown RBP14.53□□□□□ -0.08
COL16A1-217ENST00000532877 UCMAQ8WVF2 138 aa14.53□□□□□ -0.08
COL16A1-217ENST00000532877 FAM3CQ92520 227 aa14.53□□□□□ -0.08
COL16A1-217ENST00000532877 MYO19Q96H55 970 aa14.53□□□□□ -0.08
COL16A1-217ENST00000532877 TEKT5Q96M29 485 aa14.53□□□□□ -0.08
COL16A1-217ENST00000532877 PSKH2Q96QS6 385 aa14.53□□□□□ -0.08
COL16A1-217ENST00000532877 MGME1Q9BQP7 344 aa14.53□□□□□ -0.08
COL16A1-217ENST00000532877 LRRC1Q9BTT6 524 aa14.53□□□□□ -0.08
COL16A1-217ENST00000532877 LHX3Q9UBR4 397 aa14.53□□□□□ -0.08
COL16A1-217ENST00000532877 WNT16Q9UBV4 365 aa14.53□□□□□ -0.08
COL16A1-217ENST00000532877 SLCO3A1Q9UIG8 710 aa14.53□□□□□ -0.08
COL16A1-217ENST00000532877 FBXL21Q9UKT6 434 aa14.53□□□□□ -0.08
COL16A1-217ENST00000532877 TRHDEQ9UKU6 1024 aa14.53□□□□□ -0.08
COL16A1-217ENST00000532877 HCN2Q9UL51 889 aa14.53□□□□□ -0.08
COL16A1-217ENST00000532877 ATP8A1Q9Y2Q0 1164 aa14.53□□□□□ -0.08
COL16A1-217ENST00000532877 TTLL3Q9Y4R7 772 aa14.53□□□□□ -0.08
COL16A1-217ENST00000532877 OTOGLQ3ZCN5 2332 aa14.53□□□□□ -0.08
COL16A1-217ENST00000532877 ANTXRLA6NF34 631 aa14.52□□□□□ -0.09
COL16A1-217ENST00000532877 FAM187AA6NFU0 413 aa14.52□□□□□ -0.09
COL16A1-217ENST00000532877 MAN2B1O00754 1011 aa14.52□□□□□ -0.09
COL16A1-217ENST00000532877 ZBTB24O43167 697 aaPredicted RBP14.52□□□□□ -0.09
COL16A1-217ENST00000532877 ATP9BO43861 1147 aa14.52□□□□□ -0.09
COL16A1-217ENST00000532877 ZNF821O75541 412 aaPredicted RBP14.52□□□□□ -0.09
COL16A1-217ENST00000532877 CHRM1P11229 460 aaPredicted RBP14.52□□□□□ -0.09
COL16A1-217ENST00000532877 CD72P21854 359 aa14.52□□□□□ -0.09
COL16A1-217ENST00000532877 CD68P34810 354 aaPredicted RBP14.52□□□□□ -0.09
COL16A1-217ENST00000532877 RPL22P35268 128 aaKnown RBP14.52□□□□□ -0.09
COL16A1-217ENST00000532877 ACTN2P35609 894 aa14.52□□□□□ -0.09
COL16A1-217ENST00000532877 VPS41P49754 854 aa14.52□□□□□ -0.09
COL16A1-217ENST00000532877 MAXP61244 160 aa14.52□□□□□ -0.09
COL16A1-217ENST00000532877 RHOAP61586 193 aa14.52□□□□□ -0.09
COL16A1-217ENST00000532877 PRKCQQ04759 706 aa14.52□□□□□ -0.09
COL16A1-217ENST00000532877 FNDC3BQ53EP0 1204 aaKnown RBP14.52□□□□□ -0.09
COL16A1-217ENST00000532877 TEX35Q5T0J7 233 aa14.52□□□□□ -0.09
COL16A1-217ENST00000532877 EGFLAMQ63HQ2 1017 aa14.52□□□□□ -0.09
COL16A1-217ENST00000532877 ALG1LQ6GMV1 187 aa14.52□□□□□ -0.09
COL16A1-217ENST00000532877 ITPRIPL1Q6GPH6 555 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms