RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 ANKRD20A8PQ5CZ79 823 aa14.18□□□□□ -0.14
TSPAN4-220ENST00000532375 ARSIQ5FYB1 569 aa14.18□□□□□ -0.14
TSPAN4-220ENST00000532375 AGBL4Q5VU57 503 aa14.18□□□□□ -0.14
TSPAN4-220ENST00000532375 LYSMD4Q5XG99 296 aa14.18□□□□□ -0.14
TSPAN4-220ENST00000532375 NCBP2-AS2Q69YL0 99 aa14.18□□□□□ -0.14
TSPAN4-220ENST00000532375 SYT12Q8IV01 421 aa14.18□□□□□ -0.14
TSPAN4-220ENST00000532375 TPCN2Q8NHX9 752 aa14.18□□□□□ -0.14
TSPAN4-220ENST00000532375 CASKIN2Q8WXE0 1202 aa14.18□□□□□ -0.14
TSPAN4-220ENST00000532375 NSMCE3Q96MG7 304 aa14.18□□□□□ -0.14
TSPAN4-220ENST00000532375 HEPHQ9BQS7 1158 aa14.18□□□□□ -0.14
TSPAN4-220ENST00000532375 ZNF670Q9BS34 389 aa14.18□□□□□ -0.14
TSPAN4-220ENST00000532375 TM6SF2Q9BZW4 377 aa14.18□□□□□ -0.14
TSPAN4-220ENST00000532375 BTBD1Q9H0C5 482 aa14.18□□□□□ -0.14
TSPAN4-220ENST00000532375 PCED1AQ9H1Q7 454 aa14.18□□□□□ -0.14
TSPAN4-220ENST00000532375 RXFP3Q9NSD7 469 aa14.18□□□□□ -0.14
TSPAN4-220ENST00000532375 HECAQ9UBI9 543 aaPredicted RBP14.18□□□□□ -0.14
TSPAN4-220ENST00000532375 SLCO1B1Q9Y6L6 691 aa14.18□□□□□ -0.14
TSPAN4-220ENST00000532375 ADAMTS9Q9P2N4 1935 aa14.17□□□□□ -0.14
TSPAN4-220ENST00000532375 PCDH15Q96QU1 1955 aa14.17□□□□□ -0.14
TSPAN4-220ENST00000532375 MAFKO60675 156 aa14.17□□□□□ -0.14
TSPAN4-220ENST00000532375 NDUFS2O75306 463 aa14.17□□□□□ -0.14
TSPAN4-220ENST00000532375 LEFTY1O75610 366 aa14.17□□□□□ -0.14
TSPAN4-220ENST00000532375 RNASEH2AO75792 299 aaKnown RBP14.17□□□□□ -0.14
TSPAN4-220ENST00000532375 SEMA4FO95754 770 aa14.17□□□□□ -0.14
TSPAN4-220ENST00000532375 IGHV4-34P06331 123 aa14.17□□□□□ -0.14
TSPAN4-220ENST00000532375 MAOBP27338 520 aa14.17□□□□□ -0.14
TSPAN4-220ENST00000532375 GKP32189 559 aa14.17□□□□□ -0.14
TSPAN4-220ENST00000532375 GJC1P36383 396 aa14.17□□□□□ -0.14
TSPAN4-220ENST00000532375 RGRP47804 291 aa14.17□□□□□ -0.14
TSPAN4-220ENST00000532375 VAV2P52735 878 aa14.17□□□□□ -0.14
TSPAN4-220ENST00000532375 IL10RBQ08334 325 aa14.17□□□□□ -0.14
TSPAN4-220ENST00000532375 SLC10A2Q12908 348 aaPredicted RBP14.17□□□□□ -0.14
TSPAN4-220ENST00000532375 KRT81Q14533 505 aa14.17□□□□□ -0.14
TSPAN4-220ENST00000532375 SF3A2Q15428 464 aaKnown RBP14.17□□□□□ -0.14
TSPAN4-220ENST00000532375 TAZQ16635 292 aa14.17□□□□□ -0.14
TSPAN4-220ENST00000532375 MYLK3Q32MK0 819 aa14.17□□□□□ -0.14
TSPAN4-220ENST00000532375 ATXN7L2Q5T6C5 722 aaPredicted RBP14.17□□□□□ -0.14
TSPAN4-220ENST00000532375 PIP5KL1Q5T9C9 394 aa14.17□□□□□ -0.14
TSPAN4-220ENST00000532375 FAM46CQ5VWP2 391 aa14.17□□□□□ -0.14
TSPAN4-220ENST00000532375 TCEAL6Q6IPX3 200 aa14.17□□□□□ -0.14
TSPAN4-220ENST00000532375 TMCO3Q6UWJ1 677 aa14.17□□□□□ -0.14
TSPAN4-220ENST00000532375 DSG4Q86SJ6 1040 aa14.17□□□□□ -0.14
TSPAN4-220ENST00000532375 KIAA2013Q8IYS2 634 aa14.17□□□□□ -0.14
TSPAN4-220ENST00000532375 GPR161Q8N6U8 529 aaKnown RBP14.17□□□□□ -0.14
TSPAN4-220ENST00000532375 KCTD6Q8NC69 237 aa14.17□□□□□ -0.14
TSPAN4-220ENST00000532375 OR2AP1Q8NGE2 309 aa14.17□□□□□ -0.14
TSPAN4-220ENST00000532375 PIGKQ92643 395 aa14.17□□□□□ -0.14
TSPAN4-220ENST00000532375 FOXJ1Q92949 421 aa14.17□□□□□ -0.14
TSPAN4-220ENST00000532375 TCEAL3Q969E4 200 aa14.17□□□□□ -0.14
TSPAN4-220ENST00000532375 BIRC7Q96CA5 298 aa14.17□□□□□ -0.14
TSPAN4-220ENST00000532375 RNF157Q96PX1 679 aa14.17□□□□□ -0.14
TSPAN4-220ENST00000532375 EBF2Q9HAK2 575 aa14.17□□□□□ -0.14
TSPAN4-220ENST00000532375 VPS45Q9NRW7 570 aa14.17□□□□□ -0.14
TSPAN4-220ENST00000532375 IL36AQ9UHA7 158 aa14.17□□□□□ -0.14
TSPAN4-220ENST00000532375 IPO11Q9UI26 975 aaKnown RBP14.17□□□□□ -0.14
TSPAN4-220ENST00000532375 NCKAP1Q9Y2A7 1128 aa14.17□□□□□ -0.14
TSPAN4-220ENST00000532375 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.17□□□□□ -0.14
TSPAN4-220ENST00000532375 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.17□□□□□ -0.14
TSPAN4-220ENST00000532375 ZNF487B1APH4 448 aa14.16□□□□□ -0.14
TSPAN4-220ENST00000532375 DFFAO00273 331 aa14.16□□□□□ -0.14
TSPAN4-220ENST00000532375 MUSKO15146 869 aa14.16□□□□□ -0.14
TSPAN4-220ENST00000532375 INSIG1O15503 277 aa14.16□□□□□ -0.14
TSPAN4-220ENST00000532375 POP4O95707 220 aaKnown RBP14.16□□□□□ -0.14
TSPAN4-220ENST00000532375 PRNPP04156 253 aa14.16□□□□□ -0.14
TSPAN4-220ENST00000532375 NOP2P46087 812 aaKnown RBP14.16□□□□□ -0.14
TSPAN4-220ENST00000532375 DNA2P51530 1060 aa14.16□□□□□ -0.14
TSPAN4-220ENST00000532375 ADPRHP54922 357 aa14.16□□□□□ -0.14
TSPAN4-220ENST00000532375 POM121L1PQ3SYA9 428 aa14.16□□□□□ -0.14
TSPAN4-220ENST00000532375 DCAF12L1Q5VU92 463 aa14.16□□□□□ -0.14
TSPAN4-220ENST00000532375 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.16□□□□□ -0.14
TSPAN4-220ENST00000532375 PRR23CQ6ZRP0 262 aa14.16□□□□□ -0.14
TSPAN4-220ENST00000532375 CYP2U1Q7Z449 544 aa14.16□□□□□ -0.14
TSPAN4-220ENST00000532375 VSIG1Q86XK7 387 aa14.16□□□□□ -0.14
TSPAN4-220ENST00000532375 OR6K2Q8NGY2 324 aa14.16□□□□□ -0.14
TSPAN4-220ENST00000532375 CCDC114Q96M63 670 aa14.16□□□□□ -0.14
TSPAN4-220ENST00000532375 OMDQ99983 421 aa14.16□□□□□ -0.14
TSPAN4-220ENST00000532375 HINFPQ9BQA5 517 aa14.16□□□□□ -0.14
TSPAN4-220ENST00000532375 DESI2Q9BSY9 194 aa14.16□□□□□ -0.14
TSPAN4-220ENST00000532375 CALN1Q9BXU9 219 aa14.16□□□□□ -0.14
TSPAN4-220ENST00000532375 GRPEL1Q9HAV7 217 aa14.16□□□□□ -0.14
TSPAN4-220ENST00000532375 UBA2Q9UBT2 640 aaPredicted RBP14.16□□□□□ -0.14
TSPAN4-220ENST00000532375 PLXNA2O75051 1894 aa14.16□□□□□ -0.14
TSPAN4-220ENST00000532375 ATXN2Q99700 1313 aaKnown RBP14.15□□□□□ -0.14
TSPAN4-220ENST00000532375 ANKRD36A6QL64 1941 aa14.15□□□□□ -0.14
TSPAN4-220ENST00000532375 TRPM6Q9BX84 2022 aa14.15□□□□□ -0.14
TSPAN4-220ENST00000532375 C1QTNF3-AMACRE9PGA6 284 aa14.15□□□□□ -0.14
TSPAN4-220ENST00000532375 KPNA3O00505 521 aaPredicted RBP14.15□□□□□ -0.14
TSPAN4-220ENST00000532375 SLC7A4O43246 635 aa14.15□□□□□ -0.14
TSPAN4-220ENST00000532375 PLRG1O43660 514 aaKnown RBP14.15□□□□□ -0.14
TSPAN4-220ENST00000532375 MFSD11O43934 449 aa14.15□□□□□ -0.14
TSPAN4-220ENST00000532375 GDF9O60383 454 aa14.15□□□□□ -0.14
TSPAN4-220ENST00000532375 HOXD12P35452 270 aa14.15□□□□□ -0.14
TSPAN4-220ENST00000532375 MARCKSL1P49006 195 aa14.15□□□□□ -0.14
TSPAN4-220ENST00000532375 GSDMDP57764 484 aa14.15□□□□□ -0.14
TSPAN4-220ENST00000532375 SNRPD1P62314 119 aaKnown RBP14.15□□□□□ -0.14
TSPAN4-220ENST00000532375 IRX4P78413 519 aa14.15□□□□□ -0.14
TSPAN4-220ENST00000532375 SLC10A7Q0GE19 358 aa14.15□□□□□ -0.14
TSPAN4-220ENST00000532375 GALNT2Q10471 571 aa14.15□□□□□ -0.14
TSPAN4-220ENST00000532375 SFSWAPQ12872 951 aaKnown RBP14.15□□□□□ -0.14
TSPAN4-220ENST00000532375 KIAA0895LQ68EN5 471 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms