RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 ATP9BO43861 1147 aa12.74□□□□□ -0.37
COPB1-208ENST00000532088 URI1O94763 535 aaPredicted RBP12.74□□□□□ -0.37
COPB1-208ENST00000532088 PEX11BO96011 259 aa12.74□□□□□ -0.37
COPB1-208ENST00000532088 ITGAVP06756 1048 aa12.74□□□□□ -0.37
COPB1-208ENST00000532088 RBP3P10745 1247 aa12.74□□□□□ -0.37
COPB1-208ENST00000532088 ALADP13716 330 aa12.74□□□□□ -0.37
COPB1-208ENST00000532088 STIP1P31948 543 aaKnown RBP12.74□□□□□ -0.37
COPB1-208ENST00000532088 HSPA9P38646 679 aaKnown RBP12.74□□□□□ -0.37
COPB1-208ENST00000532088 KIR2DL1P43626 348 aaPredicted RBP12.74□□□□□ -0.37
COPB1-208ENST00000532088 FNTAP49354 379 aa12.74□□□□□ -0.37
COPB1-208ENST00000532088 RENBPP51606 427 aa12.74□□□□□ -0.37
COPB1-208ENST00000532088 EIF3EP60228 445 aaKnown RBP12.74□□□□□ -0.37
COPB1-208ENST00000532088 IFI35P80217 286 aaPredicted RBP12.74□□□□□ -0.37
COPB1-208ENST00000532088 LMNB2Q03252 620 aa12.74□□□□□ -0.37
COPB1-208ENST00000532088 MESP2Q0VG99 397 aa12.74□□□□□ -0.37
COPB1-208ENST00000532088 BYSLQ13895 437 aaKnown RBP12.74□□□□□ -0.37
COPB1-208ENST00000532088 LRRC32Q14392 662 aa12.74□□□□□ -0.37
COPB1-208ENST00000532088 OASLQ15646 514 aaKnown RBP12.74□□□□□ -0.37
COPB1-208ENST00000532088 NAIF1Q69YI7 327 aaPredicted RBP12.74□□□□□ -0.37
COPB1-208ENST00000532088 ZNF354CQ86Y25 554 aa12.74□□□□□ -0.37
COPB1-208ENST00000532088 TP53INP2Q8IXH6 220 aa12.74□□□□□ -0.37
COPB1-208ENST00000532088 BBS5Q8N3I7 341 aa12.74□□□□□ -0.37
COPB1-208ENST00000532088 TEX26Q8N6G2 289 aa12.74□□□□□ -0.37
COPB1-208ENST00000532088 PRELID2Q8N945 189 aa12.74□□□□□ -0.37
COPB1-208ENST00000532088 HPS1Q92902 700 aa12.74□□□□□ -0.37
COPB1-208ENST00000532088 NECAB3Q96P71 396 aaPredicted RBP12.74□□□□□ -0.37
COPB1-208ENST00000532088 IER2Q9BTL4 223 aa12.74□□□□□ -0.37
COPB1-208ENST00000532088 FBRSL1Q9HCM7 1045 aaKnown RBP12.74□□□□□ -0.37
COPB1-208ENST00000532088 LTB4R2Q9NPC1 389 aa12.74□□□□□ -0.37
COPB1-208ENST00000532088 SAE1Q9UBE0 346 aaPredicted RBP12.74□□□□□ -0.37
COPB1-208ENST00000532088 UBA2Q9UBT2 640 aaPredicted RBP12.74□□□□□ -0.37
COPB1-208ENST00000532088 CA14Q9ULX7 337 aa12.74□□□□□ -0.37
COPB1-208ENST00000532088 PLA2G4CQ9UP65 541 aa12.74□□□□□ -0.37
COPB1-208ENST00000532088 SLC8A2Q9UPR5 921 aa12.74□□□□□ -0.37
COPB1-208ENST00000532088 ERVW-1Q9UQF0 538 aa12.74□□□□□ -0.37
COPB1-208ENST00000532088 R3HDM2Q9Y2K5 976 aaKnown RBP12.74□□□□□ -0.37
COPB1-208ENST00000532088 MIA3Q5JRA6 1907 aa12.74□□□□□ -0.37
COPB1-208ENST00000532088 NYNRINQ9P2P1 1898 aaKnown RBP12.74□□□□□ -0.37
COPB1-208ENST00000532088 ERVH48-1M5A8F1 160 aa12.73□□□□□ -0.37
COPB1-208ENST00000532088 KRIT1O00522 736 aa12.73□□□□□ -0.37
COPB1-208ENST00000532088 SNAP91O60641 907 aa12.73□□□□□ -0.37
COPB1-208ENST00000532088 CD160O95971 181 aa12.73□□□□□ -0.37
COPB1-208ENST00000532088 EGFP01133 1207 aa12.73□□□□□ -0.37
COPB1-208ENST00000532088 AVPP01185 164 aa12.73□□□□□ -0.37
COPB1-208ENST00000532088 CHRNB1P11230 501 aa12.73□□□□□ -0.37
COPB1-208ENST00000532088 CHRNA3P32297 505 aa12.73□□□□□ -0.37
COPB1-208ENST00000532088 MAGEA9P43362 315 aa12.73□□□□□ -0.37
COPB1-208ENST00000532088 ST8SIA6P61647 398 aa12.73□□□□□ -0.37
COPB1-208ENST00000532088 RALGPS1Q5JS13 557 aa12.73□□□□□ -0.37
COPB1-208ENST00000532088 HEATR6Q6AI08 1181 aaKnown RBP12.73□□□□□ -0.37
COPB1-208ENST00000532088 ARHGAP36Q6ZRI8 547 aa12.73□□□□□ -0.37
COPB1-208ENST00000532088 SIX5Q8N196 739 aa12.73□□□□□ -0.37
COPB1-208ENST00000532088 SH2D3CQ8N5H7 860 aa12.73□□□□□ -0.37
COPB1-208ENST00000532088 CCNYQ8ND76 341 aa12.73□□□□□ -0.37
COPB1-208ENST00000532088 EZH1Q92800 747 aaPredicted RBP12.73□□□□□ -0.37
COPB1-208ENST00000532088 RTP4Q96DX8 246 aa12.73□□□□□ -0.37
COPB1-208ENST00000532088 MYO19Q96H55 970 aa12.73□□□□□ -0.37
COPB1-208ENST00000532088 MRGPRX3Q96LB0 322 aa12.73□□□□□ -0.37
COPB1-208ENST00000532088 LGMNQ99538 433 aa12.73□□□□□ -0.37
COPB1-208ENST00000532088 IL12RB2Q99665 862 aa12.73□□□□□ -0.37
COPB1-208ENST00000532088 CIPCQ9C0C6 399 aa12.73□□□□□ -0.37
COPB1-208ENST00000532088 SEPT3Q9UH03 358 aa12.73□□□□□ -0.37
COPB1-208ENST00000532088 FEZ2Q9UHY8 353 aaPredicted RBP12.73□□□□□ -0.37
COPB1-208ENST00000532088 MUC22E2RYF6 1773 aaPredicted RBP12.73□□□□□ -0.37
COPB1-208ENST00000532088 NUP205Q92621 2012 aa12.72□□□□□ -0.37
COPB1-208ENST00000532088 CHURC1-FNTBB4DL54 471 aa12.72□□□□□ -0.37
COPB1-208ENST00000532088 H7C0C1 242 aa12.72□□□□□ -0.37
COPB1-208ENST00000532088 J3KR12 359 aa12.72□□□□□ -0.37
COPB1-208ENST00000532088 PHF2O75151 1096 aa12.72□□□□□ -0.37
COPB1-208ENST00000532088 SRCP12931 536 aa12.72□□□□□ -0.37
COPB1-208ENST00000532088 CCNB1P14635 433 aa12.72□□□□□ -0.37
COPB1-208ENST00000532088 GLDCP23378 1020 aa12.72□□□□□ -0.37
COPB1-208ENST00000532088 ATP5OP48047 213 aa12.72□□□□□ -0.37
COPB1-208ENST00000532088 CSNK1DP48730 415 aa12.72□□□□□ -0.37
COPB1-208ENST00000532088 RAB15P59190 212 aa12.72□□□□□ -0.37
COPB1-208ENST00000532088 NSUN2Q08J23 767 aaKnown RBP eCLIP12.72□□□□□ -0.37
COPB1-208ENST00000532088 AP1B1Q10567 949 aa12.72□□□□□ -0.37
COPB1-208ENST00000532088 LBRQ14739 615 aaKnown RBP12.72□□□□□ -0.37
COPB1-208ENST00000532088 MARC1Q5VT66 337 aa12.72□□□□□ -0.37
COPB1-208ENST00000532088 ALG1LQ6GMV1 187 aa12.72□□□□□ -0.37
COPB1-208ENST00000532088 DARS2Q6PI48 645 aaKnown RBP12.72□□□□□ -0.37
COPB1-208ENST00000532088 ZC3H18Q86VM9 953 aaKnown RBP12.72□□□□□ -0.37
COPB1-208ENST00000532088 PCDH20Q8N6Y1 951 aaKnown RBP12.72□□□□□ -0.37
COPB1-208ENST00000532088 MNS1Q8NEH6 495 aa12.72□□□□□ -0.37
COPB1-208ENST00000532088 ATL2Q8NHH9 583 aa12.72□□□□□ -0.37
COPB1-208ENST00000532088 GRK7Q8WTQ7 553 aa12.72□□□□□ -0.37
COPB1-208ENST00000532088 C1orf54Q8WWF1 131 aa12.72□□□□□ -0.37
COPB1-208ENST00000532088 HTR3CQ8WXA8 447 aa12.72□□□□□ -0.37
COPB1-208ENST00000532088 SLCO2A1Q92959 643 aa12.72□□□□□ -0.37
COPB1-208ENST00000532088 CLDN23Q96B33 292 aa12.72□□□□□ -0.37
COPB1-208ENST00000532088 CAPZA3Q96KX2 299 aa12.72□□□□□ -0.37
COPB1-208ENST00000532088 PSKH2Q96QS6 385 aa12.72□□□□□ -0.37
COPB1-208ENST00000532088 TMEM245Q9H330 911 aa12.72□□□□□ -0.37
COPB1-208ENST00000532088 TBC1D17Q9HA65 648 aa12.72□□□□□ -0.37
COPB1-208ENST00000532088 SUN2Q9UH99 717 aa12.72□□□□□ -0.37
COPB1-208ENST00000532088 TRHDEQ9UKU6 1024 aa12.72□□□□□ -0.37
COPB1-208ENST00000532088 DNPEPQ9ULA0 475 aa12.72□□□□□ -0.37
COPB1-208ENST00000532088 UNC80Q8N2C7 3258 aa12.72□□□□□ -0.37
COPB1-208ENST00000532088 TARSL2A2RTX5 802 aaKnown RBP12.71□□□□□ -0.37
COPB1-208ENST00000532088 C5orf60A6NFR6 353 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms