RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 TKTL2Q9H0I9 626 aa17.69■□□□□ 0.42
PKP3-208ENST00000531857 ARHGEF38Q9NXL2 777 aa17.69■□□□□ 0.42
PKP3-208ENST00000531857 MPP6Q9NZW5 540 aa17.69■□□□□ 0.42
PKP3-208ENST00000531857 KLF15Q9UIH9 416 aa17.69■□□□□ 0.42
PKP3-208ENST00000531857 PCDHGC3Q9UN70 934 aa17.69■□□□□ 0.42
PKP3-208ENST00000531857 WASF2Q9Y6W5 498 aa17.69■□□□□ 0.42
PKP3-208ENST00000531857 CHD5Q8TDI0 1954 aa17.69■□□□□ 0.42
PKP3-208ENST00000531857 NEMP2A6NFY4 417 aa17.68■□□□□ 0.42
PKP3-208ENST00000531857 KLK10O43240 276 aa17.68■□□□□ 0.42
PKP3-208ENST00000531857 PAK4O96013 591 aaPredicted RBP17.68■□□□□ 0.42
PKP3-208ENST00000531857 TGM2P21980 687 aa17.68■□□□□ 0.42
PKP3-208ENST00000531857 CXCR3P49682 368 aa17.68■□□□□ 0.42
PKP3-208ENST00000531857 ERVPABLB-1P60509 514 aa17.68■□□□□ 0.42
PKP3-208ENST00000531857 CDKN3Q16667 212 aa17.68■□□□□ 0.42
PKP3-208ENST00000531857 ISXQ2M1V0 245 aa17.68■□□□□ 0.42
PKP3-208ENST00000531857 TFAP2DQ7Z6R9 452 aa17.68■□□□□ 0.42
PKP3-208ENST00000531857 DCAF4L2Q8NA75 395 aa17.68■□□□□ 0.42
PKP3-208ENST00000531857 ZNF548Q8NEK5 533 aaPredicted RBP17.68■□□□□ 0.42
PKP3-208ENST00000531857 OR7D4Q8NG98 312 aa17.68■□□□□ 0.42
PKP3-208ENST00000531857 MAPK15Q8TD08 544 aa17.68■□□□□ 0.42
PKP3-208ENST00000531857 SHC3Q92529 594 aa17.68■□□□□ 0.42
PKP3-208ENST00000531857 SLC17A9Q9BYT1 436 aa17.68■□□□□ 0.42
PKP3-208ENST00000531857 RBSNQ9H1K0 784 aa17.68■□□□□ 0.42
PKP3-208ENST00000531857 WDCPQ9H6R7 721 aa17.68■□□□□ 0.42
PKP3-208ENST00000531857 PLCB1Q9NQ66 1216 aa17.68■□□□□ 0.42
PKP3-208ENST00000531857 AJAP1Q9UKB5 411 aaPredicted RBP17.68■□□□□ 0.42
PKP3-208ENST00000531857 SATB2Q9UPW6 733 aa17.68■□□□□ 0.42
PKP3-208ENST00000531857 HS3ST3A1Q9Y663 406 aa17.68■□□□□ 0.42
PKP3-208ENST00000531857 SPTY2D1-AS1A0A0U1RR47 76 aa17.67■□□□□ 0.42
PKP3-208ENST00000531857 DRGXA6NNA5 263 aa17.67■□□□□ 0.42
PKP3-208ENST00000531857 J3QKU1 62 aa17.67■□□□□ 0.42
PKP3-208ENST00000531857 CSF2P04141 144 aa17.67■□□□□ 0.42
PKP3-208ENST00000531857 DUSP3P51452 185 aaPredicted RBP17.67■□□□□ 0.42
PKP3-208ENST00000531857 CLCN6P51797 869 aa17.67■□□□□ 0.42
PKP3-208ENST00000531857 UCNP55089 124 aa17.67■□□□□ 0.42
PKP3-208ENST00000531857 RNASE9P60153 205 aaKnown RBP17.67■□□□□ 0.42
PKP3-208ENST00000531857 HNRNPKP61978 463 aaKnown RBP eCLIP17.67■□□□□ 0.421e-8■■■■□ 22.4
PKP3-208ENST00000531857 RHDQ02161 417 aa17.67■□□□□ 0.42
PKP3-208ENST00000531857 PAK1Q13153 545 aa17.67■□□□□ 0.42
PKP3-208ENST00000531857 LY6DQ14210 128 aa17.67■□□□□ 0.42
PKP3-208ENST00000531857 C3orf38Q5JPI3 329 aa17.67■□□□□ 0.42
PKP3-208ENST00000531857 TPRG1LQ5T0D9 272 aa17.67■□□□□ 0.42
PKP3-208ENST00000531857 SETD3Q86TU7 594 aaPredicted RBP17.67■□□□□ 0.42
PKP3-208ENST00000531857 DCP2Q8IU60 420 aaKnown RBP17.67■□□□□ 0.42
PKP3-208ENST00000531857 ZNF397Q8NF99 534 aaPredicted RBP17.67■□□□□ 0.42
PKP3-208ENST00000531857 VCPIP1Q96JH7 1222 aa17.67■□□□□ 0.42
PKP3-208ENST00000531857 FUCA2Q9BTY2 467 aa17.67■□□□□ 0.42
PKP3-208ENST00000531857 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.67■□□□□ 0.42
PKP3-208ENST00000531857 DUSP23Q9BVJ7 150 aa17.67■□□□□ 0.42
PKP3-208ENST00000531857 USP29Q9HBJ7 922 aa17.67■□□□□ 0.42
PKP3-208ENST00000531857 APEX2Q9UBZ4 518 aa17.67■□□□□ 0.42
PKP3-208ENST00000531857 MYO18BQ8IUG5 2567 aa17.66■□□□□ 0.42
PKP3-208ENST00000531857 LRRK1Q38SD2 2015 aa17.66■□□□□ 0.42
PKP3-208ENST00000531857 CPED1A4D0V7 1026 aa17.66■□□□□ 0.42
PKP3-208ENST00000531857 PMS2P1A4D2B8 440 aa17.66■□□□□ 0.42
PKP3-208ENST00000531857 CASC3O15234 703 aaKnown RBP17.66■□□□□ 0.42
PKP3-208ENST00000531857 SPINT1O43278 529 aa17.66■□□□□ 0.42
PKP3-208ENST00000531857 LZTS3O60299 673 aaPredicted RBP17.66■□□□□ 0.42
PKP3-208ENST00000531857 ZMPSTE24O75844 475 aa17.66■□□□□ 0.42
PKP3-208ENST00000531857 ADRB3P13945 408 aa17.66■□□□□ 0.42
PKP3-208ENST00000531857 NME1P15531 152 aaKnown RBP17.66■□□□□ 0.42
PKP3-208ENST00000531857 OR1E1P30953 314 aa17.66■□□□□ 0.42
PKP3-208ENST00000531857 RECQLP46063 649 aaPredicted RBP17.66■□□□□ 0.42
PKP3-208ENST00000531857 SULT1E1P49888 294 aa17.66■□□□□ 0.42
PKP3-208ENST00000531857 NEK3P51956 506 aa17.66■□□□□ 0.42
PKP3-208ENST00000531857 RPS21P63220 83 aaKnown RBP17.66■□□□□ 0.42
PKP3-208ENST00000531857 BRMS1LQ5PSV4 323 aa17.66■□□□□ 0.42
PKP3-208ENST00000531857 ZCCHC8Q6NZY4 707 aaKnown RBP17.66■□□□□ 0.42
PKP3-208ENST00000531857 GUSBP11Q6P575 273 aa17.66■□□□□ 0.42
PKP3-208ENST00000531857 CRTC1Q6UUV9 634 aa17.66■□□□□ 0.42
PKP3-208ENST00000531857 KYAT3Q6YP21 454 aaKnown RBP17.66■□□□□ 0.42
PKP3-208ENST00000531857 FAM174AQ8TBP5 190 aa17.66■□□□□ 0.42
PKP3-208ENST00000531857 NT5C3BQ969T7 300 aa17.66■□□□□ 0.42
PKP3-208ENST00000531857 WBP1Q96G27 269 aa17.66■□□□□ 0.42
PKP3-208ENST00000531857 ATXN7L3BQ96GX2 97 aa17.66■□□□□ 0.42
PKP3-208ENST00000531857 PPP1R16AQ96I34 528 aa17.66■□□□□ 0.42
PKP3-208ENST00000531857 KLF6Q99612 283 aaPredicted RBP17.66■□□□□ 0.42
PKP3-208ENST00000531857 SPON2Q9BUD6 331 aa17.66■□□□□ 0.42
PKP3-208ENST00000531857 SYNCQ9H7C4 482 aa17.66■□□□□ 0.42
PKP3-208ENST00000531857 THSD1Q9NS62 852 aa17.66■□□□□ 0.42
PKP3-208ENST00000531857 FADS3Q9Y5Q0 445 aa17.66■□□□□ 0.42
PKP3-208ENST00000531857 ACTL7AQ9Y615 435 aa17.66■□□□□ 0.42
PKP3-208ENST00000531857 IGLV3-10A0A075B6K4 115 aa17.65■□□□□ 0.42
PKP3-208ENST00000531857 FAM170AA1A519 330 aa17.65■□□□□ 0.42
PKP3-208ENST00000531857 PNMA6AP0CW24 399 aaPredicted RBP17.65■□□□□ 0.42
PKP3-208ENST00000531857 ITGB7P26010 798 aa17.65■□□□□ 0.42
PKP3-208ENST00000531857 L1CAMP32004 1257 aa17.65■□□□□ 0.42
PKP3-208ENST00000531857 CLCN1P35523 988 aa17.65■□□□□ 0.42
PKP3-208ENST00000531857 PTK2Q05397 1052 aa17.65■□□□□ 0.42
PKP3-208ENST00000531857 VAC14Q08AM6 782 aa17.65■□□□□ 0.42
PKP3-208ENST00000531857 DRAP1Q14919 205 aaPredicted RBP17.65■□□□□ 0.42
PKP3-208ENST00000531857 DEFB133Q30KQ1 61 aa17.65■□□□□ 0.42
PKP3-208ENST00000531857 KIAA1161Q6NSJ0 714 aa17.65■□□□□ 0.42
PKP3-208ENST00000531857 PARS2Q7L3T8 475 aaKnown RBP17.65■□□□□ 0.42
PKP3-208ENST00000531857 EFL1Q7Z2Z2 1120 aaKnown RBP17.65■□□□□ 0.42
PKP3-208ENST00000531857 SLC47A2Q86VL8 602 aa17.65■□□□□ 0.42
PKP3-208ENST00000531857 PARGQ86W56 976 aa17.65■□□□□ 0.42
PKP3-208ENST00000531857 CREBRFQ8IUR6 639 aa17.65■□□□□ 0.42
PKP3-208ENST00000531857 TTC9Q92623 222 aa17.65■□□□□ 0.42
PKP3-208ENST00000531857 TRIM44Q96DX7 344 aaPredicted RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms