RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 SPTY2D1-AS1A0A0U1RR47 76 aa9.43□□□□□ -0.9
NEDD8-206ENST00000531430 EME2A4GXA9 379 aaPredicted RBP9.43□□□□□ -0.9
NEDD8-206ENST00000531430 SMC2O95347 1197 aa9.43□□□□□ -0.9
NEDD8-206ENST00000531430 HGFP14210 728 aa9.43□□□□□ -0.9
NEDD8-206ENST00000531430 GNA15P30679 374 aa9.43□□□□□ -0.9
NEDD8-206ENST00000531430 NEK3P51956 506 aa9.43□□□□□ -0.9
NEDD8-206ENST00000531430 CDH4P55283 916 aa9.43□□□□□ -0.9
NEDD8-206ENST00000531430 STIM1Q13586 685 aa9.43□□□□□ -0.9
NEDD8-206ENST00000531430 ARHGAP44Q17R89 818 aa9.43□□□□□ -0.9
NEDD8-206ENST00000531430 ARL13BQ3SXY8 428 aa9.43□□□□□ -0.9
NEDD8-206ENST00000531430 ALFQ53S48 1182 aa9.43□□□□□ -0.9
NEDD8-206ENST00000531430 ESRP1Q6NXG1 681 aaKnown RBP9.43□□□□□ -0.9
NEDD8-206ENST00000531430 LRRC31Q6UY01 552 aa9.43□□□□□ -0.9
NEDD8-206ENST00000531430 DPY19L3Q6ZPD9 716 aa9.43□□□□□ -0.9
NEDD8-206ENST00000531430 BEND5Q7L4P6 421 aa9.43□□□□□ -0.9
NEDD8-206ENST00000531430 RD3Q7Z3Z2 195 aa9.43□□□□□ -0.9
NEDD8-206ENST00000531430 TMEM110Q86TL2 294 aa9.43□□□□□ -0.9
NEDD8-206ENST00000531430 PARGQ86W56 976 aa9.43□□□□□ -0.9
NEDD8-206ENST00000531430 RBFAQ8N0V3 343 aa9.43□□□□□ -0.9
NEDD8-206ENST00000531430 OR7D4Q8NG98 312 aa9.43□□□□□ -0.9
NEDD8-206ENST00000531430 FAM174AQ8TBP5 190 aa9.43□□□□□ -0.9
NEDD8-206ENST00000531430 STK32AQ8WU08 396 aa9.43□□□□□ -0.9
NEDD8-206ENST00000531430 BTN2A2Q8WVV5 523 aa9.43□□□□□ -0.9
NEDD8-206ENST00000531430 SMARCE1Q969G3 411 aa9.43□□□□□ -0.9
NEDD8-206ENST00000531430 GRAMD1AQ96CP6 724 aa9.43□□□□□ -0.9
NEDD8-206ENST00000531430 KREMEN1Q96MU8 473 aa9.43□□□□□ -0.9
NEDD8-206ENST00000531430 CCDC3Q9BQI4 270 aa9.43□□□□□ -0.9
NEDD8-206ENST00000531430 HDAC8Q9BY41 377 aa9.43□□□□□ -0.9
NEDD8-206ENST00000531430 TKTL2Q9H0I9 626 aa9.43□□□□□ -0.9
NEDD8-206ENST00000531430 TCEAL2Q9H3H9 227 aaPredicted RBP9.43□□□□□ -0.9
NEDD8-206ENST00000531430 ZDHHC6Q9H6R6 413 aa9.43□□□□□ -0.9
NEDD8-206ENST00000531430 GDPD2Q9HCC8 539 aa9.43□□□□□ -0.9
NEDD8-206ENST00000531430 MPP6Q9NZW5 540 aa9.43□□□□□ -0.9
NEDD8-206ENST00000531430 SIRPGQ9P1W8 387 aa9.43□□□□□ -0.9
NEDD8-206ENST00000531430 VPS51Q9UID3 782 aa9.43□□□□□ -0.9
NEDD8-206ENST00000531430 PADI4Q9UM07 663 aa9.43□□□□□ -0.9
NEDD8-206ENST00000531430 PCDHGA8Q9Y5G5 932 aa9.43□□□□□ -0.9
NEDD8-206ENST00000531430 OR51B4Q9Y5P0 310 aa9.43□□□□□ -0.9
NEDD8-206ENST00000531430 CSNK1G3Q9Y6M4 447 aa9.43□□□□□ -0.9
NEDD8-206ENST00000531430 RP1P56715 2156 aa9.42□□□□□ -0.9
NEDD8-206ENST00000531430 GOLGA6L4A6NEF3 574 aa9.42□□□□□ -0.9
NEDD8-206ENST00000531430 YY2O15391 372 aa9.42□□□□□ -0.9
NEDD8-206ENST00000531430 SPINT1O43278 529 aa9.42□□□□□ -0.9
NEDD8-206ENST00000531430 EFSO43281 561 aa9.42□□□□□ -0.9
NEDD8-206ENST00000531430 GCATO75600 419 aa9.42□□□□□ -0.9
NEDD8-206ENST00000531430 IGLV3-25P01717 112 aa9.42□□□□□ -0.9
NEDD8-206ENST00000531430 JMJD7P0C870 316 aa9.42□□□□□ -0.9
NEDD8-206ENST00000531430 ADRB3P13945 408 aa9.42□□□□□ -0.9
NEDD8-206ENST00000531430 CTSEP14091 401 aa9.42□□□□□ -0.9
NEDD8-206ENST00000531430 NME1P15531 152 aaKnown RBP9.42□□□□□ -0.9
NEDD8-206ENST00000531430 OR1E1P30953 314 aa9.42□□□□□ -0.9
NEDD8-206ENST00000531430 SLC5A2P31639 672 aa9.42□□□□□ -0.9
NEDD8-206ENST00000531430 L1CAMP32004 1257 aa9.42□□□□□ -0.9
NEDD8-206ENST00000531430 GKP32189 559 aa9.42□□□□□ -0.9
NEDD8-206ENST00000531430 NOS2P35228 1153 aa9.42□□□□□ -0.9
NEDD8-206ENST00000531430 RPL34P49207 117 aaKnown RBP9.42□□□□□ -0.9
NEDD8-206ENST00000531430 VASPP50552 380 aaPredicted RBP9.42□□□□□ -0.9
NEDD8-206ENST00000531430 LRRC63Q05C16 580 aa9.42□□□□□ -0.9
NEDD8-206ENST00000531430 EIF2B5Q13144 721 aaKnown RBP9.42□□□□□ -0.9
NEDD8-206ENST00000531430 SRSF6Q13247 344 aaKnown RBP9.42□□□□□ -0.9
NEDD8-206ENST00000531430 PTK2BQ14289 1009 aa9.42□□□□□ -0.9
NEDD8-206ENST00000531430 FGL2Q14314 439 aa9.42□□□□□ -0.9
NEDD8-206ENST00000531430 LINC00303Q3SY05 128 aa9.42□□□□□ -0.9
NEDD8-206ENST00000531430 CARD16Q5EG05 197 aa9.42□□□□□ -0.9
NEDD8-206ENST00000531430 COLEC12Q5KU26 742 aa9.42□□□□□ -0.9
NEDD8-206ENST00000531430 KIAA1161Q6NSJ0 714 aa9.42□□□□□ -0.9
NEDD8-206ENST00000531430 C22orf39Q6P5X5 142 aa9.42□□□□□ -0.9
NEDD8-206ENST00000531430 KYAT3Q6YP21 454 aaKnown RBP9.42□□□□□ -0.9
NEDD8-206ENST00000531430 ATG14Q6ZNE5 492 aa9.42□□□□□ -0.9
NEDD8-206ENST00000531430 RAB11FIP2Q7L804 512 aa9.42□□□□□ -0.9
NEDD8-206ENST00000531430 VPS36Q86VN1 386 aa9.42□□□□□ -0.9
NEDD8-206ENST00000531430 SLC35F3Q8IY50 421 aa9.42□□□□□ -0.9
NEDD8-206ENST00000531430 Q8N9G6 341 aaPredicted RBP9.42□□□□□ -0.9
NEDD8-206ENST00000531430 SNRNP27Q8WVK2 155 aaKnown RBP9.42□□□□□ -0.9
NEDD8-206ENST00000531430 SNX21Q969T3 373 aa9.42□□□□□ -0.9
NEDD8-206ENST00000531430 PSMB7Q99436 277 aa9.42□□□□□ -0.9
NEDD8-206ENST00000531430 HEPHQ9BQS7 1158 aa9.42□□□□□ -0.9
NEDD8-206ENST00000531430 FOXP3Q9BZS1 431 aa9.42□□□□□ -0.9
NEDD8-206ENST00000531430 SLC13A1Q9BZW2 595 aa9.42□□□□□ -0.9
NEDD8-206ENST00000531430 STRADBQ9C0K7 418 aa9.42□□□□□ -0.9
NEDD8-206ENST00000531430 INTS2Q9H0H0 1204 aaKnown RBP9.42□□□□□ -0.9
NEDD8-206ENST00000531430 PDCL3Q9H2J4 239 aa9.42□□□□□ -0.9
NEDD8-206ENST00000531430 HECAQ9UBI9 543 aaPredicted RBP9.42□□□□□ -0.9
NEDD8-206ENST00000531430 PISDQ9UG56 409 aa9.42□□□□□ -0.9
NEDD8-206ENST00000531430 APOBEC3BQ9UH17 382 aaKnown RBP9.42□□□□□ -0.9
NEDD8-206ENST00000531430 HS3ST2Q9Y278 367 aa9.42□□□□□ -0.9
NEDD8-206ENST00000531430 TBC1D30Q9Y2I9 924 aa9.42□□□□□ -0.9
NEDD8-206ENST00000531430 FCF1Q9Y324 198 aaKnown RBP9.42□□□□□ -0.9
NEDD8-206ENST00000531430 FADS3Q9Y5Q0 445 aa9.42□□□□□ -0.9
NEDD8-206ENST00000531430 FAM237AA0A1B0GTK4 181 aa9.41□□□□□ -0.9
NEDD8-206ENST00000531430 A0A1W2PQ27 194 aa9.41□□□□□ -0.9
NEDD8-206ENST00000531430 A0A1W2PQ64 194 aa9.41□□□□□ -0.9
NEDD8-206ENST00000531430 CDRT15L2A8MXV6 281 aa9.41□□□□□ -0.9
NEDD8-206ENST00000531430 TPP1O14773 563 aa9.41□□□□□ -0.9
NEDD8-206ENST00000531430 PSMA7O14818 248 aa9.41□□□□□ -0.9
NEDD8-206ENST00000531430 PLD2O14939 933 aa9.41□□□□□ -0.9
NEDD8-206ENST00000531430 HSF2BPO75031 334 aa9.41□□□□□ -0.9
NEDD8-206ENST00000531430 TCEA3O75764 348 aa9.41□□□□□ -0.9
NEDD8-206ENST00000531430 FAM87AP0C7U9 286 aa9.41□□□□□ -0.9
NEDD8-206ENST00000531430 TSHRP16473 764 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms