RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 SDC3O75056 442 aa22.7■■□□□ 1.22
TRAPPC4-210ENST00000531290 GPD1P21695 349 aa22.7■■□□□ 1.22
TRAPPC4-210ENST00000531290 ITGB7P26010 798 aa22.7■■□□□ 1.22
TRAPPC4-210ENST00000531290 L1CAMP32004 1257 aa22.7■■□□□ 1.22
TRAPPC4-210ENST00000531290 RFC1P35251 1148 aaPredicted RBP22.7■■□□□ 1.22
TRAPPC4-210ENST00000531290 HNF1BP35680 557 aa22.7■■□□□ 1.22
TRAPPC4-210ENST00000531290 CCNHP51946 323 aaPredicted RBP22.7■■□□□ 1.22
TRAPPC4-210ENST00000531290 CYP4F3Q08477 520 aa22.7■■□□□ 1.22
TRAPPC4-210ENST00000531290 PTP4A2Q12974 167 aa22.7■■□□□ 1.22
TRAPPC4-210ENST00000531290 MANEALQ5VSG8 457 aa22.7■■□□□ 1.22
TRAPPC4-210ENST00000531290 PHF13Q86YI8 300 aaPredicted RBP22.7■■□□□ 1.22
TRAPPC4-210ENST00000531290 ISG20Q96AZ6 181 aaKnown RBP22.7■■□□□ 1.22
TRAPPC4-210ENST00000531290 TBC1D31Q96DN5 1066 aa22.7■■□□□ 1.22
TRAPPC4-210ENST00000531290 FEM1CQ96JP0 617 aa22.7■■□□□ 1.22
TRAPPC4-210ENST00000531290 MAGEH1Q9H213 219 aa22.7■■□□□ 1.22
TRAPPC4-210ENST00000531290 FZD3Q9NPG1 666 aa22.7■■□□□ 1.22
TRAPPC4-210ENST00000531290 NDFIP2Q9NV92 336 aa22.7■■□□□ 1.22
TRAPPC4-210ENST00000531290 TMEM248Q9NWD8 314 aa22.7■■□□□ 1.22
TRAPPC4-210ENST00000531290 ZFR2Q9UPR6 939 aaKnown RBP22.7■■□□□ 1.22
TRAPPC4-210ENST00000531290 DMXL2Q8TDJ6 3036 aa22.7■■□□□ 1.22
TRAPPC4-210ENST00000531290 ANKRD62A6NC57 917 aa22.69■■□□□ 1.22
TRAPPC4-210ENST00000531290 LRRC10BA6NIK2 292 aa22.69■■□□□ 1.22
TRAPPC4-210ENST00000531290 FAM72CH0Y354 149 aa22.69■■□□□ 1.22
TRAPPC4-210ENST00000531290 RAMP2O60895 175 aa22.69■■□□□ 1.22
TRAPPC4-210ENST00000531290 LRIG2O94898 1065 aa22.69■■□□□ 1.22
TRAPPC4-210ENST00000531290 ADRB3P13945 408 aa22.69■■□□□ 1.22
TRAPPC4-210ENST00000531290 CKMT2P17540 419 aa22.69■■□□□ 1.22
TRAPPC4-210ENST00000531290 ACADVLP49748 655 aa22.69■■□□□ 1.22
TRAPPC4-210ENST00000531290 HDAC4P56524 1084 aa22.69■■□□□ 1.22
TRAPPC4-210ENST00000531290 RPS21P63220 83 aaKnown RBP22.69■■□□□ 1.22
TRAPPC4-210ENST00000531290 MAPK8IP2Q13387 824 aaPredicted RBP22.69■■□□□ 1.22
TRAPPC4-210ENST00000531290 CAMK2BQ13554 666 aa22.69■■□□□ 1.22
TRAPPC4-210ENST00000531290 POLD3Q15054 466 aaPredicted RBP22.69■■□□□ 1.22
TRAPPC4-210ENST00000531290 HS1BP3Q53T59 392 aa22.69■■□□□ 1.22
TRAPPC4-210ENST00000531290 FAM72AQ5TYM5 149 aa22.69■■□□□ 1.22
TRAPPC4-210ENST00000531290 SEL1L3Q68CR1 1132 aa22.69■■□□□ 1.22
TRAPPC4-210ENST00000531290 FAM72DQ6L9T8 149 aa22.69■■□□□ 1.22
TRAPPC4-210ENST00000531290 WDR59Q6PJI9 974 aa22.69■■□□□ 1.22
TRAPPC4-210ENST00000531290 KANSL1Q7Z3B3 1105 aa22.69■■□□□ 1.22
TRAPPC4-210ENST00000531290 NLRP14Q86W24 1093 aa22.69■■□□□ 1.22
TRAPPC4-210ENST00000531290 FAM72BQ86X60 149 aa22.69■■□□□ 1.22
TRAPPC4-210ENST00000531290 PLPP6Q8IY26 295 aa22.69■■□□□ 1.22
TRAPPC4-210ENST00000531290 CCDC185Q8N715 623 aa22.69■■□□□ 1.22
TRAPPC4-210ENST00000531290 C3orf20Q8ND61 904 aa22.69■■□□□ 1.22
TRAPPC4-210ENST00000531290 TSC1Q92574 1164 aa22.69■■□□□ 1.22
TRAPPC4-210ENST00000531290 ARHGEF2Q92974 986 aaKnown RBP22.69■■□□□ 1.22
TRAPPC4-210ENST00000531290 CALN1Q9BXU9 219 aa22.69■■□□□ 1.22
TRAPPC4-210ENST00000531290 TM6SF2Q9BZW4 377 aa22.69■■□□□ 1.22
TRAPPC4-210ENST00000531290 ZDHHC6Q9H6R6 413 aa22.69■■□□□ 1.22
TRAPPC4-210ENST00000531290 DKK4Q9UBT3 224 aa22.69■■□□□ 1.22
TRAPPC4-210ENST00000531290 ACTL7AQ9Y615 435 aa22.69■■□□□ 1.22
TRAPPC4-210ENST00000531290 SIGLEC16A6NMB1 481 aa22.68■■□□□ 1.22
TRAPPC4-210ENST00000531290 GSCP56915 257 aaPredicted RBP22.68■■□□□ 1.22
TRAPPC4-210ENST00000531290 CLDN2P57739 230 aa22.68■■□□□ 1.22
TRAPPC4-210ENST00000531290 ILKQ13418 452 aa22.68■■□□□ 1.22
TRAPPC4-210ENST00000531290 KIAA1161Q6NSJ0 714 aa22.68■■□□□ 1.22
TRAPPC4-210ENST00000531290 SLFN11Q7Z7L1 901 aa22.68■■□□□ 1.22
TRAPPC4-210ENST00000531290 OR13H1Q8NG92 308 aa22.68■■□□□ 1.22
TRAPPC4-210ENST00000531290 FAM174AQ8TBP5 190 aa22.68■■□□□ 1.22
TRAPPC4-210ENST00000531290 NTAN1Q96AB6 310 aa22.68■■□□□ 1.22
TRAPPC4-210ENST00000531290 AGPAT1Q99943 283 aa22.68■■□□□ 1.22
TRAPPC4-210ENST00000531290 SLC17A9Q9BYT1 436 aa22.68■■□□□ 1.22
TRAPPC4-210ENST00000531290 MAGEB5Q9BZ81 275 aa22.68■■□□□ 1.22
TRAPPC4-210ENST00000531290 RAXQ9Y2V3 346 aa22.68■■□□□ 1.22
TRAPPC4-210ENST00000531290 FADS3Q9Y5Q0 445 aa22.68■■□□□ 1.22
TRAPPC4-210ENST00000531290 CD160O95971 181 aa22.67■■□□□ 1.22
TRAPPC4-210ENST00000531290 CCDC172P0C7W6 258 aa22.67■■□□□ 1.22
TRAPPC4-210ENST00000531290 C1QBPQ07021 282 aaKnown RBP22.67■■□□□ 1.22
TRAPPC4-210ENST00000531290 TMEM259Q4ZIN3 620 aa22.67■■□□□ 1.22
TRAPPC4-210ENST00000531290 DNAJC24Q6P3W2 148 aa22.67■■□□□ 1.22
TRAPPC4-210ENST00000531290 SCYL2Q6P3W7 929 aa22.67■■□□□ 1.22
TRAPPC4-210ENST00000531290 C19orf48Q6RUI8 117 aa22.67■■□□□ 1.22
TRAPPC4-210ENST00000531290 ZNF354CQ86Y25 554 aa22.67■■□□□ 1.22
TRAPPC4-210ENST00000531290 LRIG1Q96JA1 1093 aa22.67■■□□□ 1.22
TRAPPC4-210ENST00000531290 ERGIC2Q96RQ1 377 aa22.67■■□□□ 1.22
TRAPPC4-210ENST00000531290 NAT10Q9H0A0 1025 aaKnown RBP22.67■■□□□ 1.22
TRAPPC4-210ENST00000531290 GPSM3Q9Y4H4 160 aa22.67■■□□□ 1.22
TRAPPC4-210ENST00000531290 HS3ST3A1Q9Y663 406 aa22.67■■□□□ 1.22
TRAPPC4-210ENST00000531290 NEMP1O14524 444 aa22.66■■□□□ 1.22
TRAPPC4-210ENST00000531290 AP1G1O43747 822 aa22.66■■□□□ 1.22
TRAPPC4-210ENST00000531290 PAK4O96013 591 aaPredicted RBP22.66■■□□□ 1.22
TRAPPC4-210ENST00000531290 PTMSP20962 102 aa22.66■■□□□ 1.22
TRAPPC4-210ENST00000531290 DGKAP23743 735 aa22.66■■□□□ 1.22
TRAPPC4-210ENST00000531290 SNRPD1P62314 119 aaKnown RBP22.66■■□□□ 1.22
TRAPPC4-210ENST00000531290 SGCGQ13326 291 aa22.66■■□□□ 1.22
TRAPPC4-210ENST00000531290 ZNF211Q13398 564 aaPredicted RBP22.66■■□□□ 1.22
TRAPPC4-210ENST00000531290 EFHC2Q5JST6 749 aa22.66■■□□□ 1.22
TRAPPC4-210ENST00000531290 LEKR1Q6ZMV7 388 aa22.66■■□□□ 1.22
TRAPPC4-210ENST00000531290 Q6ZSR6 202 aa22.66■■□□□ 1.22
TRAPPC4-210ENST00000531290 PARS2Q7L3T8 475 aaKnown RBP22.66■■□□□ 1.22
TRAPPC4-210ENST00000531290 ABI3BPQ7Z7G0 1075 aa22.66■■□□□ 1.22
TRAPPC4-210ENST00000531290 ZSCAN30Q86W11 494 aa22.66■■□□□ 1.22
TRAPPC4-210ENST00000531290 DCP2Q8IU60 420 aaKnown RBP22.66■■□□□ 1.22
TRAPPC4-210ENST00000531290 SLC25A45Q8N413 288 aa22.66■■□□□ 1.22
TRAPPC4-210ENST00000531290 OR6K2Q8NGY2 324 aa22.66■■□□□ 1.22
TRAPPC4-210ENST00000531290 PLXNA2O75051 1894 aa22.66■■□□□ 1.22
TRAPPC4-210ENST00000531290 ZSCAN5CA6NGD5 496 aaPredicted RBP22.65■■□□□ 1.22
TRAPPC4-210ENST00000531290 C16orf96A6NNT2 1141 aa22.65■■□□□ 1.22
TRAPPC4-210ENST00000531290 A6NNZ2 444 aa22.65■■□□□ 1.22
TRAPPC4-210ENST00000531290 KRIT1O00522 736 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms