RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 H2AFYO75367 372 aaKnown RBP5.68□□□□□ -1.5
PCF11-205ENST00000530906 RASSF9O75901 435 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 ANXA9O76027 345 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 BEST1O76090 585 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 USP1O94782 785 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 RTN3O95197 1032 aaPredicted RBP5.68□□□□□ -1.5
PCF11-205ENST00000530906 METTL18O95568 372 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 APOA4P06727 396 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 USP17L7P0C7H9 530 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 CCNB1P14635 433 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 VAV1P15498 845 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 CREB1P16220 341 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 CTGFP29279 349 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 FOXN2P32314 431 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 GP5P40197 560 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 ETV4P43268 484 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 CDK7P50613 346 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 KPNA1P52294 538 aaPredicted RBP5.68□□□□□ -1.5
PCF11-205ENST00000530906 GAD2Q05329 585 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 FAAP100Q0VG06 881 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 AP1B1Q10567 949 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 WASHC5Q12768 1159 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 BNIP1Q12981 228 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 NME3Q13232 169 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 BFSP2Q13515 415 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 EIF4EBP2Q13542 120 aaPredicted RBP5.68□□□□□ -1.5
PCF11-205ENST00000530906 ANO4Q32M45 955 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 NOMO2Q5JPE7 1267 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 SYPL2Q5VXT5 272 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 BHLHA9Q7RTU4 235 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 MON1AQ86VX9 555 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 IGDCC3Q8IVU1 814 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 SUGP1Q8IWZ8 645 aaKnown RBP5.68□□□□□ -1.5
PCF11-205ENST00000530906 CTAGE3PQ8IX95 158 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 ZNF567Q8N184 647 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 C4orf33Q8N1A6 199 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 ZNF276Q8N554 614 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 PPM1NQ8N819 430 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 CCNYQ8ND76 341 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 C3orf58Q8NDZ4 430 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 TCP10LQ8TDR4 215 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 DQX1Q8TE96 717 aaKnown RBP5.68□□□□□ -1.5
PCF11-205ENST00000530906 DEPDC1BQ8WUY9 529 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 SREK1Q8WXA9 508 aaKnown RBP5.68□□□□□ -1.5
PCF11-205ENST00000530906 INPP5DQ92835 1189 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 ISL2Q96A47 359 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 TBC1D31Q96DN5 1066 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 CFAP36Q96G28 342 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 C7orf26Q96N11 449 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 LRRC37BQ96QE4 947 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 RAB3IPQ96QF0 476 aaPredicted RBP5.68□□□□□ -1.5
PCF11-205ENST00000530906 SRPK1Q96SB4 655 aaKnown RBP5.68□□□□□ -1.5
PCF11-205ENST00000530906 CDK5RAP1Q96SZ6 601 aaKnown RBP5.68□□□□□ -1.5
PCF11-205ENST00000530906 LGMNQ99538 433 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 CPNE1Q99829 537 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 RTP3Q9BQQ7 232 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 MRPL9Q9BYD2 267 aaKnown RBP5.68□□□□□ -1.5
PCF11-205ENST00000530906 IL22Q9GZX6 179 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 CHRDQ9H2X0 955 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 STN1Q9H668 368 aaKnown RBP5.68□□□□□ -1.5
PCF11-205ENST00000530906 MANSC1Q9H8J5 431 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 C10orf88Q9H8K7 445 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 SAR1AQ9NR31 198 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 TMEM161AQ9NX61 479 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 MIOSQ9NXC5 875 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 SIRPGQ9P1W8 387 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 KLHL8Q9P2G9 620 aaPredicted RBP5.68□□□□□ -1.5
PCF11-205ENST00000530906 TXNDC16Q9P2K2 825 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 OR12D3Q9UGF7 316 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 DCDC2Q9UHG0 476 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 GRID1Q9ULK0 1009 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 GABRQQ9UN88 632 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 SCML2Q9UQR0 700 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 MTO1Q9Y2Z2 717 aaKnown RBP5.68□□□□□ -1.5
PCF11-205ENST00000530906 PLLPQ9Y342 182 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 PLXNA3P51805 1871 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 NLRC5Q86WI3 1866 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 FNDC1Q4ZHG4 1894 aaPredicted RBP5.67□□□□□ -1.5
PCF11-205ENST00000530906 FAM92AA1XBS5 289 aa5.67□□□□□ -1.5
PCF11-205ENST00000530906 MEIS3P2A8K0S8 358 aa5.67□□□□□ -1.5
PCF11-205ENST00000530906 H7C4K7 107 aa5.67□□□□□ -1.5
PCF11-205ENST00000530906 DNM1LO00429 736 aa5.67□□□□□ -1.5
PCF11-205ENST00000530906 TRAFD1O14545 582 aaPredicted RBP5.67□□□□□ -1.5
PCF11-205ENST00000530906 TIMM44O43615 452 aa5.67□□□□□ -1.5
PCF11-205ENST00000530906 MGEA5O60502 916 aa5.67□□□□□ -1.5
PCF11-205ENST00000530906 DNAJC6O75061 913 aa5.67□□□□□ -1.5
PCF11-205ENST00000530906 SPAG7O75391 227 aa5.67□□□□□ -1.5
PCF11-205ENST00000530906 BANF1O75531 89 aa5.67□□□□□ -1.5
PCF11-205ENST00000530906 RFPL1O75677 317 aa5.67□□□□□ -1.5
PCF11-205ENST00000530906 LRIG2O94898 1065 aa5.67□□□□□ -1.5
PCF11-205ENST00000530906 SNUPNO95149 360 aaKnown RBP5.67□□□□□ -1.5
PCF11-205ENST00000530906 UNC5CO95185 931 aa5.67□□□□□ -1.5
PCF11-205ENST00000530906 WNT11O96014 354 aa5.67□□□□□ -1.5
PCF11-205ENST00000530906 RPLP1P05386 114 aaKnown RBP5.67□□□□□ -1.5
PCF11-205ENST00000530906 CKBP12277 381 aa5.67□□□□□ -1.5
PCF11-205ENST00000530906 CES1P23141 567 aa5.67□□□□□ -1.5
PCF11-205ENST00000530906 BDNFP23560 247 aa5.67□□□□□ -1.5
PCF11-205ENST00000530906 GRK2P25098 689 aa5.67□□□□□ -1.5
PCF11-205ENST00000530906 ADRA1DP25100 572 aa5.67□□□□□ -1.5
PCF11-205ENST00000530906 PTPN3P26045 913 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms