RNA–Protein interactions for RNA: ENST00000528999.5

PUF60-213, Transcript of poly(U) binding splicing factor 60, human

TSL 3

Gene PUF60, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUF60-213	ENST00000528999	TSPAN17	Q96FV3	270 aa		10.85	□□□□□ -0.67
PUF60-213	ENST00000528999	AGAP2	Q99490	1192 aa		10.85	□□□□□ -0.67
PUF60-213	ENST00000528999	SORT1	Q99523	831 aa		10.85	□□□□□ -0.67
PUF60-213	ENST00000528999	FSD1L	Q9BXM9	530 aa		10.85	□□□□□ -0.67
PUF60-213	ENST00000528999	C20orf27	Q9GZN8	174 aa		10.85	□□□□□ -0.67
PUF60-213	ENST00000528999	ILKAP	Q9H0C8	392 aa	Predicted RBP	10.85	□□□□□ -0.67
PUF60-213	ENST00000528999	FBXO6	Q9NRD1	293 aa	Predicted RBP	10.85	□□□□□ -0.67
PUF60-213	ENST00000528999	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	10.85	□□□□□ -0.67
PUF60-213	ENST00000528999	PIH1D1	Q9NWS0	290 aa	Known RBP	10.85	□□□□□ -0.67
PUF60-213	ENST00000528999	HSFX1	Q9UBD0	423 aa		10.85	□□□□□ -0.67
PUF60-213	ENST00000528999	DNAJB4	Q9UDY4	337 aa		10.85	□□□□□ -0.67
PUF60-213	ENST00000528999	MAGED2	Q9UNF1	606 aa	Predicted RBP	10.85	□□□□□ -0.67
PUF60-213	ENST00000528999	C15orf41	Q9Y2V0	281 aa		10.85	□□□□□ -0.67
PUF60-213	ENST00000528999	LRRC42	Q9Y546	428 aa		10.85	□□□□□ -0.67
PUF60-213	ENST00000528999	NUMBL	Q9Y6R0	609 aa		10.85	□□□□□ -0.67
PUF60-213	ENST00000528999	TDRD15	B5MCY1	1934 aa	Known RBP	10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	ZNF195	O14628	629 aa		10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	SLC7A4	O43246	635 aa		10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	PEX11A	O75192	247 aa		10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	PENK	P01210	267 aa	Predicted RBP	10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	AHSG	P02765	367 aa		10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	MYCN	P04198	464 aa	Predicted RBP	10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	HAPLN1	P10915	354 aa	Predicted RBP	10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	ELN	P15502	786 aa		10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	GNAZ	P19086	355 aa		10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	KCNA4	P22459	653 aa		10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	CES1	P23141	567 aa		10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	PGM1	P36871	562 aa		10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	CD151	P48509	253 aa		10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	IDH3A	P50213	366 aa		10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	SERPINH1	P50454	418 aa	Known RBP	10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	WNT3A	P56704	352 aa		10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	DNAJB13	P59910	316 aa		10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	RAB10	P61026	200 aa		10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	TUBB3	Q13509	450 aa		10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	MBTPS1	Q14703	1052 aa		10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	ZRSR2	Q15696	482 aa	Known RBP	10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	MS4A13	Q5J8X5	152 aa		10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	RABGAP1L	Q5R372	815 aa		10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	PIK3R6	Q5UE93	754 aa		10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	SNX30	Q5VWJ9	437 aa		10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	LIPM	Q5VYY2	423 aa		10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	LHX8	Q68G74	356 aa		10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	NEPRO	Q6NW34	567 aa		10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	EPGN	Q6UW88	154 aa		10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	NET1	Q7Z628	596 aa	Predicted RBP	10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	C14orf80	Q86SX3	495 aa		10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	ALYREF	Q86V81	257 aa	Known RBP	10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	SLAIN1	Q8ND83	568 aa		10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	PDZD8	Q8NEN9	1154 aa		10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	IPMK	Q8NFU5	416 aa		10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	SPATA22	Q8NHS9	363 aa		10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	RAET1E	Q8TD07	263 aa		10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	STYX	Q8WUJ0	223 aa		10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	SEPT8	Q92599	483 aa		10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	FBXO32	Q969P5	355 aa		10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	RSRC1	Q96IZ7	334 aa	Known RBP	10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	MRGPRX2	Q96LB1	330 aa		10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	NUDCD1	Q96RS6	583 aa		10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	ZIC5	Q96T25	663 aa		10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	MIPEP	Q99797	713 aa		10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	FICD	Q9BVA6	458 aa		10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	TTLL2	Q9BWV7	592 aa		10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	C1QTNF1	Q9BXJ1	281 aa		10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	DRC3	Q9H069	523 aa		10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	CDH19	Q9H159	772 aa		10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	DENND2D	Q9H6A0	471 aa	Predicted RBP	10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	NOL6	Q9H6R4	1146 aa	Known RBP	10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	HMX1	Q9NP08	348 aa	Predicted RBP	10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	STARD7	Q9NQZ5	370 aa		10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	BATF3	Q9NR55	127 aa		10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	MARCH2	Q9P0N8	246 aa		10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	STOML1	Q9UBI4	398 aa		10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	MCM8	Q9UJA3	840 aa		10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	CORO1C	Q9ULV4	474 aa	Predicted RBP	10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	RAP2C	Q9Y3L5	183 aa		10.84	□□□□□ -0.67
PUF60-213	ENST00000528999	NLRC5	Q86WI3	1866 aa		10.83	□□□□□ -0.68
PUF60-213	ENST00000528999	GOLGA8Q	A0A0J9YX86	632 aa		10.83	□□□□□ -0.68
PUF60-213	ENST00000528999	CCDC195	A0A1B0GUA6	201 aa		10.83	□□□□□ -0.68
PUF60-213	ENST00000528999	LOC285095	A0A1B0GVY8	99 aa		10.83	□□□□□ -0.68
PUF60-213	ENST00000528999		A0A1W2PQ45	241 aa	Predicted RBP	10.83	□□□□□ -0.68
PUF60-213	ENST00000528999		A0A1W2PQY0	241 aa		10.83	□□□□□ -0.68
PUF60-213	ENST00000528999	GOLGA8O	A6NCC3	632 aa		10.83	□□□□□ -0.68
PUF60-213	ENST00000528999	TARM1	B6A8C7	271 aa		10.83	□□□□□ -0.68
PUF60-213	ENST00000528999	GOLGA8N	F8WBI6	632 aa		10.83	□□□□□ -0.68
PUF60-213	ENST00000528999	PITPNM1	O00562	1244 aa		10.83	□□□□□ -0.68
PUF60-213	ENST00000528999	MSI1	O43347	362 aa	Known RBP	10.83	□□□□□ -0.68
PUF60-213	ENST00000528999	ITM2A	O43736	263 aa		10.83	□□□□□ -0.68
PUF60-213	ENST00000528999	NPHS1	O60500	1241 aa		10.83	□□□□□ -0.68
PUF60-213	ENST00000528999	TM7SF2	O76062	418 aa		10.83	□□□□□ -0.68
PUF60-213	ENST00000528999	HSPA4L	O95757	839 aa		10.83	□□□□□ -0.68
PUF60-213	ENST00000528999	HLA-DQB2	P05538	268 aa		10.83	□□□□□ -0.68
PUF60-213	ENST00000528999	TPBGL	P0DKB5	382 aa		10.83	□□□□□ -0.68
PUF60-213	ENST00000528999	STMN1	P16949	149 aa		10.83	□□□□□ -0.68
PUF60-213	ENST00000528999	LEPR	P48357	1165 aa	Known RBP	10.83	□□□□□ -0.68
PUF60-213	ENST00000528999	TUFM	P49411	452 aa	Known RBP	10.83	□□□□□ -0.68
PUF60-213	ENST00000528999	NUMB	P49757	651 aa		10.83	□□□□□ -0.68
PUF60-213	ENST00000528999	CLCN5	P51795	746 aa		10.83	□□□□□ -0.68
PUF60-213	ENST00000528999	IRX4	P78413	519 aa		10.83	□□□□□ -0.68
PUF60-213	ENST00000528999	PRKAA1	Q13131	559 aa		10.83	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms