RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 NPWQ8N729 165 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 TMIEQ8NEW7 156 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 FLCNQ8NFG4 579 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 OR7D4Q8NG98 312 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 SLC35B2Q8TB61 432 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 USP33Q8TEY7 942 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 SLCO2A1Q92959 643 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 RAB7BQ96AH8 199 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 CHFRQ96EP1 664 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 P2RY11Q96G91 374 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 NUDCD1Q96RS6 583 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 IL12RB2Q99665 862 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 HEPHQ9BQS7 1158 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 FRMD8Q9BZ67 464 aaPredicted RBP8.06□□□□□ -1.12
SSBP3-211ENST00000528787 FAM129AQ9BZQ8 928 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 RAB17Q9H0T7 212 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 TSPYL1Q9H0U9 437 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 CHRDQ9H2X0 955 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 ZDHHC4Q9NPG8 344 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 SCUBE2Q9NQ36 999 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 RBM22Q9NW64 420 aaKnown RBP eCLIP8.06□□□□□ -1.12
SSBP3-211ENST00000528787 KCTD5Q9NXV2 234 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.06□□□□□ -1.12
SSBP3-211ENST00000528787 IL36AQ9UHA7 158 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 PCYOX1Q9UHG3 505 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 RPL26L1Q9UNX3 145 aaKnown RBP8.06□□□□□ -1.12
SSBP3-211ENST00000528787 MFHAS1Q9Y4C4 1052 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 STON1Q9Y6Q2 735 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 CKAP5Q14008 2032 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 COL6A3P12111 3177 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 EYSQ5T1H1 3165 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 NYNRINQ9P2P1 1898 aaKnown RBP8.05□□□□□ -1.12
SSBP3-211ENST00000528787 CCDC163A0A0D9SF12 145 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 KRBA1A5PL33 1030 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 FAM187AA6NFU0 413 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 PRRT4C9JH25 899 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 E7EVH7 732 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 RNF103O00237 685 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 KCNN4O15554 427 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 SLC7A4O43246 635 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 RNF40O75150 1001 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 GCATO75600 419 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 TMCC1O94876 653 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 PAPSS2O95340 614 aaPredicted RBP8.05□□□□□ -1.12
SSBP3-211ENST00000528787 KLF8O95600 359 aaPredicted RBP8.05□□□□□ -1.12
SSBP3-211ENST00000528787 APBB3O95704 486 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 EGFP01133 1207 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 EPOP01588 193 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 TUBBP07437 444 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 SRCP12931 536 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 C5AR1P21730 350 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 XPAP23025 273 aaPredicted RBP8.05□□□□□ -1.12
SSBP3-211ENST00000528787 OXTRP30559 389 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 HOXA6P31267 233 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 ACVRL1P37023 503 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 CXCL12P48061 93 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 LMAN1P49257 510 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 ARF5P84085 180 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 CDK16Q00536 496 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 PDE1BQ01064 536 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 BCL2L1Q07817 233 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 MPP3Q13368 585 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 CAMK2GQ13555 558 aaPredicted RBP8.05□□□□□ -1.12
SSBP3-211ENST00000528787 PARP6Q2NL67 630 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 C2orf27AQ580R0 203 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 ZNF776Q68DI1 518 aaPredicted RBP8.05□□□□□ -1.12
SSBP3-211ENST00000528787 ALG1LQ6GMV1 187 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 NAPEPLDQ6IQ20 393 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 BRAT1Q6PJG6 821 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 TXNDC11Q6PKC3 985 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 PPP1R21Q6ZMI0 780 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 ZNF572Q7Z3I7 529 aaPredicted RBP8.05□□□□□ -1.12
SSBP3-211ENST00000528787 CPNE8Q86YQ8 564 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 CREG2Q8IUH2 290 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 RAVER1Q8IY67 606 aaKnown RBP8.05□□□□□ -1.12
SSBP3-211ENST00000528787 FBXL6Q8N531 539 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 TSTD1Q8NFU3 115 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 OR2T3Q8NH03 318 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 RPLP0P6Q8NHW5 317 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 WFDC5Q8TCV5 224 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 COG1Q8WTW3 980 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 PRCCQ92733 491 aaPredicted RBP8.05□□□□□ -1.12
SSBP3-211ENST00000528787 PBXIP1Q96AQ6 731 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 RTP4Q96DX8 246 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 MYEOVQ96EZ4 313 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 IFT43Q96FT9 208 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 SPACA7Q96KW9 195 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 CAPZA3Q96KX2 299 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 TEKT5Q96M29 485 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 SPATA13Q96N96 652 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 MGME1Q9BQP7 344 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 FSD1LQ9BXM9 530 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 SLC25A51Q9H1U9 297 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 TMEM245Q9H330 911 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 KDM4CQ9H3R0 1056 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 NOL6Q9H6R4 1146 aaKnown RBP8.05□□□□□ -1.12
SSBP3-211ENST00000528787 PDFQ9HBH1 243 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 NDFIP2Q9NV92 336 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 ETNK2Q9NVF9 386 aa8.05□□□□□ -1.12
SSBP3-211ENST00000528787 SEPT10Q9P0V9 454 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms