RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 VASPP50552 380 aaPredicted RBP12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 LMNB2Q03252 620 aa12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 CCINQ13939 588 aa12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 DLG2Q15700 870 aa12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 ANKRD20A2Q5SQ80 823 aa12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 ANKRD20A1Q5TYW2 823 aa12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 ANKRD20A3Q5VUR7 823 aa12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 CWF19L1Q69YN2 538 aaKnown RBP12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 GSTA5Q7RTV2 222 aa12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 CCDC110Q8TBZ0 833 aa12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 FRS2Q8WU20 508 aa12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 UCMAQ8WVF2 138 aa12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 CASKIN2Q8WXE0 1202 aa12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 SLCO2A1Q92959 643 aa12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 TEKT5Q96M29 485 aa12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 SPATA13Q96N96 652 aa12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 PSKH2Q96QS6 385 aa12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 LRFN3Q9BTN0 628 aa12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 MTG2Q9H4K7 406 aa12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 NT5MQ9NPB1 228 aa12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 THAP10Q9P2Z0 257 aaPredicted RBP12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 LHX3Q9UBR4 397 aa12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 SEPT3Q9UH03 358 aa12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 ATP8A1Q9Y2Q0 1164 aa12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 MTF2Q9Y483 593 aaPredicted RBP12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 TTI1O43156 1089 aa12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 GCATO75600 419 aa12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 GJB3O75712 270 aa12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 TUBBP07437 444 aa12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 HNRNPLP14866 589 aaKnown RBP eCLIP12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 TARSP26639 723 aaKnown RBP12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 CD68P34810 354 aaPredicted RBP12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 RPL22P35268 128 aaKnown RBP12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 TIE1P35590 1138 aa12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 IL12RB1P42701 662 aa12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 MAXP61244 160 aa12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 DR1Q01658 176 aa12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 ZNF235Q14590 738 aa12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 TRIP13Q15645 432 aaPredicted RBP12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 ELF2Q15723 593 aa12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 ACCSLQ4AC99 568 aa12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 FNDC3BQ53EP0 1204 aaKnown RBP12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 C2orf27AQ580R0 203 aa12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 C22orf39Q6P5X5 142 aa12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 PID1Q7Z2X4 250 aa12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 MMGT1Q8N4V1 131 aa12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 ZNF366Q8N895 744 aa12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 ZNF513Q8N8E2 541 aaPredicted RBP12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 KDM1BQ8NB78 822 aa12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 GRK7Q8WTQ7 553 aa12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 SHDQ96IW2 340 aa12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 EXOC2Q96KP1 924 aa12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 VAT1Q99536 393 aa12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 FERMT1Q9BQL6 677 aa12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 CINPQ9BW66 212 aaPredicted RBP12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 TNKS2Q9H2K2 1166 aa12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 TMEM245Q9H330 911 aa12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 CACNA2D2Q9NY47 1150 aa12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 KLHL8Q9P2G9 620 aaPredicted RBP12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 FEZ2Q9UHY8 353 aaPredicted RBP12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 KMT2EQ8IZD2 1858 aa12.35□□□□□ -0.43
TRAF3IP2-211ENST00000528599 KANSL1LA0AUZ9 987 aa12.34□□□□□ -0.43
TRAF3IP2-211ENST00000528599 TTC24A2A3L6 582 aaPredicted RBP12.34□□□□□ -0.43
TRAF3IP2-211ENST00000528599 PRR33A8MZF0 331 aa12.34□□□□□ -0.43
TRAF3IP2-211ENST00000528599 RAD51CO43502 376 aa12.34□□□□□ -0.43
TRAF3IP2-211ENST00000528599 PI15O43692 258 aa12.34□□□□□ -0.43
TRAF3IP2-211ENST00000528599 ZNF189O75820 626 aaPredicted RBP12.34□□□□□ -0.43
TRAF3IP2-211ENST00000528599 STK10O94804 968 aaKnown RBP12.34□□□□□ -0.43
TRAF3IP2-211ENST00000528599 ECEL1O95672 775 aa12.34□□□□□ -0.43
TRAF3IP2-211ENST00000528599 KRT14P02533 472 aa12.34□□□□□ -0.43
TRAF3IP2-211ENST00000528599 CHRNB1P11230 501 aa12.34□□□□□ -0.43
TRAF3IP2-211ENST00000528599 HLA-EP13747 358 aa12.34□□□□□ -0.43
TRAF3IP2-211ENST00000528599 PRKCHP24723 683 aa12.34□□□□□ -0.43
TRAF3IP2-211ENST00000528599 NNMTP40261 264 aa12.34□□□□□ -0.43
TRAF3IP2-211ENST00000528599 WASP42768 502 aa12.34□□□□□ -0.43
TRAF3IP2-211ENST00000528599 RHOAP61586 193 aa12.34□□□□□ -0.43
TRAF3IP2-211ENST00000528599 ST8SIA6P61647 398 aa12.34□□□□□ -0.43
TRAF3IP2-211ENST00000528599 FZD5Q13467 585 aa12.34□□□□□ -0.43
TRAF3IP2-211ENST00000528599 ENPP2Q13822 863 aa12.34□□□□□ -0.43
TRAF3IP2-211ENST00000528599 DHX34Q14147 1143 aaKnown RBP12.34□□□□□ -0.43
TRAF3IP2-211ENST00000528599 IHHQ14623 411 aa12.34□□□□□ -0.43
TRAF3IP2-211ENST00000528599 P3H1Q32P28 736 aa12.34□□□□□ -0.43
TRAF3IP2-211ENST00000528599 ATXN7L2Q5T6C5 722 aaPredicted RBP12.34□□□□□ -0.43
TRAF3IP2-211ENST00000528599 SERPINA13PQ6UXR4 307 aa12.34□□□□□ -0.43
TRAF3IP2-211ENST00000528599 Q6ZVU0 165 aa12.34□□□□□ -0.43
TRAF3IP2-211ENST00000528599 JAMLQ86YT9 394 aa12.34□□□□□ -0.43
TRAF3IP2-211ENST00000528599 TAB3Q8N5C8 712 aaPredicted RBP12.34□□□□□ -0.43
TRAF3IP2-211ENST00000528599 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.34□□□□□ -0.43
TRAF3IP2-211ENST00000528599 CCDC89Q8N998 374 aa12.34□□□□□ -0.43
TRAF3IP2-211ENST00000528599 ISG20Q96AZ6 181 aaKnown RBP12.34□□□□□ -0.43
TRAF3IP2-211ENST00000528599 NSMCE3Q96MG7 304 aa12.34□□□□□ -0.43
TRAF3IP2-211ENST00000528599 RUNDC3BQ96NL0 473 aa12.34□□□□□ -0.43
TRAF3IP2-211ENST00000528599 MGME1Q9BQP7 344 aa12.34□□□□□ -0.43
TRAF3IP2-211ENST00000528599 TM6SF2Q9BZW4 377 aa12.34□□□□□ -0.43
TRAF3IP2-211ENST00000528599 FOXQ1Q9C009 403 aa12.34□□□□□ -0.43
TRAF3IP2-211ENST00000528599 CEP44Q9C0F1 390 aa12.34□□□□□ -0.43
TRAF3IP2-211ENST00000528599 GLOD4Q9HC38 313 aa12.34□□□□□ -0.43
TRAF3IP2-211ENST00000528599 LTB4R2Q9NPC1 389 aa12.34□□□□□ -0.43
TRAF3IP2-211ENST00000528599 TRHDEQ9UKU6 1024 aa12.34□□□□□ -0.43
TRAF3IP2-211ENST00000528599 TTLL3Q9Y4R7 772 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms