RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 SASS6Q6UVJ0 657 aa10.78□□□□□ -0.68
CPSF1-203ENST00000527916 MMS22LQ6ZRQ5 1243 aa10.78□□□□□ -0.68
CPSF1-203ENST00000527916 APCDD1Q8J025 514 aa10.78□□□□□ -0.68
CPSF1-203ENST00000527916 CCAR2Q8N163 923 aaKnown RBP10.78□□□□□ -0.68
CPSF1-203ENST00000527916 TPCN2Q8NHX9 752 aa10.78□□□□□ -0.68
CPSF1-203ENST00000527916 IFI44Q8TCB0 444 aa10.78□□□□□ -0.68
CPSF1-203ENST00000527916 C1orf74Q96LT6 269 aa10.78□□□□□ -0.68
CPSF1-203ENST00000527916 SPAG5Q96R06 1193 aa10.78□□□□□ -0.68
CPSF1-203ENST00000527916 WDCPQ9H6R7 721 aa10.78□□□□□ -0.68
CPSF1-203ENST00000527916 STARD5Q9NSY2 213 aa10.78□□□□□ -0.68
CPSF1-203ENST00000527916 WDR70Q9NW82 654 aa10.78□□□□□ -0.68
CPSF1-203ENST00000527916 ARHGEF38Q9NXL2 777 aa10.78□□□□□ -0.68
CPSF1-203ENST00000527916 SLCO3A1Q9UIG8 710 aa10.78□□□□□ -0.68
CPSF1-203ENST00000527916 STAP1Q9ULZ2 295 aa10.78□□□□□ -0.68
CPSF1-203ENST00000527916 PAXBP1Q9Y5B6 917 aa10.78□□□□□ -0.68
CPSF1-203ENST00000527916 NYNRINQ9P2P1 1898 aaKnown RBP10.78□□□□□ -0.68
CPSF1-203ENST00000527916 USP9YO00507 2555 aaPredicted RBP10.77□□□□□ -0.68
CPSF1-203ENST00000527916 SCAMP1O15126 338 aa10.77□□□□□ -0.69
CPSF1-203ENST00000527916 RTN2O75298 545 aa10.77□□□□□ -0.69
CPSF1-203ENST00000527916 CLDN11O75508 207 aa10.77□□□□□ -0.69
CPSF1-203ENST00000527916 PIAS2O75928 621 aa10.77□□□□□ -0.69
CPSF1-203ENST00000527916 GJB6O95452 261 aa10.77□□□□□ -0.69
CPSF1-203ENST00000527916 ITGB2P05107 769 aa10.77□□□□□ -0.69
CPSF1-203ENST00000527916 CTSOP43234 321 aaPredicted RBP10.77□□□□□ -0.69
CPSF1-203ENST00000527916 NME3Q13232 169 aa10.77□□□□□ -0.69
CPSF1-203ENST00000527916 CLN3Q13286 438 aa10.77□□□□□ -0.69
CPSF1-203ENST00000527916 KRT31Q15323 416 aa10.77□□□□□ -0.69
CPSF1-203ENST00000527916 KIF26BQ2KJY2 2108 aa10.77□□□□□ -0.69
CPSF1-203ENST00000527916 SLC25A52Q3SY17 297 aa10.77□□□□□ -0.69
CPSF1-203ENST00000527916 POM121L1PQ3SYA9 428 aa10.77□□□□□ -0.69
CPSF1-203ENST00000527916 FKBP15Q5T1M5 1219 aa10.77□□□□□ -0.69
CPSF1-203ENST00000527916 CXorf57Q6NSI4 855 aaKnown RBP10.77□□□□□ -0.69
CPSF1-203ENST00000527916 FOXR1Q6PIV2 292 aa10.77□□□□□ -0.69
CPSF1-203ENST00000527916 RBM44Q6ZP01 1051 aaKnown RBP10.77□□□□□ -0.69
CPSF1-203ENST00000527916 USP53Q70EK8 1073 aa10.77□□□□□ -0.69
CPSF1-203ENST00000527916 BNIPLQ7Z465 357 aa10.77□□□□□ -0.69
CPSF1-203ENST00000527916 NOP9Q86U38 636 aaKnown RBP10.77□□□□□ -0.69
CPSF1-203ENST00000527916 XYLT1Q86Y38 959 aa10.77□□□□□ -0.69
CPSF1-203ENST00000527916 EXD3Q8N9H8 876 aa10.77□□□□□ -0.69
CPSF1-203ENST00000527916 MSANTD4Q8NCY6 345 aa10.77□□□□□ -0.69
CPSF1-203ENST00000527916 WDR36Q8NI36 951 aaKnown RBP10.77□□□□□ -0.69
CPSF1-203ENST00000527916 EPS8L1Q8TE68 723 aa10.77□□□□□ -0.69
CPSF1-203ENST00000527916 PTPRN2Q92932 1015 aa10.77□□□□□ -0.69
CPSF1-203ENST00000527916 FAM131CQ96AQ9 280 aa10.77□□□□□ -0.69
CPSF1-203ENST00000527916 ALG14Q96F25 216 aa10.77□□□□□ -0.69
CPSF1-203ENST00000527916 IFT43Q96FT9 208 aa10.77□□□□□ -0.69
CPSF1-203ENST00000527916 ATXN7L3BQ96GX2 97 aa10.77□□□□□ -0.69
CPSF1-203ENST00000527916 RPRD1AQ96P16 312 aaPredicted RBP10.77□□□□□ -0.69
CPSF1-203ENST00000527916 VPS16Q9H269 839 aa10.77□□□□□ -0.69
CPSF1-203ENST00000527916 GANQ9H2C0 597 aa10.77□□□□□ -0.69
CPSF1-203ENST00000527916 PREBQ9HCU5 417 aa10.77□□□□□ -0.69
CPSF1-203ENST00000527916 ANO10Q9NW15 660 aa10.77□□□□□ -0.69
CPSF1-203ENST00000527916 FANCLQ9NW38 375 aa10.77□□□□□ -0.69
CPSF1-203ENST00000527916 TAB2Q9NYJ8 693 aa10.77□□□□□ -0.69
CPSF1-203ENST00000527916 ANKMY1Q9P2S6 941 aa10.77□□□□□ -0.69
CPSF1-203ENST00000527916 LIMA1Q9UHB6 759 aaKnown RBP10.77□□□□□ -0.69
CPSF1-203ENST00000527916 TMEM59LQ9UK28 342 aa10.77□□□□□ -0.69
CPSF1-203ENST00000527916 ATXN7L1Q9ULK2 861 aaPredicted RBP10.77□□□□□ -0.69
CPSF1-203ENST00000527916 TBC1D30Q9Y2I9 924 aa10.77□□□□□ -0.69
CPSF1-203ENST00000527916 OR51B4Q9Y5P0 310 aa10.77□□□□□ -0.69
CPSF1-203ENST00000527916 HS3ST4Q9Y661 456 aa10.77□□□□□ -0.69
CPSF1-203ENST00000527916 SPTBN1Q01082 2364 aaKnown RBP10.77□□□□□ -0.69
CPSF1-203ENST00000527916 CREBBPQ92793 2442 aa10.77□□□□□ -0.69
CPSF1-203ENST00000527916 RP1P56715 2156 aa10.76□□□□□ -0.69
CPSF1-203ENST00000527916 SYNJ2BP-COX16A0A087WUM0 186 aa10.76□□□□□ -0.69
CPSF1-203ENST00000527916 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.76□□□□□ -0.69
CPSF1-203ENST00000527916 DRGXA6NNA5 263 aa10.76□□□□□ -0.69
CPSF1-203ENST00000527916 CDRT15L2A8MXV6 281 aa10.76□□□□□ -0.69
CPSF1-203ENST00000527916 C1QTNF3-AMACRE9PGA6 284 aa10.76□□□□□ -0.69
CPSF1-203ENST00000527916 K7ESM1 405 aa10.76□□□□□ -0.69
CPSF1-203ENST00000527916 SUV39H1O43463 412 aa10.76□□□□□ -0.69
CPSF1-203ENST00000527916 PAGE1O75459 146 aa10.76□□□□□ -0.69
CPSF1-203ENST00000527916 TCEA3O75764 348 aa10.76□□□□□ -0.69
CPSF1-203ENST00000527916 ENDOD1O94919 500 aa10.76□□□□□ -0.69
CPSF1-203ENST00000527916 TNFSF15O95150 251 aa10.76□□□□□ -0.69
CPSF1-203ENST00000527916 CYP1A1P04798 512 aaPredicted RBP10.76□□□□□ -0.69
CPSF1-203ENST00000527916 MMEP08473 750 aa10.76□□□□□ -0.69
CPSF1-203ENST00000527916 AKT2P31751 481 aa10.76□□□□□ -0.69
CPSF1-203ENST00000527916 CDH4P55283 916 aa10.76□□□□□ -0.69
CPSF1-203ENST00000527916 JAM2P57087 298 aa10.76□□□□□ -0.69
CPSF1-203ENST00000527916 RNASE9P60153 205 aaKnown RBP10.76□□□□□ -0.69
CPSF1-203ENST00000527916 HNRNPKP61978 463 aaKnown RBP eCLIP10.76□□□□□ -0.69
CPSF1-203ENST00000527916 NOMO3P69849 1222 aa10.76□□□□□ -0.69
CPSF1-203ENST00000527916 CDR2Q01850 454 aa10.76□□□□□ -0.69
CPSF1-203ENST00000527916 DEUP1Q05D60 604 aa10.76□□□□□ -0.69
CPSF1-203ENST00000527916 CCDC15Q0P6D6 951 aa10.76□□□□□ -0.69
CPSF1-203ENST00000527916 ZNF177Q13360 481 aaPredicted RBP10.76□□□□□ -0.69
CPSF1-203ENST00000527916 OTUD1Q5VV17 481 aaPredicted RBP10.76□□□□□ -0.69
CPSF1-203ENST00000527916 ZCCHC8Q6NZY4 707 aaKnown RBP10.76□□□□□ -0.69
CPSF1-203ENST00000527916 NEK5Q6P3R8 708 aa10.76□□□□□ -0.69
CPSF1-203ENST00000527916 CLEC14AQ86T13 490 aa10.76□□□□□ -0.69
CPSF1-203ENST00000527916 SETD3Q86TU7 594 aaPredicted RBP10.76□□□□□ -0.69
CPSF1-203ENST00000527916 DCP2Q8IU60 420 aaKnown RBP10.76□□□□□ -0.69
CPSF1-203ENST00000527916 TMEM145Q8NBT3 493 aa10.76□□□□□ -0.69
CPSF1-203ENST00000527916 ANKRD20A12PQ8NF67 263 aa10.76□□□□□ -0.69
CPSF1-203ENST00000527916 FAM174AQ8TBP5 190 aa10.76□□□□□ -0.69
CPSF1-203ENST00000527916 FRS2Q8WU20 508 aa10.76□□□□□ -0.69
CPSF1-203ENST00000527916 OR8D1Q8WZ84 308 aa10.76□□□□□ -0.69
CPSF1-203ENST00000527916 SGF29Q96ES7 293 aa10.76□□□□□ -0.69
CPSF1-203ENST00000527916 RPL10LQ96L21 214 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms