RNA–Protein interactions for RNA: ENST00000527821.2

SSH3-205, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 3

Gene SSH3, Length 656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-205ENST00000527821 NEUROG2Q9H2A3 272 aa16.82■□□□□ 0.28
SSH3-205ENST00000527821 ARRDC1-AS1Q9H2J1 176 aa16.82■□□□□ 0.28
SSH3-205ENST00000527821 ZDHHC6Q9H6R6 413 aa16.82■□□□□ 0.28
SSH3-205ENST00000527821 HECAQ9UBI9 543 aaPredicted RBP16.82■□□□□ 0.28
SSH3-205ENST00000527821 TRIM10Q9UDY6 481 aa16.82■□□□□ 0.28
SSH3-205ENST00000527821 SERGEFQ9UGK8 458 aa16.82■□□□□ 0.28
SSH3-205ENST00000527821 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.82■□□□□ 0.28
SSH3-205ENST00000527821 ADGRG1Q9Y653 693 aa16.82■□□□□ 0.28
SSH3-205ENST00000527821 ZNF487B1APH4 448 aa16.81■□□□□ 0.28
SSH3-205ENST00000527821 KPNA3O00505 521 aaPredicted RBP16.81■□□□□ 0.28
SSH3-205ENST00000527821 MFSD11O43934 449 aa16.81■□□□□ 0.28
SSH3-205ENST00000527821 PALMO75781 387 aa16.81■□□□□ 0.28
SSH3-205ENST00000527821 IGSF6O95976 241 aa16.81■□□□□ 0.28
SSH3-205ENST00000527821 GSRP00390 522 aa16.81■□□□□ 0.28
SSH3-205ENST00000527821 ACSL1P33121 698 aa16.81■□□□□ 0.28
SSH3-205ENST00000527821 PTGER3P43115 390 aa16.81■□□□□ 0.28
SSH3-205ENST00000527821 METAP1P53582 386 aa16.81■□□□□ 0.28
SSH3-205ENST00000527821 ZNF33AQ06730 810 aa16.81■□□□□ 0.28
SSH3-205ENST00000527821 PAFAH1B3Q15102 231 aaKnown RBP16.81■□□□□ 0.28
SSH3-205ENST00000527821 CYTH1Q15438 398 aa16.81■□□□□ 0.28
SSH3-205ENST00000527821 ATXN7L2Q5T6C5 722 aaPredicted RBP16.81■□□□□ 0.28
SSH3-205ENST00000527821 LYSMD4Q5XG99 296 aa16.81■□□□□ 0.28
SSH3-205ENST00000527821 CYP2U1Q7Z449 544 aa16.81■□□□□ 0.28
SSH3-205ENST00000527821 VSIG1Q86XK7 387 aa16.81■□□□□ 0.28
SSH3-205ENST00000527821 ATPAF2Q8N5M1 289 aa16.81■□□□□ 0.28
SSH3-205ENST00000527821 TMIEQ8NEW7 156 aa16.81■□□□□ 0.28
SSH3-205ENST00000527821 KIAA1524Q8TCG1 905 aa16.81■□□□□ 0.28
SSH3-205ENST00000527821 HSPA12BQ96MM6 686 aa16.81■□□□□ 0.28
SSH3-205ENST00000527821 GDAP1L1Q96MZ0 367 aa16.81■□□□□ 0.28
SSH3-205ENST00000527821 SGK2Q9HBY8 427 aa16.81■□□□□ 0.28
SSH3-205ENST00000527821 DYRK4Q9NR20 520 aa16.81■□□□□ 0.28
SSH3-205ENST00000527821 FZD4Q9ULV1 537 aa16.81■□□□□ 0.28
SSH3-205ENST00000527821 FAM47DPA6NHR8 397 aa16.8■□□□□ 0.28
SSH3-205ENST00000527821 C3orf70A6NLC5 250 aaPredicted RBP16.8■□□□□ 0.28
SSH3-205ENST00000527821 PLK4O00444 970 aa16.8■□□□□ 0.28
SSH3-205ENST00000527821 KRIT1O00522 736 aa16.8■□□□□ 0.28
SSH3-205ENST00000527821 LEFTY1O75610 366 aa16.8■□□□□ 0.28
SSH3-205ENST00000527821 POP4O95707 220 aaKnown RBP16.8■□□□□ 0.28
SSH3-205ENST00000527821 SEMA4FO95754 770 aa16.8■□□□□ 0.28
SSH3-205ENST00000527821 DRD3P35462 400 aa16.8■□□□□ 0.28
SSH3-205ENST00000527821 CCZ1BP86790 482 aa16.8■□□□□ 0.28
SSH3-205ENST00000527821 CCZ1P86791 482 aaPredicted RBP16.8■□□□□ 0.28
SSH3-205ENST00000527821 RAD51Q06609 339 aa16.8■□□□□ 0.28
SSH3-205ENST00000527821 SPEM2Q0P670 501 aa16.8■□□□□ 0.28
SSH3-205ENST00000527821 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.8■□□□□ 0.28
SSH3-205ENST00000527821 RFX6Q8HWS3 928 aa16.8■□□□□ 0.28
SSH3-205ENST00000527821 SLC41A1Q8IVJ1 513 aa16.8■□□□□ 0.28
SSH3-205ENST00000527821 PQLC3Q8N755 202 aa16.8■□□□□ 0.28
SSH3-205ENST00000527821 NSMCE1Q8WV22 266 aa16.8■□□□□ 0.28
SSH3-205ENST00000527821 FOXJ1Q92949 421 aa16.8■□□□□ 0.28
SSH3-205ENST00000527821 EXOC2Q96KP1 924 aa16.8■□□□□ 0.28
SSH3-205ENST00000527821 CINPQ9BW66 212 aaPredicted RBP16.8■□□□□ 0.28
SSH3-205ENST00000527821 TSGA10Q9BZW7 698 aa16.8■□□□□ 0.28
SSH3-205ENST00000527821 LHX3Q9UBR4 397 aa16.8■□□□□ 0.28
SSH3-205ENST00000527821 PCDHGA5Q9Y5G8 931 aa16.8■□□□□ 0.28
SSH3-205ENST00000527821 WASF2Q9Y6W5 498 aa16.8■□□□□ 0.28
SSH3-205ENST00000527821 BCLAF3A2AJT9 711 aaKnown RBP16.79■□□□□ 0.28
SSH3-205ENST00000527821 GRID2IPA4D2P6 1211 aa16.79■□□□□ 0.28
SSH3-205ENST00000527821 MEI4A8MW99 385 aa16.79■□□□□ 0.28
SSH3-205ENST00000527821 APOL1O14791 398 aa16.79■□□□□ 0.28
SSH3-205ENST00000527821 KRT86O43790 486 aa16.79■□□□□ 0.28
SSH3-205ENST00000527821 MAFKO60675 156 aa16.79■□□□□ 0.28
SSH3-205ENST00000527821 ZRANB2O95218 330 aaKnown RBP eCLIP16.79■□□□□ 0.28
SSH3-205ENST00000527821 MAP3K6O95382 1288 aa16.79■□□□□ 0.28
SSH3-205ENST00000527821 GKP32189 559 aa16.79■□□□□ 0.28
SSH3-205ENST00000527821 MPLP40238 635 aa16.79■□□□□ 0.28
SSH3-205ENST00000527821 CCDC15Q0P6D6 951 aa16.79■□□□□ 0.28
SSH3-205ENST00000527821 RFTN1Q14699 578 aaPredicted RBP16.79■□□□□ 0.28
SSH3-205ENST00000527821 LBRQ14739 615 aaKnown RBP16.79■□□□□ 0.28
SSH3-205ENST00000527821 CCDC6Q16204 474 aa16.79■□□□□ 0.28
SSH3-205ENST00000527821 MYLK3Q32MK0 819 aa16.79■□□□□ 0.28
SSH3-205ENST00000527821 SYCP2LQ5T4T6 812 aa16.79■□□□□ 0.28
SSH3-205ENST00000527821 TMCO4Q5TGY1 634 aa16.79■□□□□ 0.28
SSH3-205ENST00000527821 MFSD7Q6UXD7 560 aa16.79■□□□□ 0.28
SSH3-205ENST00000527821 LRRC49Q8IUZ0 686 aa16.79■□□□□ 0.28
SSH3-205ENST00000527821 CCDC50Q8IVM0 306 aa16.79■□□□□ 0.28
SSH3-205ENST00000527821 KATNAL2Q8IYT4 538 aa16.79■□□□□ 0.28
SSH3-205ENST00000527821 RGL4Q8IZJ4 473 aa16.79■□□□□ 0.28
SSH3-205ENST00000527821 CADM4Q8NFZ8 388 aa16.79■□□□□ 0.28
SSH3-205ENST00000527821 OR14C36Q8NHC7 312 aa16.79■□□□□ 0.28
SSH3-205ENST00000527821 PIGKQ92643 395 aa16.79■□□□□ 0.28
SSH3-205ENST00000527821 KRT35Q92764 455 aa16.79■□□□□ 0.28
SSH3-205ENST00000527821 ZNF419Q96HQ0 510 aaPredicted RBP16.79■□□□□ 0.28
SSH3-205ENST00000527821 PPP1R16AQ96I34 528 aa16.79■□□□□ 0.28
SSH3-205ENST00000527821 ZNF599Q96NL3 588 aa16.79■□□□□ 0.28
SSH3-205ENST00000527821 EVLQ9UI08 416 aaPredicted RBP16.79■□□□□ 0.28
SSH3-205ENST00000527821 RALGAPA1Q6GYQ0 2036 aa16.79■□□□□ 0.28
SSH3-205ENST00000527821 SHROOM3Q8TF72 1996 aa16.78■□□□□ 0.28
SSH3-205ENST00000527821 SDK1Q7Z5N4 2213 aa16.78■□□□□ 0.28
SSH3-205ENST00000527821 ATXN2Q99700 1313 aaKnown RBP16.78■□□□□ 0.28
SSH3-205ENST00000527821 TNRC6BQ9UPQ9 1833 aaKnown RBP16.78■□□□□ 0.28
SSH3-205ENST00000527821 LRRC72A6NJI9 287 aa16.78■□□□□ 0.28
SSH3-205ENST00000527821 PTMAP06454 111 aaKnown RBP16.78■□□□□ 0.28
SSH3-205ENST00000527821 CCDC175P0C221 793 aa16.78■□□□□ 0.28
SSH3-205ENST00000527821 ZFXP17010 805 aaPredicted RBP16.78■□□□□ 0.28
SSH3-205ENST00000527821 ITPKAP23677 461 aa16.78■□□□□ 0.28
SSH3-205ENST00000527821 CTNNA1P35221 906 aaKnown RBP16.78■□□□□ 0.28
SSH3-205ENST00000527821 GARSP41250 739 aaKnown RBP16.78■□□□□ 0.28
SSH3-205ENST00000527821 MARCKSL1P49006 195 aa16.78■□□□□ 0.28
SSH3-205ENST00000527821 DYNLT1P63172 113 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms