RNA–Protein interactions for RNA: ENST00000527599.1

CTNND1-217, Transcript of catenin delta 1, humanhuman

TSL 2

Gene CTNND1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-217ENST00000527599 GLUD2P49448 558 aa7.76□□□□□ -1.17
CTNND1-217ENST00000527599 RBM5P52756 815 aaKnown RBP eCLIP7.76□□□□□ -1.17
CTNND1-217ENST00000527599 CDH12P55289 794 aa7.76□□□□□ -1.17
CTNND1-217ENST00000527599 THOC5Q13769 683 aaKnown RBP7.76□□□□□ -1.17
CTNND1-217ENST00000527599 TMEM268Q5VZI3 342 aa7.76□□□□□ -1.17
CTNND1-217ENST00000527599 LINS1Q8NG48 757 aa7.76□□□□□ -1.17
CTNND1-217ENST00000527599 TWSG1Q9GZX9 223 aa7.76□□□□□ -1.17
CTNND1-217ENST00000527599 TOPBP1Q92547 1522 aa7.76□□□□□ -1.17
CTNND1-217ENST00000527599 VWA5AO00534 786 aa7.75□□□□□ -1.17
CTNND1-217ENST00000527599 ACOT8O14734 319 aa7.75□□□□□ -1.17
CTNND1-217ENST00000527599 ZNF12P17014 697 aa7.75□□□□□ -1.17
CTNND1-217ENST00000527599 ITGB8P26012 769 aa7.75□□□□□ -1.17
CTNND1-217ENST00000527599 DPP6P42658 865 aa7.75□□□□□ -1.17
CTNND1-217ENST00000527599 TRAF3Q13114 568 aa7.75□□□□□ -1.17
CTNND1-217ENST00000527599 SHBQ15464 509 aa7.75□□□□□ -1.17
CTNND1-217ENST00000527599 CLIP4Q8N3C7 705 aa7.75□□□□□ -1.17
CTNND1-217ENST00000527599 SLC35F5Q8WV83 523 aa7.75□□□□□ -1.17
CTNND1-217ENST00000527599 GOLGA1Q92805 767 aa7.75□□□□□ -1.17
CTNND1-217ENST00000527599 TEFMQ96QE5 360 aaKnown RBP7.75□□□□□ -1.17
CTNND1-217ENST00000527599 CXorf56Q9H5V9 222 aa7.75□□□□□ -1.17
CTNND1-217ENST00000527599 NLKQ9UBE8 527 aa7.75□□□□□ -1.17
CTNND1-217ENST00000527599 CCNT1O60563 726 aaKnown RBP7.74□□□□□ -1.17
CTNND1-217ENST00000527599 ENO3P13929 434 aaPredicted RBP7.74□□□□□ -1.17
CTNND1-217ENST00000527599 PTPN9P43378 593 aa7.74□□□□□ -1.17
CTNND1-217ENST00000527599 AP5B1Q2VPB7 878 aa7.74□□□□□ -1.17
CTNND1-217ENST00000527599 TDRD12Q587J7 1177 aaKnown RBP7.74□□□□□ -1.17
CTNND1-217ENST00000527599 TEX45Q8NA69 505 aa7.74□□□□□ -1.17
CTNND1-217ENST00000527599 LMLNQ96KR4 655 aa7.74□□□□□ -1.17
CTNND1-217ENST00000527599 CUX2O14529 1486 aa7.74□□□□□ -1.17
CTNND1-217ENST00000527599 METTL18O95568 372 aa7.73□□□□□ -1.17
CTNND1-217ENST00000527599 CHKAP35790 457 aa7.73□□□□□ -1.17
CTNND1-217ENST00000527599 ARHGAP8P85298 464 aa7.73□□□□□ -1.17
CTNND1-217ENST00000527599 BYSLQ13895 437 aaKnown RBP7.73□□□□□ -1.17
CTNND1-217ENST00000527599 RUNDC3AQ59EK9 446 aa7.73□□□□□ -1.17
CTNND1-217ENST00000527599 ATG9BQ674R7 924 aa7.73□□□□□ -1.17
CTNND1-217ENST00000527599 C8orf82Q6P1X6 216 aaPredicted RBP7.73□□□□□ -1.17
CTNND1-217ENST00000527599 TMEM163Q8TC26 289 aa7.73□□□□□ -1.17
CTNND1-217ENST00000527599 LHPPQ9H008 270 aa7.73□□□□□ -1.17
CTNND1-217ENST00000527599 CHODLQ9H9P2 273 aa7.73□□□□□ -1.17
CTNND1-217ENST00000527599 POLA1P09884 1462 aaPredicted RBP7.73□□□□□ -1.17
CTNND1-217ENST00000527599 URB2Q14146 1524 aaKnown RBP7.73□□□□□ -1.17
CTNND1-217ENST00000527599 SEPT4O43236 478 aa7.72□□□□□ -1.17
CTNND1-217ENST00000527599 RFC1P35251 1148 aaPredicted RBP7.72□□□□□ -1.17
CTNND1-217ENST00000527599 DSC1Q08554 894 aa7.72□□□□□ -1.17
CTNND1-217ENST00000527599 IL13RA2Q14627 380 aa7.72□□□□□ -1.17
CTNND1-217ENST00000527599 POSTNQ15063 836 aa7.72□□□□□ -1.17
CTNND1-217ENST00000527599 FAM83BQ5T0W9 1011 aa7.72□□□□□ -1.17
CTNND1-217ENST00000527599 PRSS57Q6UWY2 283 aa7.72□□□□□ -1.17
CTNND1-217ENST00000527599 NOL8Q76FK4 1167 aaKnown RBP7.72□□□□□ -1.17
CTNND1-217ENST00000527599 SETD9Q8NE22 299 aa7.72□□□□□ -1.17
CTNND1-217ENST00000527599 RILPL2Q969X0 211 aa7.72□□□□□ -1.17
CTNND1-217ENST00000527599 CTDSP1Q9GZU7 261 aa7.72□□□□□ -1.17
CTNND1-217ENST00000527599 SAYSD1Q9NPB0 183 aa7.72□□□□□ -1.17
CTNND1-217ENST00000527599 GRHL1Q9NZI5 618 aa7.72□□□□□ -1.17
CTNND1-217ENST00000527599 ABCA10Q8WWZ4 1543 aa7.72□□□□□ -1.17
CTNND1-217ENST00000527599 CLIP1P30622 1438 aa7.71□□□□□ -1.17
CTNND1-217ENST00000527599 PDS5BQ9NTI5 1447 aa7.71□□□□□ -1.17
CTNND1-217ENST00000527599 IFITM10A6NMD0 228 aa7.71□□□□□ -1.18
CTNND1-217ENST00000527599 PRSS2P07478 247 aa7.71□□□□□ -1.18
CTNND1-217ENST00000527599 ADD2P35612 726 aa7.71□□□□□ -1.18
CTNND1-217ENST00000527599 GJC1P36383 396 aa7.71□□□□□ -1.18
CTNND1-217ENST00000527599 NUDT6P53370 316 aa7.71□□□□□ -1.18
CTNND1-217ENST00000527599 KIF5AQ12840 1032 aa7.71□□□□□ -1.18
CTNND1-217ENST00000527599 SH2D4BQ5SQS7 431 aa7.71□□□□□ -1.18
CTNND1-217ENST00000527599 ARMC9Q7Z3E5 817 aa7.71□□□□□ -1.18
CTNND1-217ENST00000527599 MYCT1Q8N699 235 aa7.71□□□□□ -1.18
CTNND1-217ENST00000527599 GFM1Q96RP9 751 aaKnown RBP7.71□□□□□ -1.18
CTNND1-217ENST00000527599 TM6SF1Q9BZW5 370 aa7.71□□□□□ -1.18
CTNND1-217ENST00000527599 IL36RNQ9UBH0 155 aa7.71□□□□□ -1.18
CTNND1-217ENST00000527599 CBX6O95503 412 aa7.7□□□□□ -1.18
CTNND1-217ENST00000527599 NAGAP17050 411 aa7.7□□□□□ -1.18
CTNND1-217ENST00000527599 SKIV2L2P42285 1042 aaKnown RBP7.7□□□□□ -1.18
CTNND1-217ENST00000527599 AMTP48728 403 aa7.7□□□□□ -1.18
CTNND1-217ENST00000527599 BNC1Q01954 994 aa7.7□□□□□ -1.18
CTNND1-217ENST00000527599 MYBPC2Q14324 1141 aa7.7□□□□□ -1.18
CTNND1-217ENST00000527599 RBFAQ8N0V3 343 aa7.7□□□□□ -1.18
CTNND1-217ENST00000527599 MIGA1Q8NAN2 632 aa7.7□□□□□ -1.18
CTNND1-217ENST00000527599 OR4N2Q8NGD1 307 aa7.7□□□□□ -1.18
CTNND1-217ENST00000527599 GPT2Q8TD30 523 aa7.7□□□□□ -1.18
CTNND1-217ENST00000527599 THAP4Q8WY91 577 aa7.7□□□□□ -1.18
CTNND1-217ENST00000527599 RUBCNQ92622 972 aa7.7□□□□□ -1.18
CTNND1-217ENST00000527599 TMEM18Q96B42 140 aa7.7□□□□□ -1.18
CTNND1-217ENST00000527599 SDCCAG3Q96C92 435 aa7.7□□□□□ -1.18
CTNND1-217ENST00000527599 MSTO1Q9BUK6 570 aa7.7□□□□□ -1.18
CTNND1-217ENST00000527599 DHDHQ9UQ10 334 aa7.7□□□□□ -1.18
CTNND1-217ENST00000527599 RIPOR2Q9Y4F9 1068 aa7.7□□□□□ -1.18
CTNND1-217ENST00000527599 CUL7Q14999 1698 aa7.7□□□□□ -1.18
CTNND1-217ENST00000527599 RAD54L2Q9Y4B4 1467 aa7.69□□□□□ -1.18
CTNND1-217ENST00000527599 OR6C68A6NDL8 312 aa7.69□□□□□ -1.18
CTNND1-217ENST00000527599 B9A039 149 aa7.69□□□□□ -1.18
CTNND1-217ENST00000527599 CD72P21854 359 aa7.69□□□□□ -1.18
CTNND1-217ENST00000527599 MCM2P49736 904 aa7.69□□□□□ -1.18
CTNND1-217ENST00000527599 KRT72Q14CN4 511 aa7.69□□□□□ -1.18
CTNND1-217ENST00000527599 RPE65Q16518 533 aa7.69□□□□□ -1.18
CTNND1-217ENST00000527599 FBXO43Q4G163 708 aa7.69□□□□□ -1.18
CTNND1-217ENST00000527599 NAPEPLDQ6IQ20 393 aa7.69□□□□□ -1.18
CTNND1-217ENST00000527599 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.69□□□□□ -1.182e-6■■■■□ 21.1
CTNND1-217ENST00000527599 GALNT15Q8N3T1 639 aa7.69□□□□□ -1.18
CTNND1-217ENST00000527599 ATOH1Q92858 354 aaPredicted RBP7.69□□□□□ -1.18
CTNND1-217ENST00000527599 LTV1Q96GA3 475 aaPredicted RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms