RNA–Protein interactions for RNA: ENST00000527013.5

CHEK1-209, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-209ENST00000527013 RETSATQ6NUM9 610 aa16.43■□□□□ 0.22
CHEK1-209ENST00000527013 IGF2-ASQ6U949 168 aa16.43■□□□□ 0.22
CHEK1-209ENST00000527013 KYAT3Q6YP21 454 aaKnown RBP16.43■□□□□ 0.22
CHEK1-209ENST00000527013 TMC6Q7Z403 805 aa16.43■□□□□ 0.22
CHEK1-209ENST00000527013 BNIPLQ7Z465 357 aa16.43■□□□□ 0.22
CHEK1-209ENST00000527013 FAM71AQ8IYT1 594 aa16.43■□□□□ 0.22
CHEK1-209ENST00000527013 ZNF843Q8N446 348 aa16.43■□□□□ 0.22
CHEK1-209ENST00000527013 PCDH20Q8N6Y1 951 aaKnown RBP16.43■□□□□ 0.22
CHEK1-209ENST00000527013 GRIN3AQ8TCU5 1115 aa16.43■□□□□ 0.22
CHEK1-209ENST00000527013 FEM1CQ96JP0 617 aa16.43■□□□□ 0.22
CHEK1-209ENST00000527013 HAPLN3Q96S86 360 aa16.43■□□□□ 0.22
CHEK1-209ENST00000527013 TNKS2Q9H2K2 1166 aa16.43■□□□□ 0.22
CHEK1-209ENST00000527013 MPP6Q9NZW5 540 aa16.43■□□□□ 0.22
CHEK1-209ENST00000527013 DNAJC12Q9UKB3 198 aa16.43■□□□□ 0.22
CHEK1-209ENST00000527013 FADS3Q9Y5Q0 445 aa16.43■□□□□ 0.22
CHEK1-209ENST00000527013 CSNK1G3Q9Y6M4 447 aa16.43■□□□□ 0.22
CHEK1-209ENST00000527013 POM121BA6NF01 834 aa16.42■□□□□ 0.22
CHEK1-209ENST00000527013 ERVH48-1M5A8F1 160 aa16.42■□□□□ 0.22
CHEK1-209ENST00000527013 CSF2P04141 144 aa16.42■□□□□ 0.22
CHEK1-209ENST00000527013 MPOP05164 745 aa16.42■□□□□ 0.22
CHEK1-209ENST00000527013 NME1P15531 152 aaKnown RBP16.42■□□□□ 0.22
CHEK1-209ENST00000527013 SULT1E1P49888 294 aa16.42■□□□□ 0.22
CHEK1-209ENST00000527013 SERPINH1P50454 418 aaKnown RBP16.42■□□□□ 0.22
CHEK1-209ENST00000527013 UCNP55089 124 aa16.42■□□□□ 0.22
CHEK1-209ENST00000527013 ZCCHC8Q6NZY4 707 aaKnown RBP16.42■□□□□ 0.22
CHEK1-209ENST00000527013 ARCQ7LC44 396 aa16.42■□□□□ 0.22
CHEK1-209ENST00000527013 TFAP2DQ7Z6R9 452 aa16.42■□□□□ 0.22
CHEK1-209ENST00000527013 PLPP6Q8IY26 295 aa16.42■□□□□ 0.22
CHEK1-209ENST00000527013 TMEM35BQ8NCS4 154 aa16.42■□□□□ 0.22
CHEK1-209ENST00000527013 OR7D4Q8NG98 312 aa16.42■□□□□ 0.22
CHEK1-209ENST00000527013 ASB12Q8WXK4 309 aa16.42■□□□□ 0.22
CHEK1-209ENST00000527013 GRAMD1AQ96CP6 724 aa16.42■□□□□ 0.22
CHEK1-209ENST00000527013 WBP1Q96G27 269 aa16.42■□□□□ 0.22
CHEK1-209ENST00000527013 LENG8Q96PV6 779 aaPredicted RBP16.42■□□□□ 0.22
CHEK1-209ENST00000527013 TBCBQ99426 244 aa16.42■□□□□ 0.22
CHEK1-209ENST00000527013 LGMNQ99538 433 aa16.42■□□□□ 0.22
CHEK1-209ENST00000527013 HEPHQ9BQS7 1158 aa16.42■□□□□ 0.22
CHEK1-209ENST00000527013 CAAP1Q9H8G2 361 aa16.42■□□□□ 0.22
CHEK1-209ENST00000527013 POLR1BQ9H9Y6 1135 aa16.42■□□□□ 0.22
CHEK1-209ENST00000527013 PLCB1Q9NQ66 1216 aa16.42■□□□□ 0.22
CHEK1-209ENST00000527013 DNAJC28Q9NX36 388 aa16.42■□□□□ 0.22
CHEK1-209ENST00000527013 NCKIPSDQ9NZQ3 722 aa16.42■□□□□ 0.22
CHEK1-209ENST00000527013 SSUH2Q9Y2M2 353 aa16.42■□□□□ 0.22
CHEK1-209ENST00000527013 SNX10Q9Y5X0 201 aa16.42■□□□□ 0.22
CHEK1-209ENST00000527013 ATMQ13315 3056 aa16.42■□□□□ 0.22
CHEK1-209ENST00000527013 COL27A1Q8IZC6 1860 aaPredicted RBP16.42■□□□□ 0.22
CHEK1-209ENST00000527013 CAPN8A6NHC0 703 aa16.41■□□□□ 0.22
CHEK1-209ENST00000527013 USP12O75317 370 aa16.41■□□□□ 0.22
CHEK1-209ENST00000527013 CSO75390 466 aaKnown RBP16.41■□□□□ 0.22
CHEK1-209ENST00000527013 PAK4O96013 591 aaPredicted RBP16.41■□□□□ 0.22
CHEK1-209ENST00000527013 RABIFP47224 123 aa16.41■□□□□ 0.22
CHEK1-209ENST00000527013 RNASE9P60153 205 aaKnown RBP16.41■□□□□ 0.22
CHEK1-209ENST00000527013 CXADRP78310 365 aa16.41■□□□□ 0.22
CHEK1-209ENST00000527013 GABREP78334 506 aa16.41■□□□□ 0.22
CHEK1-209ENST00000527013 CARD16Q5EG05 197 aa16.41■□□□□ 0.22
CHEK1-209ENST00000527013 DPY19L2P1Q6NXN4 242 aa16.41■□□□□ 0.22
CHEK1-209ENST00000527013 PTAR1Q7Z6K3 402 aaPredicted RBP16.41■□□□□ 0.22
CHEK1-209ENST00000527013 PARGQ86W56 976 aa16.41■□□□□ 0.22
CHEK1-209ENST00000527013 ZNF548Q8NEK5 533 aaPredicted RBP16.41■□□□□ 0.22
CHEK1-209ENST00000527013 SNRNP27Q8WVK2 155 aaKnown RBP16.41■□□□□ 0.22
CHEK1-209ENST00000527013 ISG20Q96AZ6 181 aaKnown RBP16.41■□□□□ 0.22
CHEK1-209ENST00000527013 C18orf8Q96DM3 657 aa16.41■□□□□ 0.22
CHEK1-209ENST00000527013 KLF6Q99612 283 aaPredicted RBP16.41■□□□□ 0.22
CHEK1-209ENST00000527013 C1QTNF2Q9BXJ5 285 aa16.41■□□□□ 0.22
CHEK1-209ENST00000527013 ABCG4Q9H172 646 aa16.41■□□□□ 0.22
CHEK1-209ENST00000527013 ASCL3Q9NQ33 180 aa16.41■□□□□ 0.22
CHEK1-209ENST00000527013 TMPRSS4Q9NRS4 437 aa16.41■□□□□ 0.22
CHEK1-209ENST00000527013 KIAA1468Q9P260 1216 aa16.41■□□□□ 0.22
CHEK1-209ENST00000527013 PPARGC1AQ9UBK2 798 aaKnown RBP16.41■□□□□ 0.22
CHEK1-209ENST00000527013 CFAP46Q8IYW2 2715 aa16.4■□□□□ 0.22
CHEK1-209ENST00000527013 H3BM21 787 aa16.4■□□□□ 0.22
CHEK1-209ENST00000527013 TPP1O14773 563 aa16.4■□□□□ 0.22
CHEK1-209ENST00000527013 RAD51BO15315 384 aa16.4■□□□□ 0.22
CHEK1-209ENST00000527013 CD160O95971 181 aa16.4■□□□□ 0.22
CHEK1-209ENST00000527013 FLT3P36888 993 aa16.4■□□□□ 0.22
CHEK1-209ENST00000527013 CCNHP51946 323 aaPredicted RBP16.4■□□□□ 0.22
CHEK1-209ENST00000527013 TMPRSS3P57727 454 aa16.4■□□□□ 0.22
CHEK1-209ENST00000527013 ARF5P84085 180 aa16.4■□□□□ 0.22
CHEK1-209ENST00000527013 RHDQ02161 417 aa16.4■□□□□ 0.22
CHEK1-209ENST00000527013 GNA12Q03113 381 aa16.4■□□□□ 0.22
CHEK1-209ENST00000527013 ISXQ2M1V0 245 aa16.4■□□□□ 0.22
CHEK1-209ENST00000527013 ZNF542PQ5EBM4 170 aa16.4■□□□□ 0.22
CHEK1-209ENST00000527013 BROXQ5VW32 411 aa16.4■□□□□ 0.22
CHEK1-209ENST00000527013 XYLT1Q86Y38 959 aa16.4■□□□□ 0.22
CHEK1-209ENST00000527013 CREBRFQ8IUR6 639 aa16.4■□□□□ 0.22
CHEK1-209ENST00000527013 RAB7BQ96AH8 199 aa16.4■□□□□ 0.22
CHEK1-209ENST00000527013 DPH1Q9BZG8 443 aa16.4■□□□□ 0.22
CHEK1-209ENST00000527013 ZYG11BQ9C0D3 744 aa16.4■□□□□ 0.22
CHEK1-209ENST00000527013 RETREG1Q9H6L5 497 aa16.4■□□□□ 0.22
CHEK1-209ENST00000527013 ATP13A1Q9HD20 1204 aa16.4■□□□□ 0.22
CHEK1-209ENST00000527013 SALL4Q9UJQ4 1053 aa16.4■□□□□ 0.22
CHEK1-209ENST00000527013 TMEM59LQ9UK28 342 aa16.4■□□□□ 0.22
CHEK1-209ENST00000527013 CHD5Q8TDI0 1954 aa16.4■□□□□ 0.22
CHEK1-209ENST00000527013 EME2A4GXA9 379 aaPredicted RBP16.39■□□□□ 0.21
CHEK1-209ENST00000527013 TSPAN6O43657 245 aa16.39■□□□□ 0.21
CHEK1-209ENST00000527013 SRGAP2O75044 1071 aa16.39■□□□□ 0.21
CHEK1-209ENST00000527013 GADD45BO75293 160 aaPredicted RBP16.39■□□□□ 0.21
CHEK1-209ENST00000527013 NEBLO76041 1014 aa16.39■□□□□ 0.21
CHEK1-209ENST00000527013 ENDOD1O94919 500 aa16.39■□□□□ 0.21
CHEK1-209ENST00000527013 PNMA6AP0CW24 399 aaPredicted RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms