RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 GSRP00390 522 aa16.79■□□□□ 0.28
CAPN1-205ENST00000526954 JCHAINP01591 159 aa16.79■□□□□ 0.28
CAPN1-205ENST00000526954 HLA-EP13747 358 aa16.79■□□□□ 0.28
CAPN1-205ENST00000526954 PTPN3P26045 913 aa16.79■□□□□ 0.28
CAPN1-205ENST00000526954 CSNK1DP48730 415 aa16.79■□□□□ 0.28
CAPN1-205ENST00000526954 WASHC5Q12768 1159 aa16.79■□□□□ 0.28
CAPN1-205ENST00000526954 CAMK2GQ13555 558 aaPredicted RBP16.79■□□□□ 0.28
CAPN1-205ENST00000526954 TEX44Q53QW1 395 aa16.79■□□□□ 0.28
CAPN1-205ENST00000526954 C9orf64Q5T6V5 341 aa16.79■□□□□ 0.28
CAPN1-205ENST00000526954 PKN3Q6P5Z2 889 aa16.79■□□□□ 0.28
CAPN1-205ENST00000526954 MAMSTRQ6ZN01 415 aa16.79■□□□□ 0.28
CAPN1-205ENST00000526954 SYT13Q7L8C5 426 aa16.79■□□□□ 0.28
CAPN1-205ENST00000526954 ZNF572Q7Z3I7 529 aaPredicted RBP16.79■□□□□ 0.28
CAPN1-205ENST00000526954 PGBD5Q8N414 524 aa16.79■□□□□ 0.28
CAPN1-205ENST00000526954 MAGOHBQ96A72 148 aaKnown RBP16.79■□□□□ 0.28
CAPN1-205ENST00000526954 RTP4Q96DX8 246 aa16.79■□□□□ 0.28
CAPN1-205ENST00000526954 ZNF419Q96HQ0 510 aaPredicted RBP16.79■□□□□ 0.28
CAPN1-205ENST00000526954 MGME1Q9BQP7 344 aa16.79■□□□□ 0.28
CAPN1-205ENST00000526954 EPHX3Q9H6B9 360 aa16.79■□□□□ 0.28
CAPN1-205ENST00000526954 C10orf88Q9H8K7 445 aa16.79■□□□□ 0.28
CAPN1-205ENST00000526954 RBM22Q9NW64 420 aaKnown RBP eCLIP16.79■□□□□ 0.28
CAPN1-205ENST00000526954 LHX3Q9UBR4 397 aa16.79■□□□□ 0.28
CAPN1-205ENST00000526954 ATP8A1Q9Y2Q0 1164 aa16.79■□□□□ 0.28
CAPN1-205ENST00000526954 MRFAP1Q9Y605 127 aa16.79■□□□□ 0.28
CAPN1-205ENST00000526954 MUSKO15146 869 aa16.78■□□□□ 0.28
CAPN1-205ENST00000526954 KCNN4O15554 427 aa16.78■□□□□ 0.28
CAPN1-205ENST00000526954 PI15O43692 258 aa16.78■□□□□ 0.28
CAPN1-205ENST00000526954 PHF2O75151 1096 aa16.78■□□□□ 0.28
CAPN1-205ENST00000526954 EPHX1P07099 455 aa16.78■□□□□ 0.28
CAPN1-205ENST00000526954 DCNP07585 359 aaKnown RBP16.78■□□□□ 0.28
CAPN1-205ENST00000526954 WASP42768 502 aa16.78■□□□□ 0.28
CAPN1-205ENST00000526954 RHOAP61586 193 aa16.78■□□□□ 0.28
CAPN1-205ENST00000526954 SNRPD1P62314 119 aaKnown RBP16.78■□□□□ 0.28
CAPN1-205ENST00000526954 ZBTB17Q13105 803 aa16.78■□□□□ 0.28
CAPN1-205ENST00000526954 SNX1Q13596 522 aa16.78■□□□□ 0.28
CAPN1-205ENST00000526954 ZNF235Q14590 738 aa16.78■□□□□ 0.28
CAPN1-205ENST00000526954 WHAMMP3Q1A5X7 153 aa16.78■□□□□ 0.28
CAPN1-205ENST00000526954 CARD16Q5EG05 197 aa16.78■□□□□ 0.28
CAPN1-205ENST00000526954 ALG1LQ6GMV1 187 aa16.78■□□□□ 0.28
CAPN1-205ENST00000526954 Q6ZVU0 165 aa16.78■□□□□ 0.28
CAPN1-205ENST00000526954 SPEM1Q8N4L4 309 aa16.78■□□□□ 0.28
CAPN1-205ENST00000526954 CNTD1Q8N815 330 aa16.78■□□□□ 0.28
CAPN1-205ENST00000526954 TSEN2Q8NCE0 465 aaKnown RBP16.78■□□□□ 0.28
CAPN1-205ENST00000526954 OR2AP1Q8NGE2 309 aa16.78■□□□□ 0.28
CAPN1-205ENST00000526954 OR2A12Q8NGT7 310 aa16.78■□□□□ 0.28
CAPN1-205ENST00000526954 TEKT5Q96M29 485 aa16.78■□□□□ 0.28
CAPN1-205ENST00000526954 TMEM121Q9BTD3 319 aa16.78■□□□□ 0.28
CAPN1-205ENST00000526954 CD248Q9HCU0 757 aa16.78■□□□□ 0.28
CAPN1-205ENST00000526954 PRSS16Q9NQE7 514 aa16.78■□□□□ 0.28
CAPN1-205ENST00000526954 HAUS2Q9NVX0 235 aa16.78■□□□□ 0.28
CAPN1-205ENST00000526954 TRHDEQ9UKU6 1024 aa16.78■□□□□ 0.28
CAPN1-205ENST00000526954 ZNF148Q9UQR1 794 aa16.78■□□□□ 0.28
CAPN1-205ENST00000526954 A0A1W2PQF6 199 aa16.77■□□□□ 0.28
CAPN1-205ENST00000526954 C5orf60A6NFR6 353 aa16.77■□□□□ 0.28
CAPN1-205ENST00000526954 CCDC188H7C350 402 aa16.77■□□□□ 0.28
CAPN1-205ENST00000526954 RNF103O00237 685 aa16.77■□□□□ 0.28
CAPN1-205ENST00000526954 GCATO75600 419 aa16.77■□□□□ 0.28
CAPN1-205ENST00000526954 HLA-DQB2P05538 268 aa16.77■□□□□ 0.28
CAPN1-205ENST00000526954 C7P10643 843 aa16.77■□□□□ 0.28
CAPN1-205ENST00000526954 HOXB2P14652 356 aa16.77■□□□□ 0.28
CAPN1-205ENST00000526954 CR2P20023 1033 aa16.77■□□□□ 0.28
CAPN1-205ENST00000526954 CES1P23141 567 aa16.77■□□□□ 0.28
CAPN1-205ENST00000526954 COILP38432 576 aaPredicted RBP16.77■□□□□ 0.28
CAPN1-205ENST00000526954 FNTAP49354 379 aa16.77■□□□□ 0.28
CAPN1-205ENST00000526954 LMNB2Q03252 620 aa16.77■□□□□ 0.28
CAPN1-205ENST00000526954 CKAP4Q07065 602 aaKnown RBP16.77■□□□□ 0.28
CAPN1-205ENST00000526954 STARD3Q14849 445 aa16.77■□□□□ 0.28
CAPN1-205ENST00000526954 CRY1Q16526 586 aa16.77■□□□□ 0.28
CAPN1-205ENST00000526954 RALGPS1Q5JS13 557 aa16.77■□□□□ 0.28
CAPN1-205ENST00000526954 ZNF567Q8N184 647 aa16.77■□□□□ 0.28
CAPN1-205ENST00000526954 ZNF366Q8N895 744 aa16.77■□□□□ 0.28
CAPN1-205ENST00000526954 FAM71DQ8N9W8 422 aa16.77■□□□□ 0.28
CAPN1-205ENST00000526954 ATL2Q8NHH9 583 aa16.77■□□□□ 0.28
CAPN1-205ENST00000526954 PBXIP1Q96AQ6 731 aa16.77■□□□□ 0.28
CAPN1-205ENST00000526954 CCDC114Q96M63 670 aa16.77■□□□□ 0.28
CAPN1-205ENST00000526954 GDAP1L1Q96MZ0 367 aa16.77■□□□□ 0.28
CAPN1-205ENST00000526954 TM6SF2Q9BZW4 377 aa16.77■□□□□ 0.28
CAPN1-205ENST00000526954 TNKS2Q9H2K2 1166 aa16.77■□□□□ 0.28
CAPN1-205ENST00000526954 MTG2Q9H4K7 406 aa16.77■□□□□ 0.28
CAPN1-205ENST00000526954 FBRSQ9HAH7 460 aa16.77■□□□□ 0.28
CAPN1-205ENST00000526954 NT5MQ9NPB1 228 aa16.77■□□□□ 0.28
CAPN1-205ENST00000526954 SEPT10Q9P0V9 454 aa16.77■□□□□ 0.28
CAPN1-205ENST00000526954 ANKRD36A6QL64 1941 aa16.76■□□□□ 0.27
CAPN1-205ENST00000526954 ALOX15BO15296 676 aa16.76■□□□□ 0.27
CAPN1-205ENST00000526954 SYNCRIPO60506 623 aaKnown RBP16.76■□□□□ 0.27
CAPN1-205ENST00000526954 SIN3BO75182 1162 aa16.76■□□□□ 0.27
CAPN1-205ENST00000526954 NEBLO76041 1014 aa16.76■□□□□ 0.27
CAPN1-205ENST00000526954 STK10O94804 968 aaKnown RBP16.76■□□□□ 0.27
CAPN1-205ENST00000526954 POP4O95707 220 aaKnown RBP16.76■□□□□ 0.27
CAPN1-205ENST00000526954 IGSF6O95976 241 aa16.76■□□□□ 0.27
CAPN1-205ENST00000526954 CHRNA3P32297 505 aa16.76■□□□□ 0.27
CAPN1-205ENST00000526954 RECQLP46063 649 aaPredicted RBP16.76■□□□□ 0.27
CAPN1-205ENST00000526954 RGRP47804 291 aa16.76■□□□□ 0.27
CAPN1-205ENST00000526954 KCNJ1P48048 391 aa16.76■□□□□ 0.27
CAPN1-205ENST00000526954 GDF10P55107 478 aa16.76■□□□□ 0.27
CAPN1-205ENST00000526954 ELAVL3Q14576 367 aaKnown RBP16.76■□□□□ 0.27
CAPN1-205ENST00000526954 KIAA1211LQ6NV74 962 aa16.76■□□□□ 0.27
CAPN1-205ENST00000526954 TTC27Q6P3X3 843 aa16.76■□□□□ 0.27
CAPN1-205ENST00000526954 CCDC137Q6PK04 289 aaKnown RBP16.76■□□□□ 0.27
CAPN1-205ENST00000526954 TMEM92Q6UXU6 159 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms