RNA–Protein interactions for RNA: ENST00000526734.5

VPS28-206, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 570 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-206ENST00000526734 OR2AP1Q8NGE2 309 aa21■□□□□ 0.95
VPS28-206ENST00000526734 GRIN3AQ8TCU5 1115 aa21■□□□□ 0.95
VPS28-206ENST00000526734 SERAC1Q96JX3 654 aa21■□□□□ 0.95
VPS28-206ENST00000526734 SLC6A18Q96N87 628 aa21■□□□□ 0.95
VPS28-206ENST00000526734 SNRNP25Q9BV90 132 aaKnown RBP21■□□□□ 0.95
VPS28-206ENST00000526734 DHX35Q9H5Z1 703 aaKnown RBP21■□□□□ 0.95
VPS28-206ENST00000526734 AASDHPPTQ9NRN7 309 aa21■□□□□ 0.95
VPS28-206ENST00000526734 TM7SF3Q9NS93 570 aa21■□□□□ 0.95
VPS28-206ENST00000526734 MYO1AQ9UBC5 1043 aa21■□□□□ 0.95
VPS28-206ENST00000526734 FCF1Q9Y324 198 aaKnown RBP21■□□□□ 0.95
VPS28-206ENST00000526734 SLCO1B1Q9Y6L6 691 aa21■□□□□ 0.95
VPS28-206ENST00000526734 WASF2Q9Y6W5 498 aa21■□□□□ 0.95
VPS28-206ENST00000526734 ASCC3Q8N3C0 2202 aaKnown RBP20.99■□□□□ 0.95
VPS28-206ENST00000526734 RASA4BC9J798 803 aa20.99■□□□□ 0.95
VPS28-206ENST00000526734 EEF2KO00418 725 aaKnown RBP20.99■□□□□ 0.95
VPS28-206ENST00000526734 GIPC1O14908 333 aa20.99■□□□□ 0.95
VPS28-206ENST00000526734 FLRT2O43155 660 aa20.99■□□□□ 0.95
VPS28-206ENST00000526734 RASA4O43374 803 aa20.99■□□□□ 0.95
VPS28-206ENST00000526734 MAGEC1O60732 1142 aa20.99■□□□□ 0.95
VPS28-206ENST00000526734 RNGTTO60942 597 aaKnown RBP20.99■□□□□ 0.95
VPS28-206ENST00000526734 LRCH4O75427 683 aa20.99■□□□□ 0.95
VPS28-206ENST00000526734 LEFTY1O75610 366 aa20.99■□□□□ 0.95
VPS28-206ENST00000526734 MIPP30301 263 aa20.99■□□□□ 0.95
VPS28-206ENST00000526734 CTSKP43235 329 aa20.99■□□□□ 0.95
VPS28-206ENST00000526734 CCT8P50990 548 aa20.99■□□□□ 0.95
VPS28-206ENST00000526734 PPP2CBP62714 309 aa20.99■□□□□ 0.95
VPS28-206ENST00000526734 PPP2CAP67775 309 aa20.99■□□□□ 0.95
VPS28-206ENST00000526734 SERINC3Q13530 473 aa20.99■□□□□ 0.95
VPS28-206ENST00000526734 PIGHQ14442 188 aaPredicted RBP20.99■□□□□ 0.95
VPS28-206ENST00000526734 ZNF423Q2M1K9 1284 aa20.99■□□□□ 0.95
VPS28-206ENST00000526734 POM121L1PQ3SYA9 428 aa20.99■□□□□ 0.95
VPS28-206ENST00000526734 ARSIQ5FYB1 569 aa20.99■□□□□ 0.95
VPS28-206ENST00000526734 SPECC1LQ69YQ0 1117 aa20.99■□□□□ 0.95
VPS28-206ENST00000526734 IQCHQ86VS3 1027 aa20.99■□□□□ 0.95
VPS28-206ENST00000526734 NAXDQ8IW45 347 aa20.99■□□□□ 0.95
VPS28-206ENST00000526734 ARRDC3Q96B67 414 aa20.99■□□□□ 0.95
VPS28-206ENST00000526734 OSBPL1AQ9BXW6 950 aa20.99■□□□□ 0.95
VPS28-206ENST00000526734 NOL6Q9H6R4 1146 aaKnown RBP20.99■□□□□ 0.95
VPS28-206ENST00000526734 ANGPTL2Q9UKU9 493 aa20.99■□□□□ 0.95
VPS28-206ENST00000526734 SNX11Q9Y5W9 270 aa20.99■□□□□ 0.95
VPS28-206ENST00000526734 LAMA1P25391 3075 aa20.98■□□□□ 0.95
VPS28-206ENST00000526734 CHD5Q8TDI0 1954 aa20.98■□□□□ 0.95
VPS28-206ENST00000526734 PLK4O00444 970 aa20.98■□□□□ 0.95
VPS28-206ENST00000526734 YKT6O15498 198 aa20.98■□□□□ 0.95
VPS28-206ENST00000526734 BUB1O43683 1085 aa20.98■□□□□ 0.95
VPS28-206ENST00000526734 POP4O95707 220 aaKnown RBP20.98■□□□□ 0.95
VPS28-206ENST00000526734 TPM1P09493 284 aa20.98■□□□□ 0.95
VPS28-206ENST00000526734 CASP14P31944 242 aa20.98■□□□□ 0.95
VPS28-206ENST00000526734 HCAR3P49019 387 aa20.98■□□□□ 0.95
VPS28-206ENST00000526734 RAD51Q06609 339 aa20.98■□□□□ 0.95
VPS28-206ENST00000526734 INAVAQ3KP66 663 aa20.98■□□□□ 0.95
VPS28-206ENST00000526734 ALKBH5Q6P6C2 394 aaKnown RBP20.98■□□□□ 0.95
VPS28-206ENST00000526734 ARFGAP1Q8N6T3 406 aa20.98■□□□□ 0.95
VPS28-206ENST00000526734 RAB7BQ96AH8 199 aa20.98■□□□□ 0.95
VPS28-206ENST00000526734 GDAP1L1Q96MZ0 367 aa20.98■□□□□ 0.95
VPS28-206ENST00000526734 TM6SF2Q9BZW4 377 aa20.98■□□□□ 0.95
VPS28-206ENST00000526734 EBF2Q9HAK2 575 aa20.98■□□□□ 0.95
VPS28-206ENST00000526734 HECAQ9UBI9 543 aaPredicted RBP20.98■□□□□ 0.95
VPS28-206ENST00000526734 PCSK1NQ9UHG2 260 aa20.98■□□□□ 0.95
VPS28-206ENST00000526734 FNDC3AQ9Y2H6 1198 aaKnown RBP20.98■□□□□ 0.95
VPS28-206ENST00000526734 A0A1W2PR77 199 aa20.97■□□□□ 0.95
VPS28-206ENST00000526734 PRAMEF26H0Y7S4 382 aa20.97■□□□□ 0.95
VPS28-206ENST00000526734 DAPK3O43293 454 aa20.97■□□□□ 0.95
VPS28-206ENST00000526734 AP1G1O43747 822 aa20.97■□□□□ 0.95
VPS28-206ENST00000526734 PCDHGA12O60330 932 aa20.97■□□□□ 0.95
VPS28-206ENST00000526734 TAS2R38P59533 333 aa20.97■□□□□ 0.95
VPS28-206ENST00000526734 NFKBIBQ15653 356 aa20.97■□□□□ 0.95
VPS28-206ENST00000526734 BOLA3Q53S33 107 aa20.97■□□□□ 0.95
VPS28-206ENST00000526734 DBX2Q6ZNG2 339 aa20.97■□□□□ 0.95
VPS28-206ENST00000526734 RFX8Q6ZV50 586 aa20.97■□□□□ 0.95
VPS28-206ENST00000526734 DNAAF5Q86Y56 855 aa20.97■□□□□ 0.95
VPS28-206ENST00000526734 OXR1Q8N573 874 aa20.97■□□□□ 0.95
VPS28-206ENST00000526734 NIPA2Q8N8Q9 360 aa20.97■□□□□ 0.95
VPS28-206ENST00000526734 MFSD2AQ8NA29 543 aa20.97■□□□□ 0.95
VPS28-206ENST00000526734 HMCESQ96FZ2 354 aa20.97■□□□□ 0.95
VPS28-206ENST00000526734 PEBP4Q96S96 227 aa20.97■□□□□ 0.95
VPS28-206ENST00000526734 TRIM7Q9C029 511 aa20.97■□□□□ 0.95
VPS28-206ENST00000526734 ZDHHC6Q9H6R6 413 aa20.97■□□□□ 0.95
VPS28-206ENST00000526734 LRRC19Q9H756 370 aa20.97■□□□□ 0.95
VPS28-206ENST00000526734 ZWILCHQ9H900 591 aa20.97■□□□□ 0.95
VPS28-206ENST00000526734 IL21RQ9HBE5 538 aa20.97■□□□□ 0.95
VPS28-206ENST00000526734 GDF3Q9NR23 364 aa20.97■□□□□ 0.95
VPS28-206ENST00000526734 GPATCH2LQ9NWQ4 482 aa20.97■□□□□ 0.95
VPS28-206ENST00000526734 ARHGAP20Q9P2F6 1191 aa20.97■□□□□ 0.95
VPS28-206ENST00000526734 IP6K2Q9UHH9 426 aa20.97■□□□□ 0.95
VPS28-206ENST00000526734 LCMT1Q9UIC8 334 aa20.97■□□□□ 0.95
VPS28-206ENST00000526734 PCDHB9Q9Y5E1 797 aa20.97■□□□□ 0.95
VPS28-206ENST00000526734 ADAMTS9Q9P2N4 1935 aa20.97■□□□□ 0.95
VPS28-206ENST00000526734 A0A087X0T9 212 aa20.96■□□□□ 0.95
VPS28-206ENST00000526734 ARHGAP42A6NI28 874 aa20.96■□□□□ 0.95
VPS28-206ENST00000526734 SH3BP5O60239 455 aa20.96■□□□□ 0.95
VPS28-206ENST00000526734 TMCC1O94876 653 aa20.96■□□□□ 0.95
VPS28-206ENST00000526734 TRIM16O95361 564 aa20.96■□□□□ 0.95
VPS28-206ENST00000526734 IGSF6O95976 241 aa20.96■□□□□ 0.95
VPS28-206ENST00000526734 CYP1A2P05177 515 aa20.96■□□□□ 0.95
VPS28-206ENST00000526734 FAM228BP0C875 321 aa20.96■□□□□ 0.95
VPS28-206ENST00000526734 SIM1P81133 766 aaPredicted RBP20.96■□□□□ 0.95
VPS28-206ENST00000526734 FBXL19Q6PCT2 694 aa20.96■□□□□ 0.95
VPS28-206ENST00000526734 CYP4V2Q6ZWL3 525 aaPredicted RBP20.96■□□□□ 0.95
VPS28-206ENST00000526734 HORMAD1Q86X24 394 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms