RNA–Protein interactions for RNA: ENST00000526141.1

TRAPPC4-207, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 392 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-207ENST00000526141 CPOXP36551 454 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 MTHFRP42898 656 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 KIR2DL3P43628 341 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 GSTM5P46439 218 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 PCP4P48539 62 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 NT5C2P49902 561 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 NPY4RP50391 375 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 PGDP52209 483 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 PRKAG1P54619 331 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 MFAP4P55083 255 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 HTD2P86397 168 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 ATP2C1P98194 919 aaPredicted RBP3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 RNASELQ05823 741 aaKnown RBP3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 KLHL30Q0D2K2 578 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 FHL3Q13643 280 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 ITGA7Q13683 1181 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 MEP1BQ16820 701 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 C15orf59Q2T9L4 293 aaPredicted RBP3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 P3H1Q32P28 736 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 DPCR1Q3MIW9 517 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 ZIK1Q3SY52 487 aaPredicted RBP3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 KBTBD12Q3ZCT8 623 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 SUPT20HL1Q3ZLR7 823 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 RUNDC3AQ59EK9 446 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 NHSL2Q5HYW2 709 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 CERCAMQ5T4B2 595 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 HECTD2Q5U5R9 776 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 GKAP1Q5VSY0 366 aaPredicted RBP3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 LRRC55Q6ZSA7 311 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 PIK3AP1Q6ZUJ8 805 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 HTR3DQ70Z44 454 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 UBE3BQ7Z3V4 1068 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 KRT27Q7Z3Y8 459 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 FAM217AQ8IXS0 508 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 MINDY1Q8N5J2 469 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 XXYLT1Q8NBI6 393 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 ZBTB44Q8NCP5 570 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 SLC17A8Q8NDX2 589 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 DENND6BQ8NEG7 585 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 IPMKQ8NFU5 416 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 SUN3Q8TAQ9 357 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 DNAJB14Q8TBM8 379 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 SEPT1Q8WYJ6 367 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 MRPS27Q92552 414 aaKnown RBP3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 GCDHQ92947 438 aaPredicted RBP3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 PPP2R3CQ969Q6 453 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 SYAP1Q96A49 352 aaPredicted RBP3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 ARRDC3Q96B67 414 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 TMCO6Q96DC7 493 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 ERO1AQ96HE7 468 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 VPS39Q96JC1 886 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 C1orf74Q96LT6 269 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 CFAP53Q96M91 514 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 KLHL32Q96NJ5 620 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 HIST1H2AAQ96QV6 131 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 EIF3CQ99613 913 aaKnown RBP3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 TCF25Q9BQ70 676 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 SYT17Q9BSW7 474 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 SLC25A23Q9BV35 468 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 MLPHQ9BV36 600 aaPredicted RBP3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 IMPG2Q9BZV3 1241 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 TTYH3Q9C0H2 523 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 NT5C3AQ9H0P0 336 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 ST6GALNAC4Q9H4F1 302 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 KCNK9Q9NPC2 374 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 ABCB8Q9NUT2 735 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 FBXO28Q9NVF7 368 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 ACTR3BQ9P1U1 418 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 RABL2AQ9UBK7 228 aaPredicted RBP3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 IL19Q9UHD0 177 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 LEF1Q9UJU2 399 aaPredicted RBP3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 UBE2J1Q9Y385 318 aaPredicted RBP3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 KIF3AQ9Y496 699 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 TRIM17Q9Y577 477 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 PCDHA10Q9Y5I2 948 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 COL4A3Q01955 1670 aa3.17□□□□□ -1.9
TRAPPC4-207ENST00000526141 ATAD2BQ9ULI0 1458 aa3.16□□□□□ -1.9
TRAPPC4-207ENST00000526141 TBC1D3DA0A087WVF3 549 aa3.16□□□□□ -1.9
TRAPPC4-207ENST00000526141 TBC1D3IA0A087WXS9 549 aa3.16□□□□□ -1.9
TRAPPC4-207ENST00000526141 TBC1D3EA0A087X179 549 aa3.16□□□□□ -1.9
TRAPPC4-207ENST00000526141 TBC1D3KA0A087X1G2 549 aa3.16□□□□□ -1.9
TRAPPC4-207ENST00000526141 A0A1W2PQF6 199 aa3.16□□□□□ -1.9
TRAPPC4-207ENST00000526141 A0A1W2PRV1 198 aa3.16□□□□□ -1.9
TRAPPC4-207ENST00000526141 OR2A25A4D2G3 310 aa3.16□□□□□ -1.9
TRAPPC4-207ENST00000526141 GRID2IPA4D2P6 1211 aa3.16□□□□□ -1.9
TRAPPC4-207ENST00000526141 RGSL1A5PLK6 1076 aa3.16□□□□□ -1.9
TRAPPC4-207ENST00000526141 TBC1D3BA6NDS4 549 aa3.16□□□□□ -1.9
TRAPPC4-207ENST00000526141 TBC1D3FA6NER0 549 aaPredicted RBP3.16□□□□□ -1.9
TRAPPC4-207ENST00000526141 AGAP5A6NIR3 686 aa3.16□□□□□ -1.9
TRAPPC4-207ENST00000526141 BTBD18B2RXH4 712 aa3.16□□□□□ -1.9
TRAPPC4-207ENST00000526141 TBC1D3LB9A6J9 549 aa3.16□□□□□ -1.9
TRAPPC4-207ENST00000526141 PROB1E7EW31 1015 aa3.16□□□□□ -1.9
TRAPPC4-207ENST00000526141 PRPF4O43172 522 aaKnown RBP eCLIP3.16□□□□□ -1.9
TRAPPC4-207ENST00000526141 RTN2O75298 545 aa3.16□□□□□ -1.9
TRAPPC4-207ENST00000526141 PALMO75781 387 aa3.16□□□□□ -1.9
TRAPPC4-207ENST00000526141 RECQL4O94761 1208 aa3.16□□□□□ -1.9
TRAPPC4-207ENST00000526141 SIX3O95343 332 aaPredicted RBP3.16□□□□□ -1.9
TRAPPC4-207ENST00000526141 JUNP05412 331 aaKnown RBP3.16□□□□□ -1.9
TRAPPC4-207ENST00000526141 TUBBP07437 444 aa3.16□□□□□ -1.9
TRAPPC4-207ENST00000526141 TBC1D3HP0C7X1 549 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms