RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 DSCR3O14972 297 aa4.84□□□□□ -1.63
CSDE1-211ENST00000525970 PAGE4O60829 102 aa4.84□□□□□ -1.63
CSDE1-211ENST00000525970 JTBO76095 146 aa4.84□□□□□ -1.63
CSDE1-211ENST00000525970 CLTBP09497 229 aa4.84□□□□□ -1.63
CSDE1-211ENST00000525970 ALDOCP09972 364 aaKnown RBP4.84□□□□□ -1.63
CSDE1-211ENST00000525970 RFPL3SP0C7P2 107 aa4.84□□□□□ -1.63
CSDE1-211ENST00000525970 HOXB9P17482 250 aaPredicted RBP4.84□□□□□ -1.63
CSDE1-211ENST00000525970 FPR3P25089 353 aa4.84□□□□□ -1.63
CSDE1-211ENST00000525970 KRTAP10-9P60411 292 aa4.84□□□□□ -1.63
CSDE1-211ENST00000525970 WDR5P61964 334 aaKnown RBP4.84□□□□□ -1.63
CSDE1-211ENST00000525970 PSMC6P62333 389 aa4.84□□□□□ -1.63
CSDE1-211ENST00000525970 KRT83P78385 493 aa4.84□□□□□ -1.63
CSDE1-211ENST00000525970 NEXNQ0ZGT2 675 aa4.84□□□□□ -1.63
CSDE1-211ENST00000525970 AIMP2Q13155 320 aaKnown RBP4.84□□□□□ -1.63
CSDE1-211ENST00000525970 AP5B1Q2VPB7 878 aa4.84□□□□□ -1.63
CSDE1-211ENST00000525970 RAB41Q5JT25 222 aa4.84□□□□□ -1.63
CSDE1-211ENST00000525970 NAA16Q6N069 864 aaPredicted RBP4.84□□□□□ -1.63
CSDE1-211ENST00000525970 TTI2Q6NXR4 508 aa4.84□□□□□ -1.63
CSDE1-211ENST00000525970 KIRREL2Q6UWL6 708 aa4.84□□□□□ -1.63
CSDE1-211ENST00000525970 NAPRTQ6XQN6 538 aa4.84□□□□□ -1.63
CSDE1-211ENST00000525970 ZNF788Q6ZQV5 615 aa4.84□□□□□ -1.63
CSDE1-211ENST00000525970 MDGA2Q7Z553 956 aa4.84□□□□□ -1.63
CSDE1-211ENST00000525970 NEK8Q86SG6 692 aa4.84□□□□□ -1.63
CSDE1-211ENST00000525970 VPS52Q8N1B4 723 aa4.84□□□□□ -1.63
CSDE1-211ENST00000525970 FRMD1Q8N878 549 aa4.84□□□□□ -1.63
CSDE1-211ENST00000525970 TMEM116Q8NCL8 245 aa4.84□□□□□ -1.63
CSDE1-211ENST00000525970 ABHD11Q8NFV4 315 aa4.84□□□□□ -1.63
CSDE1-211ENST00000525970 FAM110DQ8TAY7 271 aaPredicted RBP4.84□□□□□ -1.63
CSDE1-211ENST00000525970 NEK9Q8TD19 979 aa4.84□□□□□ -1.63
CSDE1-211ENST00000525970 GPR78Q96P69 363 aa4.84□□□□□ -1.63
CSDE1-211ENST00000525970 MAP7D2Q96T17 732 aa4.84□□□□□ -1.63
CSDE1-211ENST00000525970 RSPH9Q9H1X1 276 aaPredicted RBP4.84□□□□□ -1.63
CSDE1-211ENST00000525970 TXNRD2Q9NNW7 524 aa4.84□□□□□ -1.63
CSDE1-211ENST00000525970 TMEM248Q9NWD8 314 aa4.84□□□□□ -1.63
CSDE1-211ENST00000525970 EHD2Q9NZN4 543 aa4.84□□□□□ -1.63
CSDE1-211ENST00000525970 PEMTQ9UBM1 199 aa4.84□□□□□ -1.63
CSDE1-211ENST00000525970 UPB1Q9UBR1 384 aa4.84□□□□□ -1.63
CSDE1-211ENST00000525970 MORF4L1Q9UBU8 362 aa4.84□□□□□ -1.63
CSDE1-211ENST00000525970 ZNF70Q9UC06 446 aaPredicted RBP4.84□□□□□ -1.63
CSDE1-211ENST00000525970 CAPN7Q9Y6W3 813 aa4.84□□□□□ -1.63
CSDE1-211ENST00000525970 FNDC1Q4ZHG4 1894 aaPredicted RBP4.83□□□□□ -1.64
CSDE1-211ENST00000525970 FAM237BA0A1B0GVD1 139 aa4.83□□□□□ -1.64
CSDE1-211ENST00000525970 A0A1W2PQ09 198 aa4.83□□□□□ -1.64
CSDE1-211ENST00000525970 TARM1B6A8C7 271 aa4.83□□□□□ -1.64
CSDE1-211ENST00000525970 MCIDASD6RGH6 385 aa4.83□□□□□ -1.64
CSDE1-211ENST00000525970 CNTN5O94779 1100 aa4.83□□□□□ -1.64
CSDE1-211ENST00000525970 CSPG5O95196 566 aa4.83□□□□□ -1.64
CSDE1-211ENST00000525970 PDE8BO95263 885 aa4.83□□□□□ -1.64
CSDE1-211ENST00000525970 ZNF8P17098 575 aaPredicted RBP4.83□□□□□ -1.64
CSDE1-211ENST00000525970 SNX16P57768 344 aa4.83□□□□□ -1.64
CSDE1-211ENST00000525970 SRSF4Q08170 494 aaKnown RBP4.83□□□□□ -1.64
CSDE1-211ENST00000525970 RASA2Q15283 850 aa4.83□□□□□ -1.64
CSDE1-211ENST00000525970 FBXO43Q4G163 708 aa4.83□□□□□ -1.64
CSDE1-211ENST00000525970 TMEM119Q4V9L6 283 aa4.83□□□□□ -1.64
CSDE1-211ENST00000525970 FCRLBQ6BAA4 426 aa4.83□□□□□ -1.64
CSDE1-211ENST00000525970 SUMO4Q6EEV6 95 aa4.83□□□□□ -1.64
CSDE1-211ENST00000525970 AADACL2Q6P093 401 aa4.83□□□□□ -1.64
CSDE1-211ENST00000525970 KLHL35Q6PF15 583 aa4.83□□□□□ -1.64
CSDE1-211ENST00000525970 RRM2BQ7LG56 351 aa4.83□□□□□ -1.64
CSDE1-211ENST00000525970 RNF144BQ7Z419 303 aa4.83□□□□□ -1.64
CSDE1-211ENST00000525970 TMEM200AQ86VY9 491 aa4.83□□□□□ -1.64
CSDE1-211ENST00000525970 SCML4Q8N228 414 aa4.83□□□□□ -1.64
CSDE1-211ENST00000525970 MAFAQ8NHW3 353 aaPredicted RBP4.83□□□□□ -1.64
CSDE1-211ENST00000525970 NOC3LQ8WTT2 800 aaKnown RBP4.83□□□□□ -1.64
CSDE1-211ENST00000525970 WDFY2Q96P53 400 aa4.83□□□□□ -1.64
CSDE1-211ENST00000525970 PDE7BQ9NP56 450 aa4.83□□□□□ -1.64
CSDE1-211ENST00000525970 C20orf141Q9NUB4 165 aa4.83□□□□□ -1.64
CSDE1-211ENST00000525970 SPATS2LQ9NUQ6 558 aaKnown RBP4.83□□□□□ -1.64
CSDE1-211ENST00000525970 ASIC5Q9NY37 505 aa4.83□□□□□ -1.64
CSDE1-211ENST00000525970 NCKIPSDQ9NZQ3 722 aa4.83□□□□□ -1.64
CSDE1-211ENST00000525970 SUCLA2Q9P2R7 463 aaPredicted RBP4.83□□□□□ -1.64
CSDE1-211ENST00000525970 INTS6Q9UL03 887 aaKnown RBP4.83□□□□□ -1.64
CSDE1-211ENST00000525970 DTX4Q9Y2E6 619 aa4.83□□□□□ -1.64
CSDE1-211ENST00000525970 CLDN16Q9Y5I7 305 aa4.83□□□□□ -1.64
CSDE1-211ENST00000525970 ARHGEF17Q96PE2 2063 aaPredicted RBP4.83□□□□□ -1.64
CSDE1-211ENST00000525970 SPATA31A5Q5VU36 1347 aa4.82□□□□□ -1.64
CSDE1-211ENST00000525970 SPATA31A7Q8IWB4 1347 aa4.82□□□□□ -1.64
CSDE1-211ENST00000525970 PABPN1LA6NDY0 278 aaKnown RBP4.82□□□□□ -1.64
CSDE1-211ENST00000525970 MYO1GB0I1T2 1018 aa4.82□□□□□ -1.64
CSDE1-211ENST00000525970 FYB1O15117 783 aa4.82□□□□□ -1.64
CSDE1-211ENST00000525970 ADAM20O43506 726 aa4.82□□□□□ -1.64
CSDE1-211ENST00000525970 CEP104O60308 925 aa4.82□□□□□ -1.64
CSDE1-211ENST00000525970 CCNT1O60563 726 aaKnown RBP4.82□□□□□ -1.64
CSDE1-211ENST00000525970 TACC1O75410 805 aa4.82□□□□□ -1.64
CSDE1-211ENST00000525970 GALTP07902 379 aa4.82□□□□□ -1.64
CSDE1-211ENST00000525970 CD72P21854 359 aa4.82□□□□□ -1.64
CSDE1-211ENST00000525970 TYK2P29597 1187 aa4.82□□□□□ -1.64
CSDE1-211ENST00000525970 TTKP33981 857 aa4.82□□□□□ -1.64
CSDE1-211ENST00000525970 EIF2DP41214 584 aaKnown RBP4.82□□□□□ -1.64
CSDE1-211ENST00000525970 DPP6P42658 865 aa4.82□□□□□ -1.64
CSDE1-211ENST00000525970 PTPN9P43378 593 aa4.82□□□□□ -1.64
CSDE1-211ENST00000525970 CPA2P48052 419 aa4.82□□□□□ -1.64
CSDE1-211ENST00000525970 CTCFP49711 727 aaPredicted RBP4.82□□□□□ -1.64
CSDE1-211ENST00000525970 ZNF81P51508 661 aa4.82□□□□□ -1.64
CSDE1-211ENST00000525970 PROK1P58294 105 aa4.82□□□□□ -1.64
CSDE1-211ENST00000525970 CYP4F2P78329 520 aa4.82□□□□□ -1.64
CSDE1-211ENST00000525970 CYP4A11Q02928 519 aa4.82□□□□□ -1.64
CSDE1-211ENST00000525970 ZBTB16Q05516 673 aa4.82□□□□□ -1.64
CSDE1-211ENST00000525970 CALD1Q05682 793 aaKnown RBP4.82□□□□□ -1.64
CSDE1-211ENST00000525970 PSMD6Q15008 389 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms