RNA–Protein interactions for RNA: ENST00000525962.5

TGFBR3-207, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 3,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-207ENST00000525962 UGP2Q16851 508 aa7.04□□□□□ -1.28
TGFBR3-207ENST00000525962 SPOUT1Q5T280 376 aaKnown RBP7.04□□□□□ -1.28
TGFBR3-207ENST00000525962 OR52E8Q6IFG1 317 aa7.04□□□□□ -1.28
TGFBR3-207ENST00000525962 OGFOD2Q6N063 350 aa7.04□□□□□ -1.28
TGFBR3-207ENST00000525962 ESRP1Q6NXG1 681 aaKnown RBP7.04□□□□□ -1.28
TGFBR3-207ENST00000525962 METTL7BQ6UX53 244 aa7.04□□□□□ -1.28
TGFBR3-207ENST00000525962 ZPBP2Q6X784 338 aa7.04□□□□□ -1.28
TGFBR3-207ENST00000525962 PATL1Q86TB9 770 aaKnown RBP7.04□□□□□ -1.28
TGFBR3-207ENST00000525962 ZNF567Q8N184 647 aa7.04□□□□□ -1.28
TGFBR3-207ENST00000525962 ENDOVQ8N8Q3 282 aaKnown RBP7.04□□□□□ -1.28
TGFBR3-207ENST00000525962 DNAJB3Q8WWF6 145 aa7.04□□□□□ -1.28
TGFBR3-207ENST00000525962 MTFMTQ96DP5 389 aaKnown RBP7.04□□□□□ -1.28
TGFBR3-207ENST00000525962 CASS4Q9NQ75 786 aa7.04□□□□□ -1.28
TGFBR3-207ENST00000525962 CD274Q9NZQ7 290 aa7.04□□□□□ -1.28
TGFBR3-207ENST00000525962 SFMBT1Q9UHJ3 866 aa7.04□□□□□ -1.28
TGFBR3-207ENST00000525962 ZMYM5Q9UJ78 669 aa7.04□□□□□ -1.28
TGFBR3-207ENST00000525962 A0A1B0GTW7 788 aa7.04□□□□□ -1.28
TGFBR3-207ENST00000525962 C2CD4BA6NLJ0 364 aa7.04□□□□□ -1.28
TGFBR3-207ENST00000525962 H3BRB1 525 aa7.04□□□□□ -1.28
TGFBR3-207ENST00000525962 ZSCAN9O15535 394 aaPredicted RBP7.04□□□□□ -1.28
TGFBR3-207ENST00000525962 BCL10O95999 233 aa7.04□□□□□ -1.28
TGFBR3-207ENST00000525962 MTHFD1P11586 935 aaKnown RBP7.04□□□□□ -1.28
TGFBR3-207ENST00000525962 GPD2P43304 727 aa7.04□□□□□ -1.28
TGFBR3-207ENST00000525962 DDX39BQ13838 428 aaKnown RBP7.04□□□□□ -1.28
TGFBR3-207ENST00000525962 CCNIQ14094 377 aa7.04□□□□□ -1.28
TGFBR3-207ENST00000525962 DMC1Q14565 340 aa7.04□□□□□ -1.28
TGFBR3-207ENST00000525962 FBXO47Q5MNV8 452 aa7.04□□□□□ -1.28
TGFBR3-207ENST00000525962 NAPEPLDQ6IQ20 393 aa7.04□□□□□ -1.28
TGFBR3-207ENST00000525962 PRR23BQ6ZRT6 265 aa7.04□□□□□ -1.28
TGFBR3-207ENST00000525962 SETD3Q86TU7 594 aaPredicted RBP7.04□□□□□ -1.28
TGFBR3-207ENST00000525962 APLFQ8IW19 511 aaPredicted RBP7.04□□□□□ -1.28
TGFBR3-207ENST00000525962 REPS2Q8NFH8 660 aa7.04□□□□□ -1.28
TGFBR3-207ENST00000525962 RDM1Q8NG50 284 aa7.04□□□□□ -1.28
TGFBR3-207ENST00000525962 OR6J1Q8NGC5 347 aa7.04□□□□□ -1.28
TGFBR3-207ENST00000525962 ZFP42Q96MM3 310 aa7.04□□□□□ -1.28
TGFBR3-207ENST00000525962 FRMD8Q9BZ67 464 aaPredicted RBP7.04□□□□□ -1.28
TGFBR3-207ENST00000525962 TUT1Q9H6E5 874 aaKnown RBP7.04□□□□□ -1.28
TGFBR3-207ENST00000525962 NOL6Q9H6R4 1146 aaKnown RBP7.04□□□□□ -1.28
TGFBR3-207ENST00000525962 DNAAF2Q9NVR5 837 aaKnown RBP7.04□□□□□ -1.28
TGFBR3-207ENST00000525962 GMPR2Q9P2T1 348 aaKnown RBP7.04□□□□□ -1.28
TGFBR3-207ENST00000525962 ZDHHC2Q9UIJ5 367 aa7.04□□□□□ -1.28
TGFBR3-207ENST00000525962 KIF1AQ12756 1690 aa7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 KANSL1LA0AUZ9 987 aa7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 OR51F1A6NGY5 319 aa7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 C9IYK1 514 aa7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 MAGEB2O15479 319 aa7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 RGS5O15539 181 aa7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 MSI1O43347 362 aaKnown RBP7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 RHOBTB1O94844 696 aa7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 ALDOAP04075 364 aaKnown RBP7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 HSMCR30P0CW71 290 aa7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 CYP4B1P13584 511 aa7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 BDNFP23560 247 aa7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 HMOX2P30519 316 aa7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 ENTPD1P49961 510 aa7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 ARHGDIAP52565 204 aa7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 GJA9P57773 515 aa7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 GNA12Q03113 381 aa7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 SLC10A2Q12908 348 aaPredicted RBP7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 SPIDRQ14159 915 aa7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 ZNF235Q14590 738 aa7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 PPP1R3AQ16821 1122 aa7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 SYPL2Q5VXT5 272 aa7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 CCDC103Q8IW40 242 aa7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 PQLC3Q8N755 202 aa7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 ZNF555Q8NEP9 628 aa7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 GRIN3AQ8TCU5 1115 aa7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 ZC3H15Q8WU90 426 aaKnown RBP7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 RHOBTB2Q9BYZ6 727 aa7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 SPATC1LQ9H0A9 340 aa7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 LATS2Q9NRM7 1088 aa7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 TRNAU1APQ9NX07 287 aaKnown RBP7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 OR12D3Q9UGF7 316 aa7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 RSL24D1Q9UHA3 163 aaKnown RBP7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 FARP1Q9Y4F1 1045 aaPredicted RBP7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 RAD54BQ9Y620 910 aa7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 TRPC5OSA6NMA1 111 aa7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 F8W8V4 182 aa7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 H0Y626 953 aa7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 NDUFS3O75489 264 aa7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 TRIM16O95361 564 aa7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 TGDSO95455 350 aa7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 PTPN1P18031 435 aaKnown RBP7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 FASP25445 335 aa7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 PSMB9P28065 219 aa7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 EPHX2P34913 555 aa7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 PPARGP37231 505 aaPredicted RBP7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 BST2Q10589 180 aaKnown RBP7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 PTP4A2Q12974 167 aa7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 BNIP3Q12983 259 aa7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 GRTP1Q5TC63 336 aa7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 MFSD4BQ5TF39 518 aa7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 FOXB2Q5VYV0 432 aa7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 FAM35AQ86V20 835 aa7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 TTC30AQ86WT1 665 aa7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 CHSY1Q86X52 802 aa7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 BBS5Q8N3I7 341 aa7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 FSTL5Q8N475 847 aaPredicted RBP7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 PSD4Q8NDX1 1056 aa7.03□□□□□ -1.28
TGFBR3-207ENST00000525962 LPPQ93052 612 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms