RNA–Protein interactions for RNA: ENST00000525167.1

TSKU-202, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-202ENST00000525167 SPACA3Q8IXA5 215 aa17.49■□□□□ 0.39
TSKU-202ENST00000525167 PLPP6Q8IY26 295 aa17.49■□□□□ 0.39
TSKU-202ENST00000525167 MSANTD4Q8NCY6 345 aa17.49■□□□□ 0.39
TSKU-202ENST00000525167 GRAMD1AQ96CP6 724 aa17.49■□□□□ 0.39
TSKU-202ENST00000525167 HIC2Q96JB3 615 aa17.49■□□□□ 0.39
TSKU-202ENST00000525167 APOLD1Q96LR9 279 aa17.49■□□□□ 0.39
TSKU-202ENST00000525167 HEPHQ9BQS7 1158 aa17.49■□□□□ 0.39
TSKU-202ENST00000525167 SLC17A9Q9BYT1 436 aa17.49■□□□□ 0.39
TSKU-202ENST00000525167 ZYG11BQ9C0D3 744 aa17.49■□□□□ 0.39
TSKU-202ENST00000525167 TNKS2Q9H2K2 1166 aa17.49■□□□□ 0.39
TSKU-202ENST00000525167 PLCB1Q9NQ66 1216 aa17.49■□□□□ 0.39
TSKU-202ENST00000525167 MPP6Q9NZW5 540 aa17.49■□□□□ 0.39
TSKU-202ENST00000525167 PPARGC1AQ9UBK2 798 aaKnown RBP17.49■□□□□ 0.39
TSKU-202ENST00000525167 ZNF212Q9UDV6 495 aa17.49■□□□□ 0.39
TSKU-202ENST00000525167 AJAP1Q9UKB5 411 aaPredicted RBP17.49■□□□□ 0.39
TSKU-202ENST00000525167 CSNK1G3Q9Y6M4 447 aa17.49■□□□□ 0.39
TSKU-202ENST00000525167 ASXL3Q9C0F0 2248 aa17.49■□□□□ 0.39
TSKU-202ENST00000525167 DOCK9Q9BZ29 2069 aa17.49■□□□□ 0.39
TSKU-202ENST00000525167 PTPRQQ9UMZ3 2332 aa17.48■□□□□ 0.39
TSKU-202ENST00000525167 SPTY2D1-AS1A0A0U1RR47 76 aa17.48■□□□□ 0.39
TSKU-202ENST00000525167 H3BM21 787 aa17.48■□□□□ 0.39
TSKU-202ENST00000525167 K7ESM1 405 aa17.48■□□□□ 0.39
TSKU-202ENST00000525167 CSF2P04141 144 aa17.48■□□□□ 0.39
TSKU-202ENST00000525167 NME1P15531 152 aaKnown RBP17.48■□□□□ 0.39
TSKU-202ENST00000525167 ETFBP38117 255 aa17.48■□□□□ 0.39
TSKU-202ENST00000525167 LSSP48449 732 aa17.48■□□□□ 0.39
TSKU-202ENST00000525167 ERVPABLB-1P60509 514 aa17.48■□□□□ 0.39
TSKU-202ENST00000525167 CARD16Q5EG05 197 aa17.48■□□□□ 0.39
TSKU-202ENST00000525167 ARTNQ5T4W7 220 aa17.48■□□□□ 0.39
TSKU-202ENST00000525167 ZCCHC8Q6NZY4 707 aaKnown RBP17.48■□□□□ 0.39
TSKU-202ENST00000525167 PTAR1Q7Z6K3 402 aaPredicted RBP17.48■□□□□ 0.39
TSKU-202ENST00000525167 PARGQ86W56 976 aa17.48■□□□□ 0.39
TSKU-202ENST00000525167 XYLT1Q86Y38 959 aa17.48■□□□□ 0.39
TSKU-202ENST00000525167 MLKLQ8NB16 471 aa17.48■□□□□ 0.39
TSKU-202ENST00000525167 OR7D4Q8NG98 312 aa17.48■□□□□ 0.39
TSKU-202ENST00000525167 ASB12Q8WXK4 309 aa17.48■□□□□ 0.39
TSKU-202ENST00000525167 RAB7BQ96AH8 199 aa17.48■□□□□ 0.39
TSKU-202ENST00000525167 ISG20Q96AZ6 181 aaKnown RBP17.48■□□□□ 0.39
TSKU-202ENST00000525167 BMFQ96LC9 184 aa17.48■□□□□ 0.39
TSKU-202ENST00000525167 LENG8Q96PV6 779 aaPredicted RBP17.48■□□□□ 0.39
TSKU-202ENST00000525167 LGMNQ99538 433 aa17.48■□□□□ 0.39
TSKU-202ENST00000525167 ATP13A1Q9HD20 1204 aa17.48■□□□□ 0.39
TSKU-202ENST00000525167 DNAJC28Q9NX36 388 aa17.48■□□□□ 0.39
TSKU-202ENST00000525167 PCDHB1Q9Y5F3 818 aa17.48■□□□□ 0.39
TSKU-202ENST00000525167 FADS3Q9Y5Q0 445 aa17.48■□□□□ 0.39
TSKU-202ENST00000525167 SNX10Q9Y5X0 201 aa17.48■□□□□ 0.39
TSKU-202ENST00000525167 LY6G6EA0A0G2JKS1 128 aa17.47■□□□□ 0.39
TSKU-202ENST00000525167 CAPN8A6NHC0 703 aa17.47■□□□□ 0.39
TSKU-202ENST00000525167 RNF103O00237 685 aa17.47■□□□□ 0.39
TSKU-202ENST00000525167 TSPAN6O43657 245 aa17.47■□□□□ 0.39
TSKU-202ENST00000525167 C1QL1O75973 258 aa17.47■□□□□ 0.39
TSKU-202ENST00000525167 CYP11B1P15538 503 aa17.47■□□□□ 0.39
TSKU-202ENST00000525167 CCNHP51946 323 aaPredicted RBP17.47■□□□□ 0.39
TSKU-202ENST00000525167 GEMIN4P57678 1058 aaKnown RBP17.47■□□□□ 0.39
TSKU-202ENST00000525167 GNA12Q03113 381 aa17.47■□□□□ 0.39
TSKU-202ENST00000525167 CCDC173Q0VFZ6 552 aa17.47■□□□□ 0.39
TSKU-202ENST00000525167 FZD2Q14332 565 aa17.47■□□□□ 0.39
TSKU-202ENST00000525167 TPD52L1Q16890 204 aaPredicted RBP17.47■□□□□ 0.39
TSKU-202ENST00000525167 BROXQ5VW32 411 aa17.47■□□□□ 0.39
TSKU-202ENST00000525167 IGF2-ASQ6U949 168 aa17.47■□□□□ 0.39
TSKU-202ENST00000525167 ZNF548Q8NEK5 533 aaPredicted RBP17.47■□□□□ 0.39
TSKU-202ENST00000525167 SPON2Q9BUD6 331 aa17.47■□□□□ 0.39
TSKU-202ENST00000525167 ABCG4Q9H172 646 aa17.47■□□□□ 0.39
TSKU-202ENST00000525167 NDST4Q9H3R1 872 aa17.47■□□□□ 0.39
TSKU-202ENST00000525167 POLR1BQ9H9Y6 1135 aa17.47■□□□□ 0.39
TSKU-202ENST00000525167 U3KQA8 63 aa17.47■□□□□ 0.39
TSKU-202ENST00000525167 SHROOM3Q8TF72 1996 aa17.47■□□□□ 0.39
TSKU-202ENST00000525167 HELZ2Q9BYK8 2649 aaKnown RBP17.47■□□□□ 0.39
TSKU-202ENST00000525167 POM121BA6NF01 834 aa17.46■□□□□ 0.39
TSKU-202ENST00000525167 FPGTO14772 594 aa17.46■□□□□ 0.39
TSKU-202ENST00000525167 SRGAP2O75044 1071 aa17.46■□□□□ 0.39
TSKU-202ENST00000525167 CSO75390 466 aaKnown RBP17.46■□□□□ 0.39
TSKU-202ENST00000525167 PAK4O96013 591 aaPredicted RBP17.46■□□□□ 0.39
TSKU-202ENST00000525167 PNMA6AP0CW24 399 aaPredicted RBP17.46■□□□□ 0.39
TSKU-202ENST00000525167 FLT3P36888 993 aa17.46■□□□□ 0.39
TSKU-202ENST00000525167 TMPRSS3P57727 454 aa17.46■□□□□ 0.39
TSKU-202ENST00000525167 GABREP78334 506 aa17.46■□□□□ 0.39
TSKU-202ENST00000525167 ARF5P84085 180 aa17.46■□□□□ 0.39
TSKU-202ENST00000525167 NRG1Q02297 640 aaPredicted RBP17.46■□□□□ 0.39
TSKU-202ENST00000525167 SGCGQ13326 291 aa17.46■□□□□ 0.39
TSKU-202ENST00000525167 MAPK8IP2Q13387 824 aaPredicted RBP17.46■□□□□ 0.39
TSKU-202ENST00000525167 FGL2Q14314 439 aa17.46■□□□□ 0.39
TSKU-202ENST00000525167 DRAP1Q14919 205 aaPredicted RBP17.46■□□□□ 0.39
TSKU-202ENST00000525167 PARS2Q7L3T8 475 aaKnown RBP17.46■□□□□ 0.39
TSKU-202ENST00000525167 DENND6BQ8NEG7 585 aa17.46■□□□□ 0.39
TSKU-202ENST00000525167 TPCN2Q8NHX9 752 aa17.46■□□□□ 0.39
TSKU-202ENST00000525167 ARHGEF26Q96DR7 871 aa17.46■□□□□ 0.39
TSKU-202ENST00000525167 C1QTNF2Q9BXJ5 285 aa17.46■□□□□ 0.39
TSKU-202ENST00000525167 SALL4Q9UJQ4 1053 aa17.46■□□□□ 0.39
TSKU-202ENST00000525167 TMEM59LQ9UK28 342 aa17.46■□□□□ 0.39
TSKU-202ENST00000525167 DOCK4Q8N1I0 1966 aa17.46■□□□□ 0.39
TSKU-202ENST00000525167 ERVH48-1M5A8F1 160 aa17.45■□□□□ 0.38
TSKU-202ENST00000525167 TPP1O14773 563 aa17.45■□□□□ 0.38
TSKU-202ENST00000525167 USP12O75317 370 aa17.45■□□□□ 0.38
TSKU-202ENST00000525167 ENDOD1O94919 500 aa17.45■□□□□ 0.38
TSKU-202ENST00000525167 PRB1P04280 392 aa17.45■□□□□ 0.38
TSKU-202ENST00000525167 MPOP05164 745 aa17.45■□□□□ 0.38
TSKU-202ENST00000525167 CXADRP78310 365 aa17.45■□□□□ 0.38
TSKU-202ENST00000525167 RAPGEF1Q13905 1077 aa17.45■□□□□ 0.38
TSKU-202ENST00000525167 VWA3BQ502W6 1294 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms