RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 FAM160B2Q86V87 743 aa4.17□□□□□ -1.74
SKP1-212ENST00000523966 ETNPPLQ8TBG4 499 aa4.17□□□□□ -1.74
SKP1-212ENST00000523966 HDAC7Q8WUI4 952 aa4.17□□□□□ -1.74
SKP1-212ENST00000523966 KLHL29Q96CT2 875 aa4.17□□□□□ -1.74
SKP1-212ENST00000523966 WDR83Q9BRX9 315 aaKnown RBP4.17□□□□□ -1.74
SKP1-212ENST00000523966 TRMOQ9BU70 441 aa4.17□□□□□ -1.74
SKP1-212ENST00000523966 KRTAP9-8Q9BYQ0 159 aa4.17□□□□□ -1.74
SKP1-212ENST00000523966 FRMD8Q9BZ67 464 aaPredicted RBP4.17□□□□□ -1.74
SKP1-212ENST00000523966 TASP1Q9H6P5 420 aa4.17□□□□□ -1.74
SKP1-212ENST00000523966 SEMA4BQ9NPR2 832 aaPredicted RBP4.17□□□□□ -1.74
SKP1-212ENST00000523966 THSD1Q9NS62 852 aa4.17□□□□□ -1.74
SKP1-212ENST00000523966 ZDHHC7Q9NXF8 308 aa4.17□□□□□ -1.74
SKP1-212ENST00000523966 MST1RQ04912 1400 aa4.17□□□□□ -1.74
SKP1-212ENST00000523966 KAT6AQ92794 2004 aa4.17□□□□□ -1.74
SKP1-212ENST00000523966 TRBV5-3A0A0A0MS03 114 aa4.16□□□□□ -1.74
SKP1-212ENST00000523966 PABPN1LA6NDY0 278 aaKnown RBP4.16□□□□□ -1.74
SKP1-212ENST00000523966 C17orf100A8MU93 164 aa4.16□□□□□ -1.74
SKP1-212ENST00000523966 SLC25A17O43808 307 aa4.16□□□□□ -1.74
SKP1-212ENST00000523966 CCNDBP1O95273 360 aa4.16□□□□□ -1.74
SKP1-212ENST00000523966 GALTP07902 379 aa4.16□□□□□ -1.74
SKP1-212ENST00000523966 MMP3P08254 477 aa4.16□□□□□ -1.74
SKP1-212ENST00000523966 PCNAP12004 261 aa4.16□□□□□ -1.74
SKP1-212ENST00000523966 PTGER1P34995 402 aa4.16□□□□□ -1.74
SKP1-212ENST00000523966 ARL3P36405 182 aa4.16□□□□□ -1.74
SKP1-212ENST00000523966 CLNS1AP54105 237 aaKnown RBP4.16□□□□□ -1.74
SKP1-212ENST00000523966 RARSP54136 660 aaKnown RBP4.16□□□□□ -1.74
SKP1-212ENST00000523966 ARF3P61204 181 aaPredicted RBP4.16□□□□□ -1.74
SKP1-212ENST00000523966 ARF1P84077 181 aaKnown RBP4.16□□□□□ -1.74
SKP1-212ENST00000523966 CYP4A11Q02928 519 aa4.16□□□□□ -1.74
SKP1-212ENST00000523966 GOLGA8DPQ0D2H9 430 aa4.16□□□□□ -1.74
SKP1-212ENST00000523966 PTP4A2Q12974 167 aa4.16□□□□□ -1.74
SKP1-212ENST00000523966 RPE65Q16518 533 aa4.16□□□□□ -1.74
SKP1-212ENST00000523966 SMTNL2Q2TAL5 461 aa4.16□□□□□ -1.74
SKP1-212ENST00000523966 SYTL3Q4VX76 610 aa4.16□□□□□ -1.74
SKP1-212ENST00000523966 MTX3Q5HYI7 312 aa4.16□□□□□ -1.74
SKP1-212ENST00000523966 UBAP2Q5T6F2 1119 aaKnown RBP4.16□□□□□ -1.74
SKP1-212ENST00000523966 INO80CQ6PI98 192 aaPredicted RBP4.16□□□□□ -1.74
SKP1-212ENST00000523966 MOB3CQ70IA8 216 aa4.16□□□□□ -1.74
SKP1-212ENST00000523966 H1FNTQ75WM6 255 aaPredicted RBP4.16□□□□□ -1.74
SKP1-212ENST00000523966 SERPINA11Q86U17 422 aa4.16□□□□□ -1.74
SKP1-212ENST00000523966 GPAT4Q86UL3 456 aa4.16□□□□□ -1.74
SKP1-212ENST00000523966 LURAP1LQ8IV03 231 aa4.16□□□□□ -1.74
SKP1-212ENST00000523966 FAM217AQ8IXS0 508 aa4.16□□□□□ -1.74
SKP1-212ENST00000523966 LRRC57Q8N9N7 239 aa4.16□□□□□ -1.74
SKP1-212ENST00000523966 ZMIZ2Q8NF64 920 aa4.16□□□□□ -1.74
SKP1-212ENST00000523966 RASSF8Q8NHQ8 419 aa4.16□□□□□ -1.74
SKP1-212ENST00000523966 ATOH1Q92858 354 aaPredicted RBP4.16□□□□□ -1.74
SKP1-212ENST00000523966 SMARCE1Q969G3 411 aa4.16□□□□□ -1.74
SKP1-212ENST00000523966 OTULINQ96BN8 352 aa4.16□□□□□ -1.74
SKP1-212ENST00000523966 KLHL15Q96M94 604 aa4.16□□□□□ -1.74
SKP1-212ENST00000523966 CXorf56Q9H5V9 222 aa4.16□□□□□ -1.74
SKP1-212ENST00000523966 PNRC2Q9NPJ4 139 aaKnown RBP4.16□□□□□ -1.74
SKP1-212ENST00000523966 SNTG1Q9NSN8 517 aa4.16□□□□□ -1.74
SKP1-212ENST00000523966 DIAPH3Q9NSV4 1193 aa4.16□□□□□ -1.74
SKP1-212ENST00000523966 DECR2Q9NUI1 292 aa4.16□□□□□ -1.74
SKP1-212ENST00000523966 KIAA1456Q9P272 454 aa4.16□□□□□ -1.74
SKP1-212ENST00000523966 HDAC6Q9UBN7 1215 aa4.16□□□□□ -1.74
SKP1-212ENST00000523966 NAALADL1Q9UQQ1 740 aa4.16□□□□□ -1.74
SKP1-212ENST00000523966 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.16□□□□□ -1.74
SKP1-212ENST00000523966 ZMYM2Q9UBW7 1377 aa4.15□□□□□ -1.74
SKP1-212ENST00000523966 WIPF3A6NGB9 483 aa4.15□□□□□ -1.75
SKP1-212ENST00000523966 DDTLA6NHG4 134 aaPredicted RBP4.15□□□□□ -1.75
SKP1-212ENST00000523966 LRRC53A6NM62 1247 aa4.15□□□□□ -1.75
SKP1-212ENST00000523966 EIF3CLB5ME19 914 aaKnown RBP4.15□□□□□ -1.75
SKP1-212ENST00000523966 E5RJQ4 531 aa4.15□□□□□ -1.75
SKP1-212ENST00000523966 F5H0A9 414 aaPredicted RBP4.15□□□□□ -1.75
SKP1-212ENST00000523966 MASP2O00187 686 aa4.15□□□□□ -1.75
SKP1-212ENST00000523966 ADAM10O14672 748 aa4.15□□□□□ -1.75
SKP1-212ENST00000523966 TLR2O60603 784 aa4.15□□□□□ -1.75
SKP1-212ENST00000523966 ZBED4O75132 1171 aa4.15□□□□□ -1.75
SKP1-212ENST00000523966 TACC1O75410 805 aa4.15□□□□□ -1.75
SKP1-212ENST00000523966 TIPRLO75663 272 aa4.15□□□□□ -1.75
SKP1-212ENST00000523966 MTA2O94776 668 aa4.15□□□□□ -1.75
SKP1-212ENST00000523966 DDX58O95786 925 aaKnown RBP4.15□□□□□ -1.75
SKP1-212ENST00000523966 WNT1P04628 370 aa4.15□□□□□ -1.75
SKP1-212ENST00000523966 CYP19A1P11511 503 aaPredicted RBP4.15□□□□□ -1.75
SKP1-212ENST00000523966 ENO3P13929 434 aaPredicted RBP4.15□□□□□ -1.75
SKP1-212ENST00000523966 ZNF8P17098 575 aaPredicted RBP4.15□□□□□ -1.75
SKP1-212ENST00000523966 PTPN2P17706 415 aa4.15□□□□□ -1.75
SKP1-212ENST00000523966 PSMA4P25789 261 aaKnown RBP4.15□□□□□ -1.75
SKP1-212ENST00000523966 HOXD9P28356 352 aaPredicted RBP4.15□□□□□ -1.75
SKP1-212ENST00000523966 EPHA8P29322 1005 aaPredicted RBP4.15□□□□□ -1.75
SKP1-212ENST00000523966 KCNJ4P48050 445 aa4.15□□□□□ -1.75
SKP1-212ENST00000523966 EIF5P55010 431 aaKnown RBP4.15□□□□□ -1.75
SKP1-212ENST00000523966 NANOS3P60323 173 aaKnown RBP4.15□□□□□ -1.75
SKP1-212ENST00000523966 SIM2Q14190 667 aaPredicted RBP4.15□□□□□ -1.75
SKP1-212ENST00000523966 PPP2R5BQ15173 497 aa4.15□□□□□ -1.75
SKP1-212ENST00000523966 GSTA3Q16772 222 aa4.15□□□□□ -1.75
SKP1-212ENST00000523966 HIST2H2ACQ16777 129 aaPredicted RBP4.15□□□□□ -1.75
SKP1-212ENST00000523966 ME3Q16798 604 aa4.15□□□□□ -1.75
SKP1-212ENST00000523966 SLC9B1Q4ZJI4 515 aa4.15□□□□□ -1.75
SKP1-212ENST00000523966 PIK3CD-AS1Q5SR53 167 aa4.15□□□□□ -1.75
SKP1-212ENST00000523966 MANEAQ5SRI9 462 aa4.15□□□□□ -1.75
SKP1-212ENST00000523966 SERTAD4-AS1Q5TG53 156 aa4.15□□□□□ -1.75
SKP1-212ENST00000523966 MORN5Q5VZ52 161 aa4.15□□□□□ -1.75
SKP1-212ENST00000523966 SHC4Q6S5L8 630 aa4.15□□□□□ -1.75
SKP1-212ENST00000523966 C17orf99Q6UX52 265 aa4.15□□□□□ -1.75
SKP1-212ENST00000523966 C1orf122Q6ZSJ8 110 aa4.15□□□□□ -1.75
SKP1-212ENST00000523966 TMTC3Q6ZXV5 915 aa4.15□□□□□ -1.75
SKP1-212ENST00000523966 TRAPPC11Q7Z392 1133 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 571.3 ms