RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 CLMNQ96JQ2 1002 aa5.29□□□□□ -1.56
SKP1-211ENST00000523359 SLC32A1Q9H598 525 aa5.29□□□□□ -1.56
SKP1-211ENST00000523359 CXorf56Q9H5V9 222 aa5.29□□□□□ -1.56
SKP1-211ENST00000523359 EPHX3Q9H6B9 360 aa5.29□□□□□ -1.56
SKP1-211ENST00000523359 ACTR5Q9H9F9 607 aaPredicted RBP5.29□□□□□ -1.56
SKP1-211ENST00000523359 JMJD4Q9H9V9 463 aa5.29□□□□□ -1.56
SKP1-211ENST00000523359 PREBQ9HCU5 417 aa5.29□□□□□ -1.56
SKP1-211ENST00000523359 THSD1Q9NS62 852 aa5.29□□□□□ -1.56
SKP1-211ENST00000523359 NLKQ9UBE8 527 aa5.29□□□□□ -1.56
SKP1-211ENST00000523359 AGO2Q9UKV8 859 aaKnown RBP5.29□□□□□ -1.56
SKP1-211ENST00000523359 CYP46A1Q9Y6A2 500 aa5.29□□□□□ -1.56
SKP1-211ENST00000523359 TNPO2O14787 897 aaKnown RBP5.28□□□□□ -1.56
SKP1-211ENST00000523359 ADAP00813 363 aa5.28□□□□□ -1.56
SKP1-211ENST00000523359 LCKP06239 509 aa5.28□□□□□ -1.56
SKP1-211ENST00000523359 CHRM4P08173 479 aa5.28□□□□□ -1.56
SKP1-211ENST00000523359 ELF1P32519 619 aa5.28□□□□□ -1.56
SKP1-211ENST00000523359 MPP1Q00013 466 aa5.28□□□□□ -1.56
SKP1-211ENST00000523359 TRIP6Q15654 476 aaKnown RBP5.28□□□□□ -1.56
SKP1-211ENST00000523359 SMTNL2Q2TAL5 461 aa5.28□□□□□ -1.56
SKP1-211ENST00000523359 SPECC1Q5M775 1068 aa5.28□□□□□ -1.56
SKP1-211ENST00000523359 SLC10A5Q5PT55 438 aa5.28□□□□□ -1.56
SKP1-211ENST00000523359 FAM69AQ5T7M9 428 aa5.28□□□□□ -1.56
SKP1-211ENST00000523359 NAA35Q5VZE5 725 aa5.28□□□□□ -1.56
SKP1-211ENST00000523359 TMEM268Q5VZI3 342 aa5.28□□□□□ -1.56
SKP1-211ENST00000523359 ZNF626Q68DY1 528 aa5.28□□□□□ -1.56
SKP1-211ENST00000523359 ACAD10Q6JQN1 1059 aa5.28□□□□□ -1.56
SKP1-211ENST00000523359 MAATS1Q7Z4T9 603 aa5.28□□□□□ -1.56
SKP1-211ENST00000523359 IGFN1Q86VF2 1251 aa5.28□□□□□ -1.56
SKP1-211ENST00000523359 ANKRD13BQ86YJ7 626 aa5.28□□□□□ -1.56
SKP1-211ENST00000523359 NDUFAF2Q8N183 169 aa5.28□□□□□ -1.56
SKP1-211ENST00000523359 OTUD6BQ8N6M0 293 aa5.28□□□□□ -1.56
SKP1-211ENST00000523359 TSPYL6Q8N831 410 aa5.28□□□□□ -1.56
SKP1-211ENST00000523359 ZNF366Q8N895 744 aa5.28□□□□□ -1.56
SKP1-211ENST00000523359 PCYOX1LQ8NBM8 494 aa5.28□□□□□ -1.56
SKP1-211ENST00000523359 SLC44A5Q8NCS7 719 aa5.28□□□□□ -1.56
SKP1-211ENST00000523359 DNAAF1Q8NEP3 725 aa5.28□□□□□ -1.56
SKP1-211ENST00000523359 CMASQ8NFW8 434 aaPredicted RBP5.28□□□□□ -1.56
SKP1-211ENST00000523359 TNIP2Q8NFZ5 429 aa5.28□□□□□ -1.56
SKP1-211ENST00000523359 TEFMQ96QE5 360 aaKnown RBP5.28□□□□□ -1.56
SKP1-211ENST00000523359 SPAG4Q9NPE6 437 aa5.28□□□□□ -1.56
SKP1-211ENST00000523359 SH3GLB2Q9NR46 395 aa5.28□□□□□ -1.56
SKP1-211ENST00000523359 SMYD2Q9NRG4 433 aa5.28□□□□□ -1.56
SKP1-211ENST00000523359 CDH22Q9UJ99 828 aa5.28□□□□□ -1.56
SKP1-211ENST00000523359 TTLL3Q9Y4R7 772 aa5.28□□□□□ -1.56
SKP1-211ENST00000523359 SYNRGQ9UMZ2 1314 aa5.27□□□□□ -1.57
SKP1-211ENST00000523359 TRBV5-7A0A0A0MS05 114 aa5.27□□□□□ -1.57
SKP1-211ENST00000523359 A0A1W2PPC1 479 aa5.27□□□□□ -1.57
SKP1-211ENST00000523359 FAM170AA1A519 330 aa5.27□□□□□ -1.57
SKP1-211ENST00000523359 PABPN1LA6NDY0 278 aaKnown RBP5.27□□□□□ -1.57
SKP1-211ENST00000523359 TEX22C9J3V5 150 aa5.27□□□□□ -1.57
SKP1-211ENST00000523359 CEP104O60308 925 aa5.27□□□□□ -1.57
SKP1-211ENST00000523359 CD4P01730 458 aa5.27□□□□□ -1.57
SKP1-211ENST00000523359 URODP06132 367 aa5.27□□□□□ -1.57
SKP1-211ENST00000523359 SLC16A2P36021 539 aa5.27□□□□□ -1.57
SKP1-211ENST00000523359 PAFAH1B1P43034 410 aa5.27□□□□□ -1.57
SKP1-211ENST00000523359 MMP14P50281 582 aa5.27□□□□□ -1.57
SKP1-211ENST00000523359 KRT83P78385 493 aa5.27□□□□□ -1.57
SKP1-211ENST00000523359 ROR1Q01973 937 aa5.27□□□□□ -1.57
SKP1-211ENST00000523359 MST1RQ04912 1400 aa5.27□□□□□ -1.57
SKP1-211ENST00000523359 WASHC5Q12768 1159 aa5.27□□□□□ -1.57
SKP1-211ENST00000523359 CAMK1Q14012 370 aa5.27□□□□□ -1.57
SKP1-211ENST00000523359 GLIPR1L2Q4G1C9 344 aa5.27□□□□□ -1.57
SKP1-211ENST00000523359 SYTL3Q4VX76 610 aa5.27□□□□□ -1.57
SKP1-211ENST00000523359 ZNF766Q5HY98 468 aa5.27□□□□□ -1.57
SKP1-211ENST00000523359 C6orf10Q5SRN2 563 aa5.27□□□□□ -1.57
SKP1-211ENST00000523359 HMBOX1Q6NT76 420 aa5.27□□□□□ -1.57
SKP1-211ENST00000523359 WDR5BQ86VZ2 330 aa5.27□□□□□ -1.57
SKP1-211ENST00000523359 LMNTD2Q8IXW0 634 aa5.27□□□□□ -1.57
SKP1-211ENST00000523359 SMG7Q92540 1137 aaKnown RBP5.27□□□□□ -1.57
SKP1-211ENST00000523359 MYCBPQ99417 103 aaPredicted RBP5.27□□□□□ -1.57
SKP1-211ENST00000523359 MPHOSPH8Q99549 860 aa5.27□□□□□ -1.57
SKP1-211ENST00000523359 UNC45AQ9H3U1 944 aa5.27□□□□□ -1.57
SKP1-211ENST00000523359 BEX4Q9NWD9 120 aaPredicted RBP5.27□□□□□ -1.57
SKP1-211ENST00000523359 TRNAU1APQ9NX07 287 aaKnown RBP5.27□□□□□ -1.57
SKP1-211ENST00000523359 OSGIN2Q9Y236 505 aa5.27□□□□□ -1.57
SKP1-211ENST00000523359 CNPY2Q9Y2B0 182 aa5.27□□□□□ -1.57
SKP1-211ENST00000523359 A0A0G2JK05 382 aa5.26□□□□□ -1.57
SKP1-211ENST00000523359 GOLGA6L10A0A0M3HER8 536 aa5.26□□□□□ -1.57
SKP1-211ENST00000523359 A6NNC1 897 aa5.26□□□□□ -1.57
SKP1-211ENST00000523359 TSPAN4O14817 238 aa5.26□□□□□ -1.57
SKP1-211ENST00000523359 CNOT3O75175 753 aaKnown RBP5.26□□□□□ -1.57
SKP1-211ENST00000523359 TMCC1O94876 653 aa5.26□□□□□ -1.57
SKP1-211ENST00000523359 MBD4O95243 580 aa5.26□□□□□ -1.57
SKP1-211ENST00000523359 SERPINC1P01008 464 aa5.26□□□□□ -1.57
SKP1-211ENST00000523359 IL1AP01583 271 aa5.26□□□□□ -1.57
SKP1-211ENST00000523359 CHRNB1P11230 501 aa5.26□□□□□ -1.57
SKP1-211ENST00000523359 CAPN3P20807 821 aa5.26□□□□□ -1.57
SKP1-211ENST00000523359 MMP13P45452 471 aa5.26□□□□□ -1.57
SKP1-211ENST00000523359 CCT4P50991 539 aaKnown RBP5.26□□□□□ -1.57
SKP1-211ENST00000523359 CASP6P55212 293 aa5.26□□□□□ -1.57
SKP1-211ENST00000523359 SSBP2P81877 361 aaPredicted RBP5.26□□□□□ -1.57
SKP1-211ENST00000523359 GAD2Q05329 585 aa5.26□□□□□ -1.57
SKP1-211ENST00000523359 MTX1Q13505 466 aa5.26□□□□□ -1.57
SKP1-211ENST00000523359 RPE65Q16518 533 aa5.26□□□□□ -1.57
SKP1-211ENST00000523359 ZNF667Q5HYK9 610 aa5.26□□□□□ -1.57
SKP1-211ENST00000523359 PIK3CD-AS1Q5SR53 167 aa5.26□□□□□ -1.57
SKP1-211ENST00000523359 C10orf25Q5T742 122 aa5.26□□□□□ -1.57
SKP1-211ENST00000523359 MORN5Q5VZ52 161 aa5.26□□□□□ -1.57
SKP1-211ENST00000523359 H1FNTQ75WM6 255 aaPredicted RBP5.26□□□□□ -1.57
SKP1-211ENST00000523359 RSRC2Q7L4I2 434 aaKnown RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms