RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 ACADVLP49748 655 aa6.68□□□□□ -1.34
VPS13B-211ENST00000522802 CCT8P50990 548 aa6.68□□□□□ -1.34
VPS13B-211ENST00000522802 TPMTP51580 245 aa6.68□□□□□ -1.34
VPS13B-211ENST00000522802 AFF3P51826 1226 aaKnown RBP6.68□□□□□ -1.34
VPS13B-211ENST00000522802 CACNA2D1P54289 1103 aa6.68□□□□□ -1.34
VPS13B-211ENST00000522802 NCKAP1LP55160 1127 aa6.68□□□□□ -1.34
VPS13B-211ENST00000522802 TMPRSS3P57727 454 aa6.68□□□□□ -1.34
VPS13B-211ENST00000522802 IRX6P78412 446 aaPredicted RBP6.68□□□□□ -1.34
VPS13B-211ENST00000522802 RHDQ02161 417 aa6.68□□□□□ -1.34
VPS13B-211ENST00000522802 KYAT1Q16773 422 aa6.68□□□□□ -1.34
VPS13B-211ENST00000522802 TBC1D25Q3MII6 688 aa6.68□□□□□ -1.34
VPS13B-211ENST00000522802 PREPLQ4J6C6 727 aaPredicted RBP6.68□□□□□ -1.34
VPS13B-211ENST00000522802 ZNF648Q5T619 568 aaPredicted RBP6.68□□□□□ -1.34
VPS13B-211ENST00000522802 BTBD8Q5XKL5 378 aa6.68□□□□□ -1.34
VPS13B-211ENST00000522802 GRAMD4Q6IC98 578 aa6.68□□□□□ -1.34
VPS13B-211ENST00000522802 FAM124AQ86V42 546 aa6.68□□□□□ -1.34
VPS13B-211ENST00000522802 GATAD2AQ86YP4 633 aa6.68□□□□□ -1.34
VPS13B-211ENST00000522802 ZC3H7AQ8IWR0 971 aaKnown RBP6.68□□□□□ -1.34
VPS13B-211ENST00000522802 ADGRF2Q8IZF7 708 aa6.68□□□□□ -1.34
VPS13B-211ENST00000522802 KIAA1958Q8N8K9 716 aa6.68□□□□□ -1.34
VPS13B-211ENST00000522802 CADM4Q8NFZ8 388 aa6.68□□□□□ -1.34
VPS13B-211ENST00000522802 MZB1Q8WU39 189 aa6.68□□□□□ -1.34
VPS13B-211ENST00000522802 FGF11Q92914 225 aa6.68□□□□□ -1.34
VPS13B-211ENST00000522802 IGSF8Q969P0 613 aa6.68□□□□□ -1.34
VPS13B-211ENST00000522802 FBXW5Q969U6 566 aa6.68□□□□□ -1.34
VPS13B-211ENST00000522802 P2RY11Q96G91 374 aa6.68□□□□□ -1.34
VPS13B-211ENST00000522802 ZNF560Q96MR9 790 aa6.68□□□□□ -1.34
VPS13B-211ENST00000522802 TSPAN18Q96SJ8 248 aa6.68□□□□□ -1.34
VPS13B-211ENST00000522802 LGMNQ99538 433 aa6.68□□□□□ -1.34
VPS13B-211ENST00000522802 ACBD6Q9BR61 282 aa6.68□□□□□ -1.34
VPS13B-211ENST00000522802 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.68□□□□□ -1.34
VPS13B-211ENST00000522802 TTLL2Q9BWV7 592 aa6.68□□□□□ -1.34
VPS13B-211ENST00000522802 TRPM5Q9NZQ8 1165 aa6.68□□□□□ -1.34
VPS13B-211ENST00000522802 LRWD1Q9UFC0 647 aa6.68□□□□□ -1.34
VPS13B-211ENST00000522802 C2CD2Q9Y426 696 aa6.68□□□□□ -1.34
VPS13B-211ENST00000522802 USP9YO00507 2555 aaPredicted RBP6.68□□□□□ -1.34
VPS13B-211ENST00000522802 ANKRD63C9JTQ0 380 aa6.67□□□□□ -1.34
VPS13B-211ENST00000522802 K7ENM7 598 aa6.67□□□□□ -1.34
VPS13B-211ENST00000522802 GSTA4O15217 222 aa6.67□□□□□ -1.34
VPS13B-211ENST00000522802 COCHO43405 550 aa6.67□□□□□ -1.34
VPS13B-211ENST00000522802 CACNG3O60359 315 aa6.67□□□□□ -1.34
VPS13B-211ENST00000522802 IGLV3-19P01714 112 aa6.67□□□□□ -1.34
VPS13B-211ENST00000522802 ITGB3P05106 788 aa6.67□□□□□ -1.34
VPS13B-211ENST00000522802 BDNFP23560 247 aa6.67□□□□□ -1.34
VPS13B-211ENST00000522802 GUCY1B3Q02153 619 aa6.67□□□□□ -1.34
VPS13B-211ENST00000522802 TAF10Q12962 218 aa6.67□□□□□ -1.34
VPS13B-211ENST00000522802 C21orf62-AS1Q17RA5 79 aa6.67□□□□□ -1.34
VPS13B-211ENST00000522802 ABHD17CQ6PCB6 329 aa6.67□□□□□ -1.34
VPS13B-211ENST00000522802 DENND5BQ6ZUT9 1274 aa6.67□□□□□ -1.34
VPS13B-211ENST00000522802 DDX42Q86XP3 938 aaKnown RBP eCLIP6.67□□□□□ -1.34
VPS13B-211ENST00000522802 IGDCC3Q8IVU1 814 aa6.67□□□□□ -1.34
VPS13B-211ENST00000522802 CD302Q8IX05 232 aa6.67□□□□□ -1.34
VPS13B-211ENST00000522802 C4orf32Q8N8J7 132 aa6.67□□□□□ -1.34
VPS13B-211ENST00000522802 NECAB1Q8N987 351 aa6.67□□□□□ -1.34
VPS13B-211ENST00000522802 IGSF22Q8N9C0 903 aa6.67□□□□□ -1.34
VPS13B-211ENST00000522802 UHMK1Q8TAS1 419 aaKnown RBP6.67□□□□□ -1.34
VPS13B-211ENST00000522802 CXorf38Q8TB03 319 aa6.67□□□□□ -1.34
VPS13B-211ENST00000522802 PHOSPHO1Q8TCT1 267 aa6.67□□□□□ -1.34
VPS13B-211ENST00000522802 WASF1Q92558 559 aa6.67□□□□□ -1.34
VPS13B-211ENST00000522802 ALG3Q92685 438 aa6.67□□□□□ -1.34
VPS13B-211ENST00000522802 NINJ1Q92982 152 aa6.67□□□□□ -1.34
VPS13B-211ENST00000522802 MED8Q96G25 268 aa6.67□□□□□ -1.34
VPS13B-211ENST00000522802 WBP1Q96G27 269 aa6.67□□□□□ -1.34
VPS13B-211ENST00000522802 FUBP3Q96I24 572 aaKnown RBP eCLIP6.67□□□□□ -1.34
VPS13B-211ENST00000522802 SPATA17Q96L03 361 aa6.67□□□□□ -1.34
VPS13B-211ENST00000522802 MMTAG2Q9BU76 263 aaKnown RBP6.67□□□□□ -1.34
VPS13B-211ENST00000522802 C6orf106Q9H6K1 298 aaPredicted RBP6.67□□□□□ -1.34
VPS13B-211ENST00000522802 TM9SF3Q9HD45 589 aa6.67□□□□□ -1.34
VPS13B-211ENST00000522802 SPHK2Q9NRA0 654 aa6.67□□□□□ -1.34
VPS13B-211ENST00000522802 PDRG1Q9NUG6 133 aa6.67□□□□□ -1.34
VPS13B-211ENST00000522802 INTS7Q9NVH2 962 aaKnown RBP6.67□□□□□ -1.34
VPS13B-211ENST00000522802 TBC1D14Q9P2M4 693 aa6.67□□□□□ -1.34
VPS13B-211ENST00000522802 DNM3Q9UQ16 869 aa6.67□□□□□ -1.34
VPS13B-211ENST00000522802 ANKRD6Q9Y2G4 727 aa6.67□□□□□ -1.34
VPS13B-211ENST00000522802 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.67□□□□□ -1.34
VPS13B-211ENST00000522802 PCDHGA1Q9Y5H4 931 aa6.67□□□□□ -1.34
VPS13B-211ENST00000522802 STON1Q9Y6Q2 735 aa6.67□□□□□ -1.34
VPS13B-211ENST00000522802 TCRBV5S2A0A599 114 aa6.66□□□□□ -1.34
VPS13B-211ENST00000522802 F8VP50 259 aa6.66□□□□□ -1.34
VPS13B-211ENST00000522802 GABRDO14764 452 aa6.66□□□□□ -1.34
VPS13B-211ENST00000522802 MAFKO60675 156 aa6.66□□□□□ -1.34
VPS13B-211ENST00000522802 HUS1O60921 280 aa6.66□□□□□ -1.34
VPS13B-211ENST00000522802 ASLP04424 464 aa6.66□□□□□ -1.34
VPS13B-211ENST00000522802 TMEM253P0C7T8 217 aa6.66□□□□□ -1.34
VPS13B-211ENST00000522802 PYGMP11217 842 aa6.66□□□□□ -1.34
VPS13B-211ENST00000522802 TYRP14679 529 aa6.66□□□□□ -1.34
VPS13B-211ENST00000522802 LMO2P25791 158 aa6.66□□□□□ -1.34
VPS13B-211ENST00000522802 ADSSP30520 456 aa6.66□□□□□ -1.34
VPS13B-211ENST00000522802 ACTN2P35609 894 aa6.66□□□□□ -1.34
VPS13B-211ENST00000522802 COPAP53621 1224 aa6.66□□□□□ -1.34
VPS13B-211ENST00000522802 SLC12A3P55017 1021 aa6.66□□□□□ -1.34
VPS13B-211ENST00000522802 NOP14P78316 857 aaKnown RBP6.66□□□□□ -1.34
VPS13B-211ENST00000522802 NFKB2Q00653 900 aa6.66□□□□□ -1.34
VPS13B-211ENST00000522802 MYL7Q01449 175 aa6.66□□□□□ -1.34
VPS13B-211ENST00000522802 SHBQ15464 509 aa6.66□□□□□ -1.34
VPS13B-211ENST00000522802 IL17AQ16552 155 aa6.66□□□□□ -1.34
VPS13B-211ENST00000522802 SOWAHAQ2M3V2 549 aa6.66□□□□□ -1.34
VPS13B-211ENST00000522802 INAVAQ3KP66 663 aa6.66□□□□□ -1.34
VPS13B-211ENST00000522802 TTC38Q5R3I4 469 aa6.66□□□□□ -1.34
VPS13B-211ENST00000522802 PRAMEF14Q5SWL7 426 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms