RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 NTAN1Q96AB6 310 aa21.1■□□□□ 0.97
SDCBP-209ENST00000522243 PPP1R16AQ96I34 528 aa21.1■□□□□ 0.97
SDCBP-209ENST00000522243 NAT10Q9H0A0 1025 aaKnown RBP21.1■□□□□ 0.97
SDCBP-209ENST00000522243 ZDHHC6Q9H6R6 413 aa21.1■□□□□ 0.97
SDCBP-209ENST00000522243 TAS2R14Q9NYV8 317 aa21.1■□□□□ 0.97
SDCBP-209ENST00000522243 ZFR2Q9UPR6 939 aaKnown RBP21.1■□□□□ 0.97
SDCBP-209ENST00000522243 TMCO5BA8MYB1 307 aa21.09■□□□□ 0.97
SDCBP-209ENST00000522243 RAMP2O60895 175 aa21.09■□□□□ 0.97
SDCBP-209ENST00000522243 TNFAIP3P21580 790 aa21.09■□□□□ 0.97
SDCBP-209ENST00000522243 ETFBP38117 255 aa21.09■□□□□ 0.97
SDCBP-209ENST00000522243 ZNF284Q2VY69 593 aa21.09■□□□□ 0.97
SDCBP-209ENST00000522243 SEL1L3Q68CR1 1132 aa21.09■□□□□ 0.97
SDCBP-209ENST00000522243 NEK5Q6P3R8 708 aa21.09■□□□□ 0.97
SDCBP-209ENST00000522243 TMPRSS7Q7RTY8 843 aa21.09■□□□□ 0.97
SDCBP-209ENST00000522243 IRF2BP2Q7Z5L9 587 aa21.09■□□□□ 0.97
SDCBP-209ENST00000522243 ZNF354CQ86Y25 554 aa21.09■□□□□ 0.97
SDCBP-209ENST00000522243 MCOLN2Q8IZK6 566 aa21.09■□□□□ 0.97
SDCBP-209ENST00000522243 KLHDC7BQ96G42 594 aa21.09■□□□□ 0.97
SDCBP-209ENST00000522243 CNDP2Q96KP4 475 aaKnown RBP21.09■□□□□ 0.97
SDCBP-209ENST00000522243 HDAC8Q9BY41 377 aa21.09■□□□□ 0.97
SDCBP-209ENST00000522243 MAGEH1Q9H213 219 aa21.09■□□□□ 0.97
SDCBP-209ENST00000522243 ERVMER34-1Q9H9K5 563 aa21.09■□□□□ 0.97
SDCBP-209ENST00000522243 RTN4Q9NQC3 1192 aaKnown RBP21.09■□□□□ 0.97
SDCBP-209ENST00000522243 HECAQ9UBI9 543 aaPredicted RBP21.09■□□□□ 0.97
SDCBP-209ENST00000522243 COL5A1P20908 1838 aaPredicted RBP21.08■□□□□ 0.97
SDCBP-209ENST00000522243 ANKRD62A6NC57 917 aa21.08■□□□□ 0.97
SDCBP-209ENST00000522243 SRRM3A6NNA2 597 aaPredicted RBP21.08■□□□□ 0.97
SDCBP-209ENST00000522243 YKT6O15498 198 aa21.08■□□□□ 0.97
SDCBP-209ENST00000522243 CREB3O43889 395 aa21.08■□□□□ 0.97
SDCBP-209ENST00000522243 MAGEC1O60732 1142 aa21.08■□□□□ 0.97
SDCBP-209ENST00000522243 SDC3O75056 442 aa21.08■□□□□ 0.97
SDCBP-209ENST00000522243 LDOC1O95751 146 aaPredicted RBP21.08■□□□□ 0.97
SDCBP-209ENST00000522243 CCDC172P0C7W6 258 aa21.08■□□□□ 0.97
SDCBP-209ENST00000522243 L1CAMP32004 1257 aa21.08■□□□□ 0.97
SDCBP-209ENST00000522243 NEK3P51956 506 aa21.08■□□□□ 0.97
SDCBP-209ENST00000522243 ZNF143P52747 638 aaPredicted RBP21.08■□□□□ 0.97
SDCBP-209ENST00000522243 DNAJC3Q13217 504 aa21.08■□□□□ 0.97
SDCBP-209ENST00000522243 POLD3Q15054 466 aaPredicted RBP21.08■□□□□ 0.97
SDCBP-209ENST00000522243 EFHC2Q5JST6 749 aa21.08■□□□□ 0.97
SDCBP-209ENST00000522243 CAVIN1Q6NZI2 390 aaKnown RBP21.08■□□□□ 0.97
SDCBP-209ENST00000522243 DCUN1D2Q6PH85 259 aa21.08■□□□□ 0.97
SDCBP-209ENST00000522243 DHRS13Q6UX07 377 aa21.08■□□□□ 0.97
SDCBP-209ENST00000522243 IQCHQ86VS3 1027 aa21.08■□□□□ 0.97
SDCBP-209ENST00000522243 DNAAF5Q86Y56 855 aa21.08■□□□□ 0.97
SDCBP-209ENST00000522243 OXR1Q8N573 874 aa21.08■□□□□ 0.97
SDCBP-209ENST00000522243 TMEM145Q8NBT3 493 aa21.08■□□□□ 0.97
SDCBP-209ENST00000522243 NETO2Q8NC67 525 aa21.08■□□□□ 0.97
SDCBP-209ENST00000522243 BAP1Q92560 729 aa21.08■□□□□ 0.97
SDCBP-209ENST00000522243 HPCAL4Q9UM19 191 aa21.08■□□□□ 0.97
SDCBP-209ENST00000522243 USP24Q9UPU5 2620 aa21.08■□□□□ 0.96
SDCBP-209ENST00000522243 FAM149AA5PLN7 773 aa21.07■□□□□ 0.96
SDCBP-209ENST00000522243 LRRC53A6NM62 1247 aa21.07■□□□□ 0.96
SDCBP-209ENST00000522243 SMTNL1A8MU46 457 aa21.07■□□□□ 0.96
SDCBP-209ENST00000522243 ENC1O14682 589 aa21.07■□□□□ 0.96
SDCBP-209ENST00000522243 THEGLP0DJG4 465 aa21.07■□□□□ 0.96
SDCBP-209ENST00000522243 ADRB3P13945 408 aa21.07■□□□□ 0.96
SDCBP-209ENST00000522243 ITGB7P26010 798 aa21.07■□□□□ 0.96
SDCBP-209ENST00000522243 EPHB2P29323 1055 aa21.07■□□□□ 0.96
SDCBP-209ENST00000522243 RXRGP48443 463 aa21.07■□□□□ 0.96
SDCBP-209ENST00000522243 CLDN2P57739 230 aa21.07■□□□□ 0.96
SDCBP-209ENST00000522243 OGDHQ02218 1023 aa21.07■□□□□ 0.96
SDCBP-209ENST00000522243 OVGP1Q12889 678 aa21.07■□□□□ 0.96
SDCBP-209ENST00000522243 MAPK8IP2Q13387 824 aaPredicted RBP21.07■□□□□ 0.96
SDCBP-209ENST00000522243 PPP1R15BQ5SWA1 713 aa21.07■□□□□ 0.96
SDCBP-209ENST00000522243 FBXL19Q6PCT2 694 aa21.07■□□□□ 0.96
SDCBP-209ENST00000522243 PARS2Q7L3T8 475 aaKnown RBP21.07■□□□□ 0.96
SDCBP-209ENST00000522243 BPIFA3Q9BQP9 254 aa21.07■□□□□ 0.96
SDCBP-209ENST00000522243 RETREG1Q9H6L5 497 aa21.07■□□□□ 0.96
SDCBP-209ENST00000522243 CAAP1Q9H8G2 361 aa21.07■□□□□ 0.96
SDCBP-209ENST00000522243 RALYQ9UKM9 306 aaKnown RBP21.07■□□□□ 0.96
SDCBP-209ENST00000522243 FZD10Q9ULW2 581 aa21.07■□□□□ 0.96
SDCBP-209ENST00000522243 TRPM6Q9BX84 2022 aa21.06■□□□□ 0.96
SDCBP-209ENST00000522243 TAF4O00268 1085 aa21.06■□□□□ 0.96
SDCBP-209ENST00000522243 ATMINO43313 823 aaPredicted RBP21.06■□□□□ 0.96
SDCBP-209ENST00000522243 KDELR3O43731 214 aa21.06■□□□□ 0.96
SDCBP-209ENST00000522243 HNRNPA2B1P22626 353 aaKnown RBP21.06■□□□□ 0.96
SDCBP-209ENST00000522243 AKT2P31751 481 aa21.06■□□□□ 0.96
SDCBP-209ENST00000522243 RTL3Q8N8U3 475 aaKnown RBP21.06■□□□□ 0.96
SDCBP-209ENST00000522243 ISG20Q96AZ6 181 aaKnown RBP21.06■□□□□ 0.96
SDCBP-209ENST00000522243 CNPY3Q9BT09 278 aa21.06■□□□□ 0.96
SDCBP-209ENST00000522243 SYT11Q9BT88 431 aa21.06■□□□□ 0.96
SDCBP-209ENST00000522243 KLC2Q9H0B6 622 aa21.06■□□□□ 0.96
SDCBP-209ENST00000522243 NOL6Q9H6R4 1146 aaKnown RBP21.06■□□□□ 0.96
SDCBP-209ENST00000522243 FADS3Q9Y5Q0 445 aa21.06■□□□□ 0.96
SDCBP-209ENST00000522243 TDRD6O60522 2096 aaKnown RBP21.06■□□□□ 0.96
SDCBP-209ENST00000522243 FRYQ5TBA9 3013 aa21.05■□□□□ 0.96
SDCBP-209ENST00000522243 KRIT1O00522 736 aa21.05■□□□□ 0.96
SDCBP-209ENST00000522243 BUB1O43683 1085 aa21.05■□□□□ 0.96
SDCBP-209ENST00000522243 CAPNS1P04632 268 aa21.05■□□□□ 0.96
SDCBP-209ENST00000522243 ZNF165P49910 485 aa21.05■□□□□ 0.96
SDCBP-209ENST00000522243 CLDN6P56747 220 aa21.05■□□□□ 0.96
SDCBP-209ENST00000522243 GEMIN4P57678 1058 aaKnown RBP21.05■□□□□ 0.96
SDCBP-209ENST00000522243 FGL2Q14314 439 aa21.05■□□□□ 0.96
SDCBP-209ENST00000522243 ASIC2Q16515 512 aa21.05■□□□□ 0.96
SDCBP-209ENST00000522243 FILIP1LQ4L180 1135 aa21.05■□□□□ 0.96
SDCBP-209ENST00000522243 ATXN7L2Q5T6C5 722 aaPredicted RBP21.05■□□□□ 0.96
SDCBP-209ENST00000522243 KANSL1Q7Z3B3 1105 aa21.05■□□□□ 0.96
SDCBP-209ENST00000522243 OR13H1Q8NG92 308 aa21.05■□□□□ 0.96
SDCBP-209ENST00000522243 OR2AP1Q8NGE2 309 aa21.05■□□□□ 0.96
SDCBP-209ENST00000522243 MDM1Q8TC05 714 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms