RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 GBA3Q9H227 469 aa15.31■□□□□ 0.04
SREK1-209ENST00000520953 KIAA1522Q9P206 1035 aaPredicted RBP15.31■□□□□ 0.04
SREK1-209ENST00000520953 EPS15L1Q9UBC2 864 aa15.31■□□□□ 0.04
SREK1-209ENST00000520953 GGA2Q9UJY4 613 aa15.31■□□□□ 0.04
SREK1-209ENST00000520953 PLAAQ9Y263 795 aa15.31■□□□□ 0.04
SREK1-209ENST00000520953 FCF1Q9Y324 198 aaKnown RBP15.31■□□□□ 0.04
SREK1-209ENST00000520953 MIA3Q5JRA6 1907 aa15.31■□□□□ 0.04
SREK1-209ENST00000520953 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.31■□□□□ 0.04
SREK1-209ENST00000520953 MMP13P45452 471 aa15.31■□□□□ 0.04
SREK1-209ENST00000520953 SOX9P48436 509 aa15.31■□□□□ 0.04
SREK1-209ENST00000520953 DSC2Q02487 901 aa15.31■□□□□ 0.04
SREK1-209ENST00000520953 HNRNPDQ14103 355 aaKnown RBP15.31■□□□□ 0.04
SREK1-209ENST00000520953 CYTH1Q15438 398 aa15.31■□□□□ 0.04
SREK1-209ENST00000520953 AAK1Q2M2I8 961 aa15.31■□□□□ 0.04
SREK1-209ENST00000520953 MSS51Q4VC12 460 aa15.31■□□□□ 0.04
SREK1-209ENST00000520953 TMC3Q7Z5M5 1100 aa15.31■□□□□ 0.04
SREK1-209ENST00000520953 ADIPOR2Q86V24 386 aa15.31■□□□□ 0.04
SREK1-209ENST00000520953 CCDC25Q86WR0 208 aa15.31■□□□□ 0.04
SREK1-209ENST00000520953 LRRC49Q8IUZ0 686 aa15.31■□□□□ 0.04
SREK1-209ENST00000520953 TEX26Q8N6G2 289 aa15.31■□□□□ 0.04
SREK1-209ENST00000520953 GLOD4Q9HC38 313 aa15.31■□□□□ 0.04
SREK1-209ENST00000520953 UBA2Q9UBT2 640 aaPredicted RBP15.31■□□□□ 0.04
SREK1-209ENST00000520953 ARNTLO00327 626 aa15.3■□□□□ 0.04
SREK1-209ENST00000520953 MTSS1O43312 755 aa15.3■□□□□ 0.04
SREK1-209ENST00000520953 TULP3O75386 442 aa15.3■□□□□ 0.04
SREK1-209ENST00000520953 ADH1CP00326 375 aa15.3■□□□□ 0.04
SREK1-209ENST00000520953 CISD3P0C7P0 127 aa15.3■□□□□ 0.04
SREK1-209ENST00000520953 ITKQ08881 620 aa15.3■□□□□ 0.04
SREK1-209ENST00000520953 SEMA5AQ13591 1074 aa15.3■□□□□ 0.04
SREK1-209ENST00000520953 FNBP1LQ5T0N5 605 aa15.3■□□□□ 0.04
SREK1-209ENST00000520953 TMCO4Q5TGY1 634 aa15.3■□□□□ 0.04
SREK1-209ENST00000520953 ZNF783Q6ZMS7 281 aa15.3■□□□□ 0.04
SREK1-209ENST00000520953 ZNF534Q76KX8 674 aa15.3■□□□□ 0.04
SREK1-209ENST00000520953 ETFBKMTQ8IXQ9 262 aa15.3■□□□□ 0.04
SREK1-209ENST00000520953 PPIL6Q8IXY8 311 aa15.3■□□□□ 0.04
SREK1-209ENST00000520953 AGGF1Q8N302 714 aaeCLIP15.3■□□□□ 0.04
SREK1-209ENST00000520953 DCAF4L2Q8NA75 395 aa15.3■□□□□ 0.04
SREK1-209ENST00000520953 ATP2A3Q93084 1043 aa15.3■□□□□ 0.04
SREK1-209ENST00000520953 HLA-CQ95604 372 aa15.3■□□□□ 0.04
SREK1-209ENST00000520953 RBM15Q96T37 977 aaKnown RBP eCLIP15.3■□□□□ 0.043e-7■■□□□ 13.3
SREK1-209ENST00000520953 FMO2Q99518 471 aa15.3■□□□□ 0.04
SREK1-209ENST00000520953 APOL2Q9BQE5 337 aa15.3■□□□□ 0.04
SREK1-209ENST00000520953 THG1LQ9NWX6 298 aaKnown RBP15.3■□□□□ 0.04
SREK1-209ENST00000520953 IGSF9Q9P2J2 1179 aa15.3■□□□□ 0.04
SREK1-209ENST00000520953 BPTFQ12830 3046 aa15.3■□□□□ 0.04
SREK1-209ENST00000520953 ANHXE9PGG2 379 aa15.29■□□□□ 0.04
SREK1-209ENST00000520953 HOXC11O43248 304 aaPredicted RBP15.29■□□□□ 0.04
SREK1-209ENST00000520953 CACNG3O60359 315 aa15.29■□□□□ 0.04
SREK1-209ENST00000520953 ECI2O75521 394 aa15.29■□□□□ 0.04
SREK1-209ENST00000520953 TMCC1O94876 653 aa15.29■□□□□ 0.04
SREK1-209ENST00000520953 NFATC1O95644 943 aa15.29■□□□□ 0.04
SREK1-209ENST00000520953 ASGR2P07307 311 aa15.29■□□□□ 0.04
SREK1-209ENST00000520953 PABPC1P11940 636 aaKnown RBP15.29■□□□□ 0.04
SREK1-209ENST00000520953 KDSRQ06136 332 aa15.29■□□□□ 0.04
SREK1-209ENST00000520953 FASTKD3Q14CZ7 662 aaKnown RBP15.29■□□□□ 0.04
SREK1-209ENST00000520953 PARP6Q2NL67 630 aa15.29■□□□□ 0.04
SREK1-209ENST00000520953 PRPF39Q86UA1 669 aaKnown RBP15.29■□□□□ 0.04
SREK1-209ENST00000520953 YAF2Q8IY57 180 aa15.29■□□□□ 0.04
SREK1-209ENST00000520953 CYB5D2Q8WUJ1 264 aa15.29■□□□□ 0.04
SREK1-209ENST00000520953 FERMT1Q9BQL6 677 aa15.29■□□□□ 0.04
SREK1-209ENST00000520953 LIMD1Q9UGP4 676 aa15.29■□□□□ 0.04
SREK1-209ENST00000520953 TRHDEQ9UKU6 1024 aa15.29■□□□□ 0.04
SREK1-209ENST00000520953 ATP8A1Q9Y2Q0 1164 aa15.29■□□□□ 0.04
SREK1-209ENST00000520953 NFS1Q9Y697 457 aa15.29■□□□□ 0.04
SREK1-209ENST00000520953 MMP2P08253 660 aa15.29■□□□□ 0.04
SREK1-209ENST00000520953 RENBPP51606 427 aa15.29■□□□□ 0.04
SREK1-209ENST00000520953 RUNX3Q13761 415 aa15.29■□□□□ 0.04
SREK1-209ENST00000520953 MORF4L2Q15014 288 aa15.29■□□□□ 0.04
SREK1-209ENST00000520953 PDGFRLQ15198 375 aa15.29■□□□□ 0.04
SREK1-209ENST00000520953 IER5LQ5T953 404 aa15.29■□□□□ 0.04
SREK1-209ENST00000520953 KDELC2Q7Z4H8 507 aa15.29■□□□□ 0.04
SREK1-209ENST00000520953 CCDC117Q8IWD4 279 aaPredicted RBP15.29■□□□□ 0.04
SREK1-209ENST00000520953 SH2D3CQ8N5H7 860 aa15.29■□□□□ 0.04
SREK1-209ENST00000520953 ARRDC2Q8TBH0 407 aa15.29■□□□□ 0.04
SREK1-209ENST00000520953 NXPE3Q969Y0 559 aa15.29■□□□□ 0.04
SREK1-209ENST00000520953 VAT1Q99536 393 aa15.29■□□□□ 0.04
SREK1-209ENST00000520953 WDR83Q9BRX9 315 aaKnown RBP15.29■□□□□ 0.04
SREK1-209ENST00000520953 TRMT61BQ9BVS5 477 aaKnown RBP15.29■□□□□ 0.04
SREK1-209ENST00000520953 TXLNGYQ9BZA5 131 aa15.29■□□□□ 0.04
SREK1-209ENST00000520953 FBXO10Q9UK96 956 aa15.29■□□□□ 0.04
SREK1-209ENST00000520953 MYO10Q9HD67 2058 aa15.29■□□□□ 0.04
SREK1-209ENST00000520953 TICRRQ7Z2Z1 1910 aa15.29■□□□□ 0.04
SREK1-209ENST00000520953 GJA4P35212 333 aa15.28■□□□□ 0.04
SREK1-209ENST00000520953 DHX9Q08211 1270 aaKnown RBP15.28■□□□□ 0.04
SREK1-209ENST00000520953 ZNF235Q14590 738 aa15.28■□□□□ 0.04
SREK1-209ENST00000520953 ATXN7L2Q5T6C5 722 aaPredicted RBP15.28■□□□□ 0.04
SREK1-209ENST00000520953 KCTD16Q68DU8 428 aa15.28■□□□□ 0.04
SREK1-209ENST00000520953 GPR153Q6NV75 609 aa15.28■□□□□ 0.04
SREK1-209ENST00000520953 LRIG3Q6UXM1 1119 aa15.28■□□□□ 0.04
SREK1-209ENST00000520953 CAND1Q86VP6 1230 aaKnown RBP15.28■□□□□ 0.04
SREK1-209ENST00000520953 OR2W6PQ8NHA6 318 aa15.28■□□□□ 0.04
SREK1-209ENST00000520953 FATE1Q969F0 183 aa15.28■□□□□ 0.04
SREK1-209ENST00000520953 ZDHHC4Q9NPG8 344 aa15.28■□□□□ 0.04
SREK1-209ENST00000520953 SLCO3A1Q9UIG8 710 aa15.28■□□□□ 0.04
SREK1-209ENST00000520953 PRRT4C9JH25 899 aa15.28■□□□□ 0.04
SREK1-209ENST00000520953 E7EVH7 732 aa15.28■□□□□ 0.04
SREK1-209ENST00000520953 CHADO15335 359 aa15.28■□□□□ 0.04
SREK1-209ENST00000520953 PMPCBO75439 489 aa15.28■□□□□ 0.04
SREK1-209ENST00000520953 NEBLO76041 1014 aa15.28■□□□□ 0.04
SREK1-209ENST00000520953 IL9P15248 144 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms