RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 EPS15L1Q9UBC2 864 aa6.39□□□□□ -1.39
PABPC1-216ENST00000520868 NID2Q14112 1375 aa6.39□□□□□ -1.39
PABPC1-216ENST00000520868 DNAH14Q0VDD8 3507 aa6.39□□□□□ -1.39
PABPC1-216ENST00000520868 ARHGEF17Q96PE2 2063 aaPredicted RBP6.38□□□□□ -1.39
PABPC1-216ENST00000520868 TRGV11A0A075B6L2 103 aa6.38□□□□□ -1.39
PABPC1-216ENST00000520868 A0A1W2PS29 197 aa6.38□□□□□ -1.39
PABPC1-216ENST00000520868 MED19A0JLT2 244 aaPredicted RBP6.38□□□□□ -1.39
PABPC1-216ENST00000520868 B4GALT5O43286 388 aa6.38□□□□□ -1.39
PABPC1-216ENST00000520868 SLC43A1O75387 559 aa6.38□□□□□ -1.39
PABPC1-216ENST00000520868 SLITRK3O94933 977 aa6.38□□□□□ -1.39
PABPC1-216ENST00000520868 SP9P0CG40 484 aa6.38□□□□□ -1.39
PABPC1-216ENST00000520868 GLULP15104 373 aa6.38□□□□□ -1.39
PABPC1-216ENST00000520868 AXLP30530 894 aa6.38□□□□□ -1.39
PABPC1-216ENST00000520868 SLC6A4P31645 630 aa6.38□□□□□ -1.39
PABPC1-216ENST00000520868 GPC5P78333 572 aa6.38□□□□□ -1.39
PABPC1-216ENST00000520868 NTHL1P78549 312 aa6.38□□□□□ -1.39
PABPC1-216ENST00000520868 DSC1Q08554 894 aa6.38□□□□□ -1.39
PABPC1-216ENST00000520868 HTR4Q13639 388 aa6.38□□□□□ -1.39
PABPC1-216ENST00000520868 TFDP1Q14186 410 aa6.38□□□□□ -1.39
PABPC1-216ENST00000520868 GALNT17Q6IS24 598 aa6.38□□□□□ -1.39
PABPC1-216ENST00000520868 DPY19L2P1Q6NXN4 242 aa6.38□□□□□ -1.39
PABPC1-216ENST00000520868 NOTUMQ6P988 496 aa6.38□□□□□ -1.39
PABPC1-216ENST00000520868 DCLRE1AQ6PJP8 1040 aa6.38□□□□□ -1.39
PABPC1-216ENST00000520868 CPLX2Q6PUV4 134 aaKnown RBP6.38□□□□□ -1.39
PABPC1-216ENST00000520868 PRSS55Q6UWB4 352 aaPredicted RBP6.38□□□□□ -1.39
PABPC1-216ENST00000520868 PARM1Q6UWI2 310 aa6.38□□□□□ -1.39
PABPC1-216ENST00000520868 PIK3AP1Q6ZUJ8 805 aa6.38□□□□□ -1.39
PABPC1-216ENST00000520868 RUFY3Q7L099 469 aa6.38□□□□□ -1.39
PABPC1-216ENST00000520868 DGLUCYQ7Z3D6 616 aa6.38□□□□□ -1.39
PABPC1-216ENST00000520868 GRASPQ7Z6J2 395 aaPredicted RBP6.38□□□□□ -1.39
PABPC1-216ENST00000520868 CLNKQ7Z7G1 428 aa6.38□□□□□ -1.39
PABPC1-216ENST00000520868 NEK8Q86SG6 692 aa6.38□□□□□ -1.39
PABPC1-216ENST00000520868 CEP57Q86XR8 500 aa6.38□□□□□ -1.39
PABPC1-216ENST00000520868 RNF168Q8IYW5 571 aaPredicted RBP6.38□□□□□ -1.39
PABPC1-216ENST00000520868 MIER2Q8N344 545 aa6.38□□□□□ -1.39
PABPC1-216ENST00000520868 LNX2Q8N448 690 aa6.38□□□□□ -1.39
PABPC1-216ENST00000520868 HASPINQ8TF76 798 aa6.38□□□□□ -1.39
PABPC1-216ENST00000520868 FGF14Q92915 247 aa6.38□□□□□ -1.39
PABPC1-216ENST00000520868 ZNF274Q96GC6 653 aaPredicted RBP6.38□□□□□ -1.39
PABPC1-216ENST00000520868 AIFM2Q9BRQ8 373 aa6.38□□□□□ -1.39
PABPC1-216ENST00000520868 RHOBTB2Q9BYZ6 727 aa6.38□□□□□ -1.39
PABPC1-216ENST00000520868 NXF3Q9H4D5 531 aaKnown RBP6.38□□□□□ -1.39
PABPC1-216ENST00000520868 XPNPEP1Q9NQW7 623 aa6.38□□□□□ -1.39
PABPC1-216ENST00000520868 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.38□□□□□ -1.395e-16■■■■□ 25.2
PABPC1-216ENST00000520868 GJB4Q9NTQ9 266 aa6.38□□□□□ -1.39
PABPC1-216ENST00000520868 ZDHHC7Q9NXF8 308 aa6.38□□□□□ -1.39
PABPC1-216ENST00000520868 KCTD5Q9NXV2 234 aa6.38□□□□□ -1.39
PABPC1-216ENST00000520868 LRIT1Q9P2V4 623 aa6.38□□□□□ -1.39
PABPC1-216ENST00000520868 CACNG4Q9UBN1 327 aa6.38□□□□□ -1.39
PABPC1-216ENST00000520868 ADAM28Q9UKQ2 775 aa6.38□□□□□ -1.39
PABPC1-216ENST00000520868 PCDHB1Q9Y5F3 818 aa6.38□□□□□ -1.39
PABPC1-216ENST00000520868 CYP46A1Q9Y6A2 500 aa6.38□□□□□ -1.39
PABPC1-216ENST00000520868 ZNF292O60281 2723 aa6.37□□□□□ -1.39
PABPC1-216ENST00000520868 ANHXE9PGG2 379 aa6.37□□□□□ -1.39
PABPC1-216ENST00000520868 CCL16O15467 120 aa6.37□□□□□ -1.39
PABPC1-216ENST00000520868 BAG4O95429 457 aaKnown RBP6.37□□□□□ -1.39
PABPC1-216ENST00000520868 ARF4P18085 180 aaPredicted RBP6.37□□□□□ -1.39
PABPC1-216ENST00000520868 CD72P21854 359 aa6.37□□□□□ -1.39
PABPC1-216ENST00000520868 GLRA2P23416 452 aa6.37□□□□□ -1.39
PABPC1-216ENST00000520868 RECQLP46063 649 aaPredicted RBP6.37□□□□□ -1.39
PABPC1-216ENST00000520868 MBTD1Q05BQ5 628 aa6.37□□□□□ -1.39
PABPC1-216ENST00000520868 PIGFQ07326 219 aa6.37□□□□□ -1.39
PABPC1-216ENST00000520868 CAPSQ13938 189 aa6.37□□□□□ -1.39
PABPC1-216ENST00000520868 MXD4Q14582 209 aaPredicted RBP6.37□□□□□ -1.39
PABPC1-216ENST00000520868 GEN1Q17RS7 908 aa6.37□□□□□ -1.39
PABPC1-216ENST00000520868 SLC44A4Q53GD3 710 aa6.37□□□□□ -1.39
PABPC1-216ENST00000520868 EARS2Q5JPH6 523 aaKnown RBP6.37□□□□□ -1.39
PABPC1-216ENST00000520868 PPM1LQ5SGD2 360 aa6.37□□□□□ -1.39
PABPC1-216ENST00000520868 FAM171A1Q5VUB5 890 aa6.37□□□□□ -1.39
PABPC1-216ENST00000520868 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.37□□□□□ -1.39
PABPC1-216ENST00000520868 CENPQQ7L2Z9 268 aaPredicted RBP6.37□□□□□ -1.39
PABPC1-216ENST00000520868 MAEAQ7L5Y9 396 aa6.37□□□□□ -1.39
PABPC1-216ENST00000520868 ADGRG3Q86Y34 549 aa6.37□□□□□ -1.39
PABPC1-216ENST00000520868 HACE1Q8IYU2 909 aa6.37□□□□□ -1.39
PABPC1-216ENST00000520868 PIGOQ8TEQ8 1089 aa6.37□□□□□ -1.39
PABPC1-216ENST00000520868 RUBCNQ92622 972 aa6.37□□□□□ -1.39
PABPC1-216ENST00000520868 NELL1Q92832 810 aa6.37□□□□□ -1.39
PABPC1-216ENST00000520868 CCDC51Q96ER9 411 aa6.37□□□□□ -1.39
PABPC1-216ENST00000520868 EIF2AK1Q9BQI3 630 aaKnown RBP6.37□□□□□ -1.39
PABPC1-216ENST00000520868 PAAF1Q9BRP4 392 aa6.37□□□□□ -1.39
PABPC1-216ENST00000520868 BRINP2Q9C0B6 783 aa6.37□□□□□ -1.39
PABPC1-216ENST00000520868 DLGAP2Q9P1A6 1054 aa6.37□□□□□ -1.39
PABPC1-216ENST00000520868 FNIP2Q9P278 1114 aa6.37□□□□□ -1.39
PABPC1-216ENST00000520868 CDYLQ9Y232 598 aa6.37□□□□□ -1.39
PABPC1-216ENST00000520868 GPR179Q6PRD1 2367 aa6.37□□□□□ -1.39
PABPC1-216ENST00000520868 WDR81Q562E7 1941 aa6.37□□□□□ -1.39
PABPC1-216ENST00000520868 CACNA1AO00555 2505 aa6.36□□□□□ -1.39
PABPC1-216ENST00000520868 NCOR2Q9Y618 2525 aa6.36□□□□□ -1.39
PABPC1-216ENST00000520868 PRAMEF33A0A0G2JMD5 474 aa6.36□□□□□ -1.39
PABPC1-216ENST00000520868 A0A1B0GUA9 196 aa6.36□□□□□ -1.39
PABPC1-216ENST00000520868 KANSL1LA0AUZ9 987 aa6.36□□□□□ -1.39
PABPC1-216ENST00000520868 CASTOR2A6NHX0 329 aa6.36□□□□□ -1.39
PABPC1-216ENST00000520868 TBX3O15119 743 aa6.36□□□□□ -1.39
PABPC1-216ENST00000520868 ADAM12O43184 909 aa6.36□□□□□ -1.39
PABPC1-216ENST00000520868 PRAMEF10O60809 474 aa6.36□□□□□ -1.39
PABPC1-216ENST00000520868 KINO60870 393 aaKnown RBP6.36□□□□□ -1.39
PABPC1-216ENST00000520868 SBK3P0C264 359 aa6.36□□□□□ -1.39
PABPC1-216ENST00000520868 GCFC2P16383 781 aaKnown RBP6.36□□□□□ -1.39
PABPC1-216ENST00000520868 XBP1P17861 261 aa6.36□□□□□ -1.39
PABPC1-216ENST00000520868 ARL2P36404 184 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms