RNA–Protein interactions for RNA: ENST00000520532.5

TRAPPC9-207, Transcript of trafficking protein particle complex 9, humanhuman

TSL 5

Gene TRAPPC9, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-207ENST00000520532 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.55□□□□□ -1.2
TRAPPC9-207ENST00000520532 EPN1Q9Y6I3 576 aaPredicted RBP7.55□□□□□ -1.2
TRAPPC9-207ENST00000520532 WASF2Q9Y6W5 498 aa7.55□□□□□ -1.2
TRAPPC9-207ENST00000520532 ABCA7Q8IZY2 2146 aa7.55□□□□□ -1.2
TRAPPC9-207ENST00000520532 BPTFQ12830 3046 aa7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 TMEM131Q92545 1883 aa7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 A0A1W2PQ67 120 aa7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 LNP1A1A4G5 178 aa7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 TSPAN11A1L157 253 aa7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 SOWAHDA6NJG2 315 aa7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 METTL12A8MUP2 240 aa7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 MID1O15344 667 aa7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 ARHGAP6O43182 974 aa7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 SMAD6O43541 496 aaKnown RBP7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 NRDCO43847 1150 aa7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 RNGTTO60942 597 aaKnown RBP7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 ZNF821O75541 412 aaPredicted RBP7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 RNASEH2AO75792 299 aaKnown RBP7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 ZNF189O75820 626 aaPredicted RBP7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 MT-CO1P00395 513 aa7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 SERPINF2P08697 491 aa7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 VAV1P15498 845 aa7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 TCF4P15884 667 aa7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 ZFXP17010 805 aaPredicted RBP7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 GLDCP23378 1020 aa7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 CHRNA3P32297 505 aa7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 ACVRL1P37023 503 aa7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 PTGER3P43115 390 aa7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 MAGEA1P43355 309 aa7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 GRIA4P48058 902 aa7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 DHPSP49366 369 aaPredicted RBP7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 RENBPP51606 427 aa7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 NEK3P51956 506 aa7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 RHOAP61586 193 aa7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 AP1S1P61966 158 aa7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 CREB5Q02930 508 aa7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 DUOXA1Q1HG43 343 aa7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 CARD16Q5EG05 197 aa7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 DAB2IPQ5VWQ8 1189 aa7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 NCBP2-AS2Q69YL0 99 aa7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 ALG1LQ6GMV1 187 aa7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 KIAA1161Q6NSJ0 714 aa7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 LINGO4Q6UY18 593 aa7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 CACUL1Q86Y37 369 aa7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 SLC41A1Q8IVJ1 513 aa7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 BBS5Q8N3I7 341 aa7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 ATPAF2Q8N5M1 289 aa7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 AADATQ8N5Z0 425 aa7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 C12orf50Q8NA57 414 aaPredicted RBP7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 FAM174AQ8TBP5 190 aa7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 HSPH1Q92598 858 aa7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 HDAC11Q96DB2 347 aa7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 BTBD6Q96KE9 485 aa7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 ZNF830Q96NB3 372 aaPredicted RBP7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 PSKH2Q96QS6 385 aa7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 HEPHQ9BQS7 1158 aa7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 SPON2Q9BUD6 331 aa7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 GPR174Q9BXC1 333 aa7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 NUSAP1Q9BXS6 441 aaKnown RBP7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 CALN1Q9BXU9 219 aa7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 CPEB1Q9BZB8 566 aaKnown RBP7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 TSGA10Q9BZW7 698 aa7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 ARRDC1-AS1Q9H2J1 176 aa7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 SP110Q9HB58 689 aa7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 CD93Q9NPY3 652 aa7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 DKK3Q9UBP4 350 aa7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 DMTF1Q9Y222 760 aa7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 PCDHA13Q9Y5I0 950 aa7.54□□□□□ -1.2
TRAPPC9-207ENST00000520532 LRRK1Q38SD2 2015 aa7.53□□□□□ -1.2
TRAPPC9-207ENST00000520532 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.53□□□□□ -1.2
TRAPPC9-207ENST00000520532 A0A1B0GTW7 788 aa7.53□□□□□ -1.2
TRAPPC9-207ENST00000520532 A0A1W2PP55 124 aa7.53□□□□□ -1.2
TRAPPC9-207ENST00000520532 CCDC66A2RUB6 948 aa7.53□□□□□ -1.2
TRAPPC9-207ENST00000520532 LRRD1A4D1F6 860 aa7.53□□□□□ -1.2
TRAPPC9-207ENST00000520532 K7ERQ8 282 aa7.53□□□□□ -1.2
TRAPPC9-207ENST00000520532 KPNA3O00505 521 aaPredicted RBP7.53□□□□□ -1.2
TRAPPC9-207ENST00000520532 KHNYNO15037 678 aaKnown RBP7.53□□□□□ -1.2
TRAPPC9-207ENST00000520532 BUB1O43683 1085 aa7.53□□□□□ -1.2
TRAPPC9-207ENST00000520532 SPOPO43791 374 aa7.53□□□□□ -1.2
TRAPPC9-207ENST00000520532 MFSD11O43934 449 aa7.53□□□□□ -1.2
TRAPPC9-207ENST00000520532 SOCS5O75159 536 aa7.53□□□□□ -1.2
TRAPPC9-207ENST00000520532 POP4O95707 220 aaKnown RBP7.53□□□□□ -1.2
TRAPPC9-207ENST00000520532 IGHV4-34P06331 123 aa7.53□□□□□ -1.2
TRAPPC9-207ENST00000520532 CTSLP07711 333 aa7.53□□□□□ -1.2
TRAPPC9-207ENST00000520532 SYPP08247 313 aa7.53□□□□□ -1.2
TRAPPC9-207ENST00000520532 ADRB3P13945 408 aa7.53□□□□□ -1.2
TRAPPC9-207ENST00000520532 MX2P20592 715 aa7.53□□□□□ -1.2
TRAPPC9-207ENST00000520532 CD27P26842 260 aa7.53□□□□□ -1.2
TRAPPC9-207ENST00000520532 SERPINA4P29622 427 aa7.53□□□□□ -1.2
TRAPPC9-207ENST00000520532 ACSL1P33121 698 aa7.53□□□□□ -1.2
TRAPPC9-207ENST00000520532 PTPN7P35236 360 aa7.53□□□□□ -1.2
TRAPPC9-207ENST00000520532 GARSP41250 739 aaKnown RBP7.53□□□□□ -1.2
TRAPPC9-207ENST00000520532 PAPOLAP51003 745 aaKnown RBP7.53□□□□□ -1.2
TRAPPC9-207ENST00000520532 AFF3P51826 1226 aaKnown RBP7.53□□□□□ -1.2
TRAPPC9-207ENST00000520532 TAS2R40P59535 323 aa7.53□□□□□ -1.2
TRAPPC9-207ENST00000520532 NSUN2Q08J23 767 aaKnown RBP eCLIP7.53□□□□□ -1.2
TRAPPC9-207ENST00000520532 SPEM2Q0P670 501 aa7.53□□□□□ -1.2
TRAPPC9-207ENST00000520532 GALNT2Q10471 571 aa7.53□□□□□ -1.2
TRAPPC9-207ENST00000520532 OVGP1Q12889 678 aa7.53□□□□□ -1.2
TRAPPC9-207ENST00000520532 MESDQ14696 234 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms