RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 DNAJC28Q9NX36 388 aa26.09■■□□□ 1.77
COL13A1-213ENST00000520267 TMEM161AQ9NX61 479 aa26.09■■□□□ 1.77
COL13A1-213ENST00000520267 J3KR12 359 aa26.09■■□□□ 1.77
COL13A1-213ENST00000520267 ALOX15P16050 662 aaPredicted RBP26.09■■□□□ 1.77
COL13A1-213ENST00000520267 GNAZP19086 355 aa26.09■■□□□ 1.77
COL13A1-213ENST00000520267 GATMP50440 423 aa26.09■■□□□ 1.77
COL13A1-213ENST00000520267 VWA5B1Q5TIE3 1220 aa26.09■■□□□ 1.77
COL13A1-213ENST00000520267 ENDOVQ8N8Q3 282 aaKnown RBP26.09■■□□□ 1.77
COL13A1-213ENST00000520267 SLC43A3Q8NBI5 491 aa26.09■■□□□ 1.77
COL13A1-213ENST00000520267 RBM15BQ8NDT2 890 aaKnown RBP26.09■■□□□ 1.77
COL13A1-213ENST00000520267 SH3TC2Q8TF17 1288 aa26.09■■□□□ 1.77
COL13A1-213ENST00000520267 PPP1R2P1Q96PQ5 205 aa26.09■■□□□ 1.77
COL13A1-213ENST00000520267 TACO1Q9BSH4 297 aaKnown RBP26.09■■□□□ 1.77
COL13A1-213ENST00000520267 TLK1Q9UKI8 766 aa26.09■■□□□ 1.77
COL13A1-213ENST00000520267 APOBEC2Q9Y235 224 aaKnown RBP26.09■■□□□ 1.77
COL13A1-213ENST00000520267 SLC27A5Q9Y2P5 690 aa26.09■■□□□ 1.77
COL13A1-213ENST00000520267 H0Y3Z8 333 aa26.08■■□□□ 1.77
COL13A1-213ENST00000520267 RHOQP17081 205 aa26.08■■□□□ 1.77
COL13A1-213ENST00000520267 TBCCQ15814 346 aa26.08■■□□□ 1.77
COL13A1-213ENST00000520267 CNGA3Q16281 694 aa26.08■■□□□ 1.77
COL13A1-213ENST00000520267 KHDC1Q4VXA5 237 aaKnown RBP26.08■■□□□ 1.77
COL13A1-213ENST00000520267 TMPRSS6Q8IU80 811 aa26.08■■□□□ 1.77
COL13A1-213ENST00000520267 ZYG11BQ9C0D3 744 aa26.08■■□□□ 1.77
COL13A1-213ENST00000520267 TASP1Q9H6P5 420 aa26.08■■□□□ 1.77
COL13A1-213ENST00000520267 STARD7Q9NQZ5 370 aa26.08■■□□□ 1.77
COL13A1-213ENST00000520267 FNIP2Q9P278 1114 aa26.08■■□□□ 1.77
COL13A1-213ENST00000520267 SPECC1L-ADORA2AF8WAN1 911 aa26.08■■□□□ 1.77
COL13A1-213ENST00000520267 HAPLN1P10915 354 aaPredicted RBP26.08■■□□□ 1.77
COL13A1-213ENST00000520267 YWHAQP27348 245 aa26.08■■□□□ 1.77
COL13A1-213ENST00000520267 PGM1P36871 562 aa26.08■■□□□ 1.77
COL13A1-213ENST00000520267 NDST2P52849 883 aa26.08■■□□□ 1.77
COL13A1-213ENST00000520267 WNT3AP56704 352 aa26.08■■□□□ 1.77
COL13A1-213ENST00000520267 TLDC1Q6P9B6 456 aa26.08■■□□□ 1.77
COL13A1-213ENST00000520267 KDELC1Q6UW63 502 aa26.08■■□□□ 1.77
COL13A1-213ENST00000520267 MFSD6LQ8IWD5 586 aa26.08■■□□□ 1.77
COL13A1-213ENST00000520267 TMEM151AQ8N4L1 468 aa26.08■■□□□ 1.77
COL13A1-213ENST00000520267 FBXO32Q969P5 355 aa26.08■■□□□ 1.77
COL13A1-213ENST00000520267 KLHL5Q96PQ7 755 aa26.08■■□□□ 1.77
COL13A1-213ENST00000520267 MRM3Q9HC36 420 aaKnown RBP26.08■■□□□ 1.77
COL13A1-213ENST00000520267 TREX1Q9NSU2 369 aa26.08■■□□□ 1.77
COL13A1-213ENST00000520267 TMEM248Q9NWD8 314 aa26.08■■□□□ 1.77
COL13A1-213ENST00000520267 ANKRD6Q9Y2G4 727 aa26.08■■□□□ 1.77
COL13A1-213ENST00000520267 TRIM13O60858 407 aa26.07■■□□□ 1.76
COL13A1-213ENST00000520267 RPSAP08865 295 aaKnown RBP26.07■■□□□ 1.76
COL13A1-213ENST00000520267 SBK3P0C264 359 aa26.07■■□□□ 1.76
COL13A1-213ENST00000520267 SLC35E2BP0CK96 405 aa26.07■■□□□ 1.76
COL13A1-213ENST00000520267 SEPT6Q14141 434 aa26.07■■□□□ 1.76
COL13A1-213ENST00000520267 KPNB1Q14974 876 aaKnown RBP26.07■■□□□ 1.76
COL13A1-213ENST00000520267 MIB1Q86YT6 1006 aa26.07■■□□□ 1.76
COL13A1-213ENST00000520267 ZNF781Q8N8C0 355 aa26.07■■□□□ 1.76
COL13A1-213ENST00000520267 PTCD2Q8WV60 388 aaKnown RBP26.07■■□□□ 1.76
COL13A1-213ENST00000520267 IGSF8Q969P0 613 aa26.07■■□□□ 1.76
COL13A1-213ENST00000520267 SLC25A51Q9H1U9 297 aa26.07■■□□□ 1.76
COL13A1-213ENST00000520267 MMADHCQ9H3L0 296 aaPredicted RBP26.07■■□□□ 1.76
COL13A1-213ENST00000520267 NT5MQ9NPB1 228 aa26.07■■□□□ 1.76
COL13A1-213ENST00000520267 HCSTQ9UBK5 93 aa26.07■■□□□ 1.76
COL13A1-213ENST00000520267 SORCS3Q9UPU3 1222 aa26.07■■□□□ 1.76
COL13A1-213ENST00000520267 FAM92AA1XBS5 289 aa26.07■■□□□ 1.76
COL13A1-213ENST00000520267 AOC1P19801 751 aa26.07■■□□□ 1.76
COL13A1-213ENST00000520267 MAXP61244 160 aa26.07■■□□□ 1.76
COL13A1-213ENST00000520267 USP4Q13107 963 aa26.07■■□□□ 1.76
COL13A1-213ENST00000520267 LHX8Q68G74 356 aa26.07■■□□□ 1.76
COL13A1-213ENST00000520267 LRRC8DQ7L1W4 858 aa26.07■■□□□ 1.76
COL13A1-213ENST00000520267 SLC25A41Q8N5S1 370 aa26.07■■□□□ 1.76
COL13A1-213ENST00000520267 KCTD4Q8WVF5 259 aa26.07■■□□□ 1.76
COL13A1-213ENST00000520267 MOCOSQ96EN8 888 aa26.07■■□□□ 1.76
COL13A1-213ENST00000520267 GATA5Q9BWX5 397 aaPredicted RBP26.07■■□□□ 1.76
COL13A1-213ENST00000520267 ACE2Q9BYF1 805 aaPredicted RBP26.07■■□□□ 1.76
COL13A1-213ENST00000520267 CRISPLD1Q9H336 500 aa26.07■■□□□ 1.76
COL13A1-213ENST00000520267 MTPAPQ9NVV4 582 aaKnown RBP eCLIP26.07■■□□□ 1.76
COL13A1-213ENST00000520267 GREB1Q4ZG55 1949 aa26.06■■□□□ 1.76
COL13A1-213ENST00000520267 TK2O00142 265 aa26.06■■□□□ 1.76
COL13A1-213ENST00000520267 HSPA4LO95757 839 aa26.06■■□□□ 1.76
COL13A1-213ENST00000520267 SLC1A2P43004 574 aa26.06■■□□□ 1.76
COL13A1-213ENST00000520267 SLC10A7Q0GE19 358 aa26.06■■□□□ 1.76
COL13A1-213ENST00000520267 HNRNPDQ14103 355 aaKnown RBP26.06■■□□□ 1.76
COL13A1-213ENST00000520267 UGP2Q16851 508 aa26.06■■□□□ 1.76
COL13A1-213ENST00000520267 RASIP1Q5U651 963 aa26.06■■□□□ 1.76
COL13A1-213ENST00000520267 RAP1GAP2Q684P5 730 aa26.06■■□□□ 1.76
COL13A1-213ENST00000520267 ZNF280DQ6N043 979 aa26.06■■□□□ 1.76
COL13A1-213ENST00000520267 ATP6V0D2Q8N8Y2 350 aa26.06■■□□□ 1.76
COL13A1-213ENST00000520267 WDR60Q8WVS4 1066 aa26.06■■□□□ 1.76
COL13A1-213ENST00000520267 TSEN34Q9BSV6 310 aaKnown RBP26.06■■□□□ 1.76
COL13A1-213ENST00000520267 FAM96AQ9H5X1 160 aa26.06■■□□□ 1.76
COL13A1-213ENST00000520267 OXSMQ9NWU1 459 aa26.06■■□□□ 1.76
COL13A1-213ENST00000520267 TMEM114B3SHH9 223 aa26.05■■□□□ 1.76
COL13A1-213ENST00000520267 ENPP3O14638 875 aa26.05■■□□□ 1.76
COL13A1-213ENST00000520267 HMBSP08397 361 aa26.05■■□□□ 1.76
COL13A1-213ENST00000520267 TAF10Q12962 218 aa26.05■■□□□ 1.76
COL13A1-213ENST00000520267 ZNF460Q14592 562 aa26.05■■□□□ 1.76
COL13A1-213ENST00000520267 TRIP4Q15650 581 aaPredicted RBP26.05■■□□□ 1.76
COL13A1-213ENST00000520267 RSPO2Q6UXX9 243 aaPredicted RBP26.05■■□□□ 1.76
COL13A1-213ENST00000520267 CEP97Q8IW35 865 aa26.05■■□□□ 1.76
COL13A1-213ENST00000520267 ABI1Q8IZP0 508 aa26.05■■□□□ 1.76
COL13A1-213ENST00000520267 RAET1EQ8TD07 263 aa26.05■■□□□ 1.76
COL13A1-213ENST00000520267 IMP4Q96G21 291 aaKnown RBP26.05■■□□□ 1.76
COL13A1-213ENST00000520267 ACSS2Q9NR19 701 aa26.05■■□□□ 1.76
COL13A1-213ENST00000520267 PLA2G4CQ9UP65 541 aa26.05■■□□□ 1.76
COL13A1-213ENST00000520267 RUVBL2Q9Y230 463 aaKnown RBP26.05■■□□□ 1.76
COL13A1-213ENST00000520267 SEC23IPQ9Y6Y8 1000 aaKnown RBP26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms