RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 ECEL1O95672 775 aa7.75□□□□□ -1.17
SDCBP-206ENST00000519115 LMNAP02545 664 aaKnown RBP7.75□□□□□ -1.17
SDCBP-206ENST00000519115 ATP5BP06576 529 aaKnown RBP7.75□□□□□ -1.17
SDCBP-206ENST00000519115 EPHX1P07099 455 aa7.75□□□□□ -1.17
SDCBP-206ENST00000519115 RHOCP08134 193 aa7.75□□□□□ -1.17
SDCBP-206ENST00000519115 DLDP09622 509 aaKnown RBP7.75□□□□□ -1.17
SDCBP-206ENST00000519115 NDUFV2P19404 249 aa7.75□□□□□ -1.17
SDCBP-206ENST00000519115 MX2P20592 715 aa7.75□□□□□ -1.17
SDCBP-206ENST00000519115 SERPINB6P35237 376 aa7.75□□□□□ -1.17
SDCBP-206ENST00000519115 PTGIRP43119 386 aa7.75□□□□□ -1.17
SDCBP-206ENST00000519115 STK19P49842 368 aaPredicted RBP7.75□□□□□ -1.17
SDCBP-206ENST00000519115 CDH4P55283 916 aa7.75□□□□□ -1.17
SDCBP-206ENST00000519115 ZNF177Q13360 481 aaPredicted RBP7.75□□□□□ -1.17
SDCBP-206ENST00000519115 SIM2Q14190 667 aaPredicted RBP7.75□□□□□ -1.17
SDCBP-206ENST00000519115 KRT81Q14533 505 aa7.75□□□□□ -1.17
SDCBP-206ENST00000519115 STARD3Q14849 445 aa7.75□□□□□ -1.17
SDCBP-206ENST00000519115 OASLQ15646 514 aaKnown RBP7.75□□□□□ -1.17
SDCBP-206ENST00000519115 PTPRNQ16849 979 aa7.75□□□□□ -1.17
SDCBP-206ENST00000519115 ATP13A4Q4VNC1 1196 aa7.75□□□□□ -1.17
SDCBP-206ENST00000519115 ZFYVE27Q5T4F4 411 aa7.75□□□□□ -1.17
SDCBP-206ENST00000519115 ARTNQ5T4W7 220 aa7.75□□□□□ -1.17
SDCBP-206ENST00000519115 TMCO4Q5TGY1 634 aa7.75□□□□□ -1.17
SDCBP-206ENST00000519115 FAM72AQ5TYM5 149 aa7.75□□□□□ -1.17
SDCBP-206ENST00000519115 MANEALQ5VSG8 457 aa7.75□□□□□ -1.17
SDCBP-206ENST00000519115 ARMC3Q5W041 872 aa7.75□□□□□ -1.17
SDCBP-206ENST00000519115 RNF219Q5W0B1 726 aaPredicted RBP7.75□□□□□ -1.17
SDCBP-206ENST00000519115 FAM72DQ6L9T8 149 aa7.75□□□□□ -1.17
SDCBP-206ENST00000519115 RWDD4Q6NW29 188 aaKnown RBP7.75□□□□□ -1.17
SDCBP-206ENST00000519115 KIAA1324Q6UXG2 1013 aaKnown RBP7.75□□□□□ -1.17
SDCBP-206ENST00000519115 PCGF5Q86SE9 256 aa7.75□□□□□ -1.17
SDCBP-206ENST00000519115 ALYREFQ86V81 257 aaKnown RBP7.75□□□□□ -1.17
SDCBP-206ENST00000519115 KBTBD6Q86V97 674 aa7.75□□□□□ -1.17
SDCBP-206ENST00000519115 RASSF3Q86WH2 238 aa7.75□□□□□ -1.17
SDCBP-206ENST00000519115 FAM72BQ86X60 149 aa7.75□□□□□ -1.17
SDCBP-206ENST00000519115 FAM160A2Q8N612 972 aaPredicted RBP7.75□□□□□ -1.17
SDCBP-206ENST00000519115 PLD5Q8N7P1 536 aa7.75□□□□□ -1.17
SDCBP-206ENST00000519115 ZNF557Q8N988 423 aaPredicted RBP7.75□□□□□ -1.17
SDCBP-206ENST00000519115 SUMF1Q8NBK3 374 aa7.75□□□□□ -1.17
SDCBP-206ENST00000519115 GAB3Q8WWW8 586 aa7.75□□□□□ -1.17
SDCBP-206ENST00000519115 P3H4Q92791 437 aa7.75□□□□□ -1.17
SDCBP-206ENST00000519115 RPL10LQ96L21 214 aaKnown RBP7.75□□□□□ -1.17
SDCBP-206ENST00000519115 PEBP4Q96S96 227 aa7.75□□□□□ -1.17
SDCBP-206ENST00000519115 KRT12Q99456 494 aa7.75□□□□□ -1.17
SDCBP-206ENST00000519115 GABRG3Q99928 467 aa7.75□□□□□ -1.17
SDCBP-206ENST00000519115 SNRNP25Q9BV90 132 aaKnown RBP7.75□□□□□ -1.17
SDCBP-206ENST00000519115 CALN1Q9BXU9 219 aa7.75□□□□□ -1.17
SDCBP-206ENST00000519115 FRMD8Q9BZ67 464 aaPredicted RBP7.75□□□□□ -1.17
SDCBP-206ENST00000519115 MUC3BQ9H195 1237 aa7.75□□□□□ -1.17
SDCBP-206ENST00000519115 MTG2Q9H4K7 406 aa7.75□□□□□ -1.17
SDCBP-206ENST00000519115 CD248Q9HCU0 757 aa7.75□□□□□ -1.17
SDCBP-206ENST00000519115 ARFGAP3Q9NP61 516 aa7.75□□□□□ -1.17
SDCBP-206ENST00000519115 CD93Q9NPY3 652 aa7.75□□□□□ -1.17
SDCBP-206ENST00000519115 WHRNQ9P202 907 aa7.75□□□□□ -1.17
SDCBP-206ENST00000519115 KIAA1522Q9P206 1035 aaPredicted RBP7.75□□□□□ -1.17
SDCBP-206ENST00000519115 OR12D3Q9UGF7 316 aa7.75□□□□□ -1.17
SDCBP-206ENST00000519115 EBF1Q9UH73 591 aa7.75□□□□□ -1.17
SDCBP-206ENST00000519115 PCSK1NQ9UHG2 260 aa7.75□□□□□ -1.17
SDCBP-206ENST00000519115 VPS28Q9UK41 221 aa7.75□□□□□ -1.17
SDCBP-206ENST00000519115 PLA2G4CQ9UP65 541 aa7.75□□□□□ -1.17
SDCBP-206ENST00000519115 NEU2Q9Y3R4 380 aa7.75□□□□□ -1.17
SDCBP-206ENST00000519115 DOCK9Q9BZ29 2069 aa7.75□□□□□ -1.17
SDCBP-206ENST00000519115 ANKRD36A6QL64 1941 aa7.74□□□□□ -1.17
SDCBP-206ENST00000519115 TP53BP1Q12888 1972 aaPredicted RBP7.74□□□□□ -1.17
SDCBP-206ENST00000519115 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.74□□□□□ -1.17
SDCBP-206ENST00000519115 CCDC163A0A0D9SF12 145 aa7.74□□□□□ -1.17
SDCBP-206ENST00000519115 DRGXA6NNA5 263 aa7.74□□□□□ -1.17
SDCBP-206ENST00000519115 APOL1O14791 398 aa7.74□□□□□ -1.17
SDCBP-206ENST00000519115 MCF2LO15068 1137 aa7.74□□□□□ -1.17
SDCBP-206ENST00000519115 NPC1O15118 1278 aa7.74□□□□□ -1.17
SDCBP-206ENST00000519115 ZBTB24O43167 697 aaPredicted RBP7.74□□□□□ -1.17
SDCBP-206ENST00000519115 CREB3O43889 395 aa7.74□□□□□ -1.17
SDCBP-206ENST00000519115 SYNCRIPO60506 623 aaKnown RBP7.74□□□□□ -1.17
SDCBP-206ENST00000519115 SNAP91O60641 907 aa7.74□□□□□ -1.17
SDCBP-206ENST00000519115 ASLP04424 464 aa7.74□□□□□ -1.17
SDCBP-206ENST00000519115 TCF4P15884 667 aa7.74□□□□□ -1.17
SDCBP-206ENST00000519115 BCKDHBP21953 392 aa7.74□□□□□ -1.17
SDCBP-206ENST00000519115 ST8SIA6P61647 398 aa7.74□□□□□ -1.17
SDCBP-206ENST00000519115 ECT2LQ008S8 904 aa7.74□□□□□ -1.17
SDCBP-206ENST00000519115 ZNF211Q13398 564 aaPredicted RBP7.74□□□□□ -1.17
SDCBP-206ENST00000519115 ENPP2Q13822 863 aa7.74□□□□□ -1.17
SDCBP-206ENST00000519115 PTK6Q13882 451 aa7.74□□□□□ -1.17
SDCBP-206ENST00000519115 DPYSQ14117 519 aa7.74□□□□□ -1.17
SDCBP-206ENST00000519115 PDK1Q15118 436 aa7.74□□□□□ -1.17
SDCBP-206ENST00000519115 NOMO1Q15155 1222 aa7.74□□□□□ -1.17
SDCBP-206ENST00000519115 KCNT1Q5JUK3 1230 aa7.74□□□□□ -1.17
SDCBP-206ENST00000519115 TEX35Q5T0J7 233 aa7.74□□□□□ -1.17
SDCBP-206ENST00000519115 TXNRD3NBQ6F5E7 133 aa7.74□□□□□ -1.17
SDCBP-206ENST00000519115 RELL1Q8IUW5 271 aa7.74□□□□□ -1.17
SDCBP-206ENST00000519115 MREGQ8N565 214 aa7.74□□□□□ -1.17
SDCBP-206ENST00000519115 FRMD1Q8N878 549 aa7.74□□□□□ -1.17
SDCBP-206ENST00000519115 OR7D4Q8NG98 312 aa7.74□□□□□ -1.17
SDCBP-206ENST00000519115 PCDH19Q8TAB3 1148 aa7.74□□□□□ -1.17
SDCBP-206ENST00000519115 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.74□□□□□ -1.17
SDCBP-206ENST00000519115 TTC17Q96AE7 1141 aa7.74□□□□□ -1.17
SDCBP-206ENST00000519115 TBC1D31Q96DN5 1066 aa7.74□□□□□ -1.17
SDCBP-206ENST00000519115 ALG14Q96F25 216 aa7.74□□□□□ -1.17
SDCBP-206ENST00000519115 MYO19Q96H55 970 aa7.74□□□□□ -1.17
SDCBP-206ENST00000519115 MRGPRX3Q96LB0 322 aa7.74□□□□□ -1.17
SDCBP-206ENST00000519115 MRGPRX1Q96LB2 322 aa7.74□□□□□ -1.17
SDCBP-206ENST00000519115 TSGA13Q96PP4 275 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms