RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 CYTH1Q15438 398 aa13.55□□□□□ -0.24
VEGFA-219ENST00000518824 AFMIDQ63HM1 303 aa13.55□□□□□ -0.24
VEGFA-219ENST00000518824 MINDY1Q8N5J2 469 aa13.55□□□□□ -0.24
VEGFA-219ENST00000518824 PCDH20Q8N6Y1 951 aaKnown RBP13.55□□□□□ -0.24
VEGFA-219ENST00000518824 NIPA2Q8N8Q9 360 aa13.55□□□□□ -0.24
VEGFA-219ENST00000518824 OR2T34Q8NGX1 318 aa13.55□□□□□ -0.24
VEGFA-219ENST00000518824 CEP76Q8TAP6 659 aa13.55□□□□□ -0.24
VEGFA-219ENST00000518824 KLK6Q92876 244 aa13.55□□□□□ -0.24
VEGFA-219ENST00000518824 CEP44Q9C0F1 390 aa13.55□□□□□ -0.24
VEGFA-219ENST00000518824 PCED1AQ9H1Q7 454 aa13.55□□□□□ -0.24
VEGFA-219ENST00000518824 RETREG1Q9H6L5 497 aa13.55□□□□□ -0.24
VEGFA-219ENST00000518824 ZDHHC6Q9H6R6 413 aa13.55□□□□□ -0.24
VEGFA-219ENST00000518824 CAAP1Q9H8G2 361 aa13.55□□□□□ -0.24
VEGFA-219ENST00000518824 PDFQ9HBH1 243 aa13.55□□□□□ -0.24
VEGFA-219ENST00000518824 PCDH18Q9HCL0 1135 aa13.55□□□□□ -0.24
VEGFA-219ENST00000518824 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.55□□□□□ -0.24
VEGFA-219ENST00000518824 LHX3Q9UBR4 397 aa13.55□□□□□ -0.24
VEGFA-219ENST00000518824 IL36AQ9UHA7 158 aa13.55□□□□□ -0.24
VEGFA-219ENST00000518824 IP6K2Q9UHH9 426 aa13.55□□□□□ -0.24
VEGFA-219ENST00000518824 TFR2Q9UP52 801 aa13.55□□□□□ -0.24
VEGFA-219ENST00000518824 CA5BQ9Y2D0 317 aa13.55□□□□□ -0.24
VEGFA-219ENST00000518824 KNL1Q8NG31 2342 aa13.55□□□□□ -0.24
VEGFA-219ENST00000518824 CACNA1AO00555 2505 aa13.54□□□□□ -0.24
VEGFA-219ENST00000518824 TBC1D3DA0A087WVF3 549 aa13.54□□□□□ -0.24
VEGFA-219ENST00000518824 TBC1D3IA0A087WXS9 549 aa13.54□□□□□ -0.24
VEGFA-219ENST00000518824 TBC1D3EA0A087X179 549 aa13.54□□□□□ -0.24
VEGFA-219ENST00000518824 TBC1D3KA0A087X1G2 549 aa13.54□□□□□ -0.24
VEGFA-219ENST00000518824 A0A1W2PPC4 97 aa13.54□□□□□ -0.24
VEGFA-219ENST00000518824 TBC1D3FA6NER0 549 aaPredicted RBP13.54□□□□□ -0.24
VEGFA-219ENST00000518824 TBC1D3LB9A6J9 549 aa13.54□□□□□ -0.24
VEGFA-219ENST00000518824 AKR1B15C9JRZ8 316 aaPredicted RBP13.54□□□□□ -0.24
VEGFA-219ENST00000518824 C1QTNF3-AMACRE9PGA6 284 aa13.54□□□□□ -0.24
VEGFA-219ENST00000518824 FGF10O15520 208 aaPredicted RBP13.54□□□□□ -0.24
VEGFA-219ENST00000518824 AKR1B10O60218 316 aa13.54□□□□□ -0.24
VEGFA-219ENST00000518824 GJB3O75712 270 aa13.54□□□□□ -0.24
VEGFA-219ENST00000518824 H2AFZP0C0S5 128 aa13.54□□□□□ -0.24
VEGFA-219ENST00000518824 TBC1D3HP0C7X1 549 aa13.54□□□□□ -0.24
VEGFA-219ENST00000518824 GNSP15586 552 aa13.54□□□□□ -0.24
VEGFA-219ENST00000518824 IL4RP24394 825 aa13.54□□□□□ -0.24
VEGFA-219ENST00000518824 CD27P26842 260 aa13.54□□□□□ -0.24
VEGFA-219ENST00000518824 GJC1P36383 396 aa13.54□□□□□ -0.24
VEGFA-219ENST00000518824 DPP6P42658 865 aa13.54□□□□□ -0.24
VEGFA-219ENST00000518824 RGRP47804 291 aa13.54□□□□□ -0.24
VEGFA-219ENST00000518824 PAPOLAP51003 745 aaKnown RBP13.54□□□□□ -0.24
VEGFA-219ENST00000518824 YBEYP58557 167 aaPredicted RBP13.54□□□□□ -0.24
VEGFA-219ENST00000518824 DPYSL2Q16555 572 aa13.54□□□□□ -0.24
VEGFA-219ENST00000518824 PPM1JQ5JR12 505 aa13.54□□□□□ -0.24
VEGFA-219ENST00000518824 FAM46CQ5VWP2 391 aa13.54□□□□□ -0.24
VEGFA-219ENST00000518824 TBC1D3GQ6DHY5 549 aa13.54□□□□□ -0.24
VEGFA-219ENST00000518824 TBC1D3CQ6IPX1 549 aa13.54□□□□□ -0.24
VEGFA-219ENST00000518824 H2AFVQ71UI9 128 aa13.54□□□□□ -0.24
VEGFA-219ENST00000518824 POLNQ7Z5Q5 900 aa13.54□□□□□ -0.24
VEGFA-219ENST00000518824 DSG4Q86SJ6 1040 aa13.54□□□□□ -0.24
VEGFA-219ENST00000518824 TBC1D3Q8IZP1 549 aaPredicted RBP13.54□□□□□ -0.24
VEGFA-219ENST00000518824 TMIEQ8NEW7 156 aa13.54□□□□□ -0.24
VEGFA-219ENST00000518824 EXOC2Q96KP1 924 aa13.54□□□□□ -0.24
VEGFA-219ENST00000518824 NSMCE3Q96MG7 304 aa13.54□□□□□ -0.24
VEGFA-219ENST00000518824 HEPHQ9BQS7 1158 aa13.54□□□□□ -0.24
VEGFA-219ENST00000518824 DEF6Q9H4E7 631 aa13.54□□□□□ -0.24
VEGFA-219ENST00000518824 KLHL11Q9NVR0 708 aa13.54□□□□□ -0.24
VEGFA-219ENST00000518824 CTTNBP2NLQ9P2B4 639 aa13.54□□□□□ -0.24
VEGFA-219ENST00000518824 LRRC72A6NJI9 287 aa13.53□□□□□ -0.24
VEGFA-219ENST00000518824 TMEM110-MUSTN1A8MSY1 372 aa13.53□□□□□ -0.24
VEGFA-219ENST00000518824 MYO1FO00160 1098 aa13.53□□□□□ -0.24
VEGFA-219ENST00000518824 DAPK3O43293 454 aa13.53□□□□□ -0.24
VEGFA-219ENST00000518824 DESP17661 470 aa13.53□□□□□ -0.24
VEGFA-219ENST00000518824 ITIH2P19823 946 aa13.53□□□□□ -0.24
VEGFA-219ENST00000518824 SDHBP21912 280 aa13.53□□□□□ -0.24
VEGFA-219ENST00000518824 ETFBP38117 255 aa13.53□□□□□ -0.24
VEGFA-219ENST00000518824 ABL2P42684 1182 aa13.53□□□□□ -0.24
VEGFA-219ENST00000518824 SSR1P43307 286 aaKnown RBP13.53□□□□□ -0.24
VEGFA-219ENST00000518824 RECQLP46063 649 aaPredicted RBP13.53□□□□□ -0.24
VEGFA-219ENST00000518824 ARSEP51690 589 aa13.53□□□□□ -0.24
VEGFA-219ENST00000518824 ACAP1Q15027 740 aa13.53□□□□□ -0.24
VEGFA-219ENST00000518824 KIF19Q2TAC6 998 aa13.53□□□□□ -0.24
VEGFA-219ENST00000518824 PARP15Q460N3 678 aa13.53□□□□□ -0.24
VEGFA-219ENST00000518824 LRRC73Q5JTD7 316 aa13.53□□□□□ -0.24
VEGFA-219ENST00000518824 PRAMEF14Q5SWL7 426 aa13.53□□□□□ -0.24
VEGFA-219ENST00000518824 PARS2Q7L3T8 475 aaKnown RBP13.53□□□□□ -0.24
VEGFA-219ENST00000518824 RYBPQ8N488 228 aaPredicted RBP13.53□□□□□ -0.24
VEGFA-219ENST00000518824 OR2AP1Q8NGE2 309 aa13.53□□□□□ -0.24
VEGFA-219ENST00000518824 TSC1Q92574 1164 aa13.53□□□□□ -0.24
VEGFA-219ENST00000518824 ISG20Q96AZ6 181 aaKnown RBP13.53□□□□□ -0.24
VEGFA-219ENST00000518824 CAMK1GQ96NX5 476 aa13.53□□□□□ -0.24
VEGFA-219ENST00000518824 CSPG4P5Q96PW8 444 aa13.53□□□□□ -0.24
VEGFA-219ENST00000518824 ZNHIT6Q9NWK9 470 aaKnown RBP13.53□□□□□ -0.24
VEGFA-219ENST00000518824 SUSD2Q9UGT4 822 aa13.53□□□□□ -0.24
VEGFA-219ENST00000518824 GGT7Q9UJ14 662 aa13.53□□□□□ -0.24
VEGFA-219ENST00000518824 HPCAL4Q9UM19 191 aa13.53□□□□□ -0.24
VEGFA-219ENST00000518824 ZFR2Q9UPR6 939 aaKnown RBP13.53□□□□□ -0.24
VEGFA-219ENST00000518824 FNDC3AQ9Y2H6 1198 aaKnown RBP13.53□□□□□ -0.24
VEGFA-219ENST00000518824 FARP1Q9Y4F1 1045 aaPredicted RBP13.53□□□□□ -0.24
VEGFA-219ENST00000518824 SNX11Q9Y5W9 270 aa13.53□□□□□ -0.24
VEGFA-219ENST00000518824 CNOT1A5YKK6 2376 aaKnown RBP13.53□□□□□ -0.24
VEGFA-219ENST00000518824 A0A1W2PR77 199 aa13.52□□□□□ -0.25
VEGFA-219ENST00000518824 DFFAO00273 331 aa13.52□□□□□ -0.25
VEGFA-219ENST00000518824 KRIT1O00522 736 aa13.52□□□□□ -0.25
VEGFA-219ENST00000518824 MUSKO15146 869 aa13.52□□□□□ -0.25
VEGFA-219ENST00000518824 SPINT1O43278 529 aa13.52□□□□□ -0.25
VEGFA-219ENST00000518824 LATO43561 262 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms