RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 PIP4P1Q86T03 277 aa4.79□□□□□ -1.64
SQLE-202ENST00000518604 SERPINA11Q86U17 422 aa4.79□□□□□ -1.64
SQLE-202ENST00000518604 ZNF575Q86XF7 245 aa4.79□□□□□ -1.64
SQLE-202ENST00000518604 CAMK1DQ8IU85 385 aa4.79□□□□□ -1.64
SQLE-202ENST00000518604 ARFGAP1Q8N6T3 406 aa4.79□□□□□ -1.64
SQLE-202ENST00000518604 NANOGP1Q8N7R0 232 aa4.79□□□□□ -1.64
SQLE-202ENST00000518604 CMASQ8NFW8 434 aaPredicted RBP4.79□□□□□ -1.64
SQLE-202ENST00000518604 OR4N2Q8NGD1 307 aa4.79□□□□□ -1.64
SQLE-202ENST00000518604 BICD2Q8TD16 824 aa4.79□□□□□ -1.64
SQLE-202ENST00000518604 HDAC2Q92769 488 aaKnown RBP4.79□□□□□ -1.64
SQLE-202ENST00000518604 SKA1Q96BD8 255 aa4.79□□□□□ -1.64
SQLE-202ENST00000518604 ZNF419Q96HQ0 510 aaPredicted RBP4.79□□□□□ -1.64
SQLE-202ENST00000518604 C7orf26Q96N11 449 aa4.79□□□□□ -1.64
SQLE-202ENST00000518604 PDCL3Q9H2J4 239 aa4.79□□□□□ -1.64
SQLE-202ENST00000518604 FZD3Q9NPG1 666 aa4.79□□□□□ -1.64
SQLE-202ENST00000518604 KCND2Q9NZV8 630 aa4.79□□□□□ -1.64
SQLE-202ENST00000518604 MPP6Q9NZW5 540 aa4.79□□□□□ -1.64
SQLE-202ENST00000518604 SEL1LQ9UBV2 794 aa4.79□□□□□ -1.64
SQLE-202ENST00000518604 PCDHA12Q9UN75 941 aa4.79□□□□□ -1.64
SQLE-202ENST00000518604 HS3ST3B1Q9Y662 390 aa4.79□□□□□ -1.64
SQLE-202ENST00000518604 A0A096LPK6 155 aa4.78□□□□□ -1.64
SQLE-202ENST00000518604 A0A0A0MQY5 61 aa4.78□□□□□ -1.64
SQLE-202ENST00000518604 F5H0A9 414 aaPredicted RBP4.78□□□□□ -1.64
SQLE-202ENST00000518604 MDM4O15151 490 aa4.78□□□□□ -1.64
SQLE-202ENST00000518604 ZC3H11AO75152 810 aaKnown RBP eCLIP4.78□□□□□ -1.64
SQLE-202ENST00000518604 TOP3BO95985 862 aaKnown RBP4.78□□□□□ -1.64
SQLE-202ENST00000518604 MMP3P08254 477 aa4.78□□□□□ -1.64
SQLE-202ENST00000518604 ENO3P13929 434 aaPredicted RBP4.78□□□□□ -1.64
SQLE-202ENST00000518604 PTPN2P17706 415 aa4.78□□□□□ -1.64
SQLE-202ENST00000518604 TBXAS1P24557 533 aaPredicted RBP4.78□□□□□ -1.64
SQLE-202ENST00000518604 CENPAP49450 140 aa4.78□□□□□ -1.64
SQLE-202ENST00000518604 UFM1P61960 85 aa4.78□□□□□ -1.64
SQLE-202ENST00000518604 GAD2Q05329 585 aa4.78□□□□□ -1.64
SQLE-202ENST00000518604 MAPRE1Q15691 268 aaKnown RBP4.78□□□□□ -1.64
SQLE-202ENST00000518604 EDRF1Q3B7T1 1238 aa4.78□□□□□ -1.64
SQLE-202ENST00000518604 MANEAQ5SRI9 462 aa4.78□□□□□ -1.64
SQLE-202ENST00000518604 FAM69AQ5T7M9 428 aa4.78□□□□□ -1.64
SQLE-202ENST00000518604 TRAPPC11Q7Z392 1133 aa4.78□□□□□ -1.64
SQLE-202ENST00000518604 MAATS1Q7Z4T9 603 aa4.78□□□□□ -1.64
SQLE-202ENST00000518604 KDM1BQ8NB78 822 aa4.78□□□□□ -1.64
SQLE-202ENST00000518604 TMEM174Q8WUU8 243 aa4.78□□□□□ -1.64
SQLE-202ENST00000518604 B3GNT4Q9C0J1 378 aa4.78□□□□□ -1.64
SQLE-202ENST00000518604 CXorf56Q9H5V9 222 aa4.78□□□□□ -1.64
SQLE-202ENST00000518604 TAS2R10Q9NYW0 307 aa4.78□□□□□ -1.64
SQLE-202ENST00000518604 PEMTQ9UBM1 199 aa4.78□□□□□ -1.64
SQLE-202ENST00000518604 HEY2Q9UBP5 337 aa4.78□□□□□ -1.64
SQLE-202ENST00000518604 CDH22Q9UJ99 828 aa4.78□□□□□ -1.64
SQLE-202ENST00000518604 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.78□□□□□ -1.64
SQLE-202ENST00000518604 RAP2CQ9Y3L5 183 aa4.78□□□□□ -1.64
SQLE-202ENST00000518604 PCDHGB5Q9Y5G0 923 aa4.78□□□□□ -1.64
SQLE-202ENST00000518604 HSPB6O14558 160 aa4.77□□□□□ -1.65
SQLE-202ENST00000518604 SPTLC2O15270 562 aa4.77□□□□□ -1.65
SQLE-202ENST00000518604 CD4P01730 458 aa4.77□□□□□ -1.65
SQLE-202ENST00000518604 TNFAIP3P21580 790 aa4.77□□□□□ -1.65
SQLE-202ENST00000518604 TNFSF8P32971 234 aa4.77□□□□□ -1.65
SQLE-202ENST00000518604 PTGER1P34995 402 aa4.77□□□□□ -1.65
SQLE-202ENST00000518604 GGT5P36269 586 aa4.77□□□□□ -1.65
SQLE-202ENST00000518604 RASSF2P50749 326 aa4.77□□□□□ -1.65
SQLE-202ENST00000518604 PLCD1P51178 756 aa4.77□□□□□ -1.65
SQLE-202ENST00000518604 FOXD4Q12950 439 aaPredicted RBP4.77□□□□□ -1.65
SQLE-202ENST00000518604 TDGQ13569 410 aa4.77□□□□□ -1.65
SQLE-202ENST00000518604 RALBP1Q15311 655 aa4.77□□□□□ -1.65
SQLE-202ENST00000518604 ME3Q16798 604 aa4.77□□□□□ -1.65
SQLE-202ENST00000518604 UBAP2Q5T6F2 1119 aaKnown RBP4.77□□□□□ -1.65
SQLE-202ENST00000518604 ASPHD1Q5U4P2 390 aa4.77□□□□□ -1.65
SQLE-202ENST00000518604 ATG9BQ674R7 924 aa4.77□□□□□ -1.65
SQLE-202ENST00000518604 HMBOX1Q6NT76 420 aa4.77□□□□□ -1.65
SQLE-202ENST00000518604 TMEM81Q6P7N7 255 aa4.77□□□□□ -1.65
SQLE-202ENST00000518604 FAM83HQ6ZRV2 1179 aaPredicted RBP4.77□□□□□ -1.65
SQLE-202ENST00000518604 H1FNTQ75WM6 255 aaPredicted RBP4.77□□□□□ -1.65
SQLE-202ENST00000518604 TADA2BQ86TJ2 420 aa4.77□□□□□ -1.65
SQLE-202ENST00000518604 TRIM74Q86UV6 250 aa4.77□□□□□ -1.65
SQLE-202ENST00000518604 TRIM73Q86UV7 250 aa4.77□□□□□ -1.65
SQLE-202ENST00000518604 CHD1LQ86WJ1 897 aa4.77□□□□□ -1.65
SQLE-202ENST00000518604 FAM217AQ8IXS0 508 aa4.77□□□□□ -1.65
SQLE-202ENST00000518604 MMP21Q8N119 569 aa4.77□□□□□ -1.65
SQLE-202ENST00000518604 SAAL1Q96ER3 474 aa4.77□□□□□ -1.65
SQLE-202ENST00000518604 SLC32A1Q9H598 525 aa4.77□□□□□ -1.65
SQLE-202ENST00000518604 BABAM1Q9NWV8 329 aa4.77□□□□□ -1.65
SQLE-202ENST00000518604 TBC1D14Q9P2M4 693 aa4.77□□□□□ -1.65
SQLE-202ENST00000518604 KDM3AQ9Y4C1 1321 aa4.76□□□□□ -1.65
SQLE-202ENST00000518604 A0A087X0M5 115 aa4.76□□□□□ -1.65
SQLE-202ENST00000518604 A0A1B0GX30 115 aa4.76□□□□□ -1.65
SQLE-202ENST00000518604 A0A1W2PPH5 198 aa4.76□□□□□ -1.65
SQLE-202ENST00000518604 WDR91A4D1P6 747 aa4.76□□□□□ -1.65
SQLE-202ENST00000518604 PABPN1LA6NDY0 278 aaKnown RBP4.76□□□□□ -1.65
SQLE-202ENST00000518604 DNAJC9-AS1A6NH13 148 aa4.76□□□□□ -1.65
SQLE-202ENST00000518604 A6NNC1 897 aa4.76□□□□□ -1.65
SQLE-202ENST00000518604 EBAG9O00559 213 aa4.76□□□□□ -1.65
SQLE-202ENST00000518604 PPEF2O14830 753 aa4.76□□□□□ -1.65
SQLE-202ENST00000518604 MOSPD3O75425 235 aa4.76□□□□□ -1.65
SQLE-202ENST00000518604 RTN3O95197 1032 aaPredicted RBP4.76□□□□□ -1.65
SQLE-202ENST00000518604 CHRNB1P11230 501 aa4.76□□□□□ -1.65
SQLE-202ENST00000518604 CYP19A1P11511 503 aaPredicted RBP4.76□□□□□ -1.65
SQLE-202ENST00000518604 PRF1P14222 555 aa4.76□□□□□ -1.65
SQLE-202ENST00000518604 CD72P21854 359 aa4.76□□□□□ -1.65
SQLE-202ENST00000518604 PSMA4P25789 261 aaKnown RBP4.76□□□□□ -1.65
SQLE-202ENST00000518604 EPHA8P29322 1005 aaPredicted RBP4.76□□□□□ -1.65
SQLE-202ENST00000518604 FMO4P31512 558 aa4.76□□□□□ -1.65
SQLE-202ENST00000518604 ABCD1P33897 745 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms