RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 KRT1P04264 644 aa22.36■■□□□ 1.17
VEGFA-217ENST00000518538 TNNT1P13805 278 aa22.36■■□□□ 1.17
VEGFA-217ENST00000518538 MPLP40238 635 aa22.36■■□□□ 1.17
VEGFA-217ENST00000518538 METAP1P53582 386 aa22.36■■□□□ 1.17
VEGFA-217ENST00000518538 NAP1L1P55209 391 aaKnown RBP22.36■■□□□ 1.17
VEGFA-217ENST00000518538 RHOAP61586 193 aa22.36■■□□□ 1.17
VEGFA-217ENST00000518538 IL10RBQ08334 325 aa22.36■■□□□ 1.17
VEGFA-217ENST00000518538 SPEM2Q0P670 501 aa22.36■■□□□ 1.17
VEGFA-217ENST00000518538 KIF5AQ12840 1032 aa22.36■■□□□ 1.17
VEGFA-217ENST00000518538 PAFAH1B3Q15102 231 aaKnown RBP22.36■■□□□ 1.17
VEGFA-217ENST00000518538 ARHGAP36Q6ZRI8 547 aa22.36■■□□□ 1.17
VEGFA-217ENST00000518538 LRRC8AQ8IWT6 810 aa22.36■■□□□ 1.17
VEGFA-217ENST00000518538 GRIN3AQ8TCU5 1115 aa22.36■■□□□ 1.17
VEGFA-217ENST00000518538 FAM131CQ96AQ9 280 aa22.36■■□□□ 1.17
VEGFA-217ENST00000518538 GDAP1L1Q96MZ0 367 aa22.36■■□□□ 1.17
VEGFA-217ENST00000518538 WASF2Q9Y6W5 498 aa22.36■■□□□ 1.17
VEGFA-217ENST00000518538 GPR179Q6PRD1 2367 aa22.36■■□□□ 1.17
VEGFA-217ENST00000518538 MFSD11O43934 449 aa22.35■■□□□ 1.17
VEGFA-217ENST00000518538 LEFTY1O75610 366 aa22.35■■□□□ 1.17
VEGFA-217ENST00000518538 SEMA4FO95754 770 aa22.35■■□□□ 1.17
VEGFA-217ENST00000518538 DPP6P42658 865 aa22.35■■□□□ 1.17
VEGFA-217ENST00000518538 RFTN1Q14699 578 aaPredicted RBP22.35■■□□□ 1.17
VEGFA-217ENST00000518538 CYTH1Q15438 398 aa22.35■■□□□ 1.17
VEGFA-217ENST00000518538 ODF2Q5BJF6 829 aa22.35■■□□□ 1.17
VEGFA-217ENST00000518538 ARSIQ5FYB1 569 aa22.35■■□□□ 1.17
VEGFA-217ENST00000518538 GPR161Q8N6U8 529 aaKnown RBP22.35■■□□□ 1.17
VEGFA-217ENST00000518538 PQLC3Q8N755 202 aa22.35■■□□□ 1.17
VEGFA-217ENST00000518538 RNF157Q96PX1 679 aa22.35■■□□□ 1.17
VEGFA-217ENST00000518538 ZDHHC6Q9H6R6 413 aa22.35■■□□□ 1.17
VEGFA-217ENST00000518538 LHX3Q9UBR4 397 aa22.35■■□□□ 1.17
VEGFA-217ENST00000518538 OTOGLQ3ZCN5 2332 aa22.35■■□□□ 1.17
VEGFA-217ENST00000518538 NUP205Q92621 2012 aa22.35■■□□□ 1.17
VEGFA-217ENST00000518538 DMDP11532 3685 aa22.34■■□□□ 1.17
VEGFA-217ENST00000518538 ZFHX2Q9C0A1 2572 aaPredicted RBP22.34■■□□□ 1.17
VEGFA-217ENST00000518538 METTL12A8MUP2 240 aa22.34■■□□□ 1.17
VEGFA-217ENST00000518538 KPNA3O00505 521 aaPredicted RBP22.34■■□□□ 1.17
VEGFA-217ENST00000518538 SLC7A4O43246 635 aa22.34■■□□□ 1.17
VEGFA-217ENST00000518538 PALMO75781 387 aa22.34■■□□□ 1.17
VEGFA-217ENST00000518538 POP4O95707 220 aaKnown RBP22.34■■□□□ 1.17
VEGFA-217ENST00000518538 IGSF6O95976 241 aa22.34■■□□□ 1.17
VEGFA-217ENST00000518538 TGM1P22735 817 aa22.34■■□□□ 1.17
VEGFA-217ENST00000518538 IFI16Q16666 785 aaKnown RBP22.34■■□□□ 1.17
VEGFA-217ENST00000518538 POM121L1PQ3SYA9 428 aa22.34■■□□□ 1.17
VEGFA-217ENST00000518538 PLA2G2CQ5R387 149 aa22.34■■□□□ 1.17
VEGFA-217ENST00000518538 SYCP2LQ5T4T6 812 aa22.34■■□□□ 1.17
VEGFA-217ENST00000518538 ATXN7L2Q5T6C5 722 aaPredicted RBP22.34■■□□□ 1.17
VEGFA-217ENST00000518538 LRRC49Q8IUZ0 686 aa22.34■■□□□ 1.17
VEGFA-217ENST00000518538 RYBPQ8N488 228 aaPredicted RBP22.34■■□□□ 1.17
VEGFA-217ENST00000518538 ATPAF2Q8N5M1 289 aa22.34■■□□□ 1.17
VEGFA-217ENST00000518538 PPP1R16AQ96I34 528 aa22.34■■□□□ 1.17
VEGFA-217ENST00000518538 LRIG1Q96JA1 1093 aa22.34■■□□□ 1.17
VEGFA-217ENST00000518538 ZNF599Q96NL3 588 aa22.34■■□□□ 1.17
VEGFA-217ENST00000518538 PARD6AQ9NPB6 346 aa22.34■■□□□ 1.17
VEGFA-217ENST00000518538 SEMA4GQ9NTN9 838 aa22.34■■□□□ 1.17
VEGFA-217ENST00000518538 ADGRG1Q9Y653 693 aa22.34■■□□□ 1.17
VEGFA-217ENST00000518538 MAFKO60675 156 aa22.33■■□□□ 1.17
VEGFA-217ENST00000518538 ITPKAP23677 461 aa22.33■■□□□ 1.17
VEGFA-217ENST00000518538 HOXD12P35452 270 aa22.33■■□□□ 1.17
VEGFA-217ENST00000518538 ADPRHP54922 357 aa22.33■■□□□ 1.17
VEGFA-217ENST00000518538 CNTN1Q12860 1018 aa22.33■■□□□ 1.17
VEGFA-217ENST00000518538 CSRP2Q16527 193 aa22.33■■□□□ 1.17
VEGFA-217ENST00000518538 MYLK3Q32MK0 819 aa22.33■■□□□ 1.17
VEGFA-217ENST00000518538 TMCO4Q5TGY1 634 aa22.33■■□□□ 1.17
VEGFA-217ENST00000518538 AGBL4Q5VU57 503 aa22.33■■□□□ 1.17
VEGFA-217ENST00000518538 PEAR1Q5VY43 1037 aaPredicted RBP22.33■■□□□ 1.17
VEGFA-217ENST00000518538 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP22.33■■□□□ 1.17
VEGFA-217ENST00000518538 SYT12Q8IV01 421 aa22.33■■□□□ 1.17
VEGFA-217ENST00000518538 OR6K2Q8NGY2 324 aa22.33■■□□□ 1.17
VEGFA-217ENST00000518538 PIGKQ92643 395 aa22.33■■□□□ 1.17
VEGFA-217ENST00000518538 ARRDC3Q96B67 414 aa22.33■■□□□ 1.17
VEGFA-217ENST00000518538 RNF25Q96BH1 459 aaPredicted RBP22.33■■□□□ 1.17
VEGFA-217ENST00000518538 C6orf106Q9H6K1 298 aaPredicted RBP22.33■■□□□ 1.17
VEGFA-217ENST00000518538 DYRK4Q9NR20 520 aa22.33■■□□□ 1.17
VEGFA-217ENST00000518538 VPS45Q9NRW7 570 aa22.33■■□□□ 1.17
VEGFA-217ENST00000518538 TRIM10Q9UDY6 481 aa22.33■■□□□ 1.17
VEGFA-217ENST00000518538 PILRBQ9UKJ0 227 aa22.33■■□□□ 1.17
VEGFA-217ENST00000518538 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.33■■□□□ 1.17
VEGFA-217ENST00000518538 TNRC6BQ9UPQ9 1833 aaKnown RBP22.33■■□□□ 1.16
VEGFA-217ENST00000518538 USP34Q70CQ2 3546 aa22.33■■□□□ 1.16
VEGFA-217ENST00000518538 A0A0U1RQJ8 604 aa22.32■■□□□ 1.16
VEGFA-217ENST00000518538 LRRC72A6NJI9 287 aa22.32■■□□□ 1.16
VEGFA-217ENST00000518538 MEI4A8MW99 385 aa22.32■■□□□ 1.16
VEGFA-217ENST00000518538 RNF103O00237 685 aa22.32■■□□□ 1.16
VEGFA-217ENST00000518538 PLK4O00444 970 aa22.32■■□□□ 1.16
VEGFA-217ENST00000518538 KRIT1O00522 736 aa22.32■■□□□ 1.16
VEGFA-217ENST00000518538 ZNF806P0C7X5 589 aa22.32■■□□□ 1.16
VEGFA-217ENST00000518538 RAD51Q06609 339 aa22.32■■□□□ 1.16
VEGFA-217ENST00000518538 CCDC15Q0P6D6 951 aa22.32■■□□□ 1.16
VEGFA-217ENST00000518538 GALNT2Q10471 571 aa22.32■■□□□ 1.16
VEGFA-217ENST00000518538 CCDC6Q16204 474 aa22.32■■□□□ 1.16
VEGFA-217ENST00000518538 WDR45BQ5MNZ6 344 aa22.32■■□□□ 1.16
VEGFA-217ENST00000518538 DCAF12L1Q5VU92 463 aa22.32■■□□□ 1.16
VEGFA-217ENST00000518538 KATNAL2Q8IYT4 538 aa22.32■■□□□ 1.16
VEGFA-217ENST00000518538 LRRC57Q8N9N7 239 aa22.32■■□□□ 1.16
VEGFA-217ENST00000518538 OR2T34Q8NGX1 318 aa22.32■■□□□ 1.16
VEGFA-217ENST00000518538 OR14C36Q8NHC7 312 aa22.32■■□□□ 1.16
VEGFA-217ENST00000518538 KIAA1524Q8TCG1 905 aa22.32■■□□□ 1.16
VEGFA-217ENST00000518538 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.32■■□□□ 1.16
VEGFA-217ENST00000518538 CINPQ9BW66 212 aaPredicted RBP22.32■■□□□ 1.16
VEGFA-217ENST00000518538 OSBPL1AQ9BXW6 950 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms