RNA–Protein interactions for RNA: ENST00000518093.1

SH2D4A-203, Transcript of SH2 domain containing 4A, humanhuman

TSL 4

Gene SH2D4A, Length 569 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-203ENST00000518093 CST5P28325 142 aaPredicted RBP3.6□□□□□ -1.83
SH2D4A-203ENST00000518093 PNPLA4P41247 253 aa3.6□□□□□ -1.83
SH2D4A-203ENST00000518093 PTPN9P43378 593 aa3.6□□□□□ -1.83
SH2D4A-203ENST00000518093 MTNR1AP48039 350 aa3.6□□□□□ -1.83
SH2D4A-203ENST00000518093 AMTP48728 403 aa3.6□□□□□ -1.83
SH2D4A-203ENST00000518093 GAS1P54826 345 aa3.6□□□□□ -1.83
SH2D4A-203ENST00000518093 ARHGAP8P85298 464 aa3.6□□□□□ -1.83
SH2D4A-203ENST00000518093 GRSF1Q12849 480 aaKnown RBP eCLIP3.6□□□□□ -1.83
SH2D4A-203ENST00000518093 CHAF1AQ13111 956 aaPredicted RBP3.6□□□□□ -1.83
SH2D4A-203ENST00000518093 CUL4BQ13620 913 aa3.6□□□□□ -1.83
SH2D4A-203ENST00000518093 UBE4AQ14139 1066 aa3.6□□□□□ -1.83
SH2D4A-203ENST00000518093 MYBPC2Q14324 1141 aa3.6□□□□□ -1.83
SH2D4A-203ENST00000518093 ZNF484Q5JVG2 852 aa3.6□□□□□ -1.83
SH2D4A-203ENST00000518093 C8orf82Q6P1X6 216 aaPredicted RBP3.6□□□□□ -1.83
SH2D4A-203ENST00000518093 CCDC174Q6PII3 467 aa3.6□□□□□ -1.83
SH2D4A-203ENST00000518093 SPICE1Q8N0Z3 855 aa3.6□□□□□ -1.83
SH2D4A-203ENST00000518093 LINS1Q8NG48 757 aa3.6□□□□□ -1.83
SH2D4A-203ENST00000518093 TMEM163Q8TC26 289 aa3.6□□□□□ -1.83
SH2D4A-203ENST00000518093 GPT2Q8TD30 523 aa3.6□□□□□ -1.83
SH2D4A-203ENST00000518093 DNASE2BQ8WZ79 361 aa3.6□□□□□ -1.83
SH2D4A-203ENST00000518093 RUBCNQ92622 972 aa3.6□□□□□ -1.83
SH2D4A-203ENST00000518093 ATOH1Q92858 354 aaPredicted RBP3.6□□□□□ -1.83
SH2D4A-203ENST00000518093 TMEM18Q96B42 140 aa3.6□□□□□ -1.83
SH2D4A-203ENST00000518093 KTI12Q96EK9 354 aaPredicted RBP3.6□□□□□ -1.83
SH2D4A-203ENST00000518093 CHODLQ9H9P2 273 aa3.6□□□□□ -1.83
SH2D4A-203ENST00000518093 G6PC2Q9NQR9 355 aa3.6□□□□□ -1.83
SH2D4A-203ENST00000518093 OCIAD1Q9NX40 245 aa3.6□□□□□ -1.83
SH2D4A-203ENST00000518093 TAGLN3Q9UI15 199 aa3.6□□□□□ -1.83
SH2D4A-203ENST00000518093 SRPRBQ9Y5M8 271 aaKnown RBP3.6□□□□□ -1.83
SH2D4A-203ENST00000518093 UNC13AQ9UPW8 1703 aa3.6□□□□□ -1.83
SH2D4A-203ENST00000518093 LINC01553A4QN01 128 aa3.59□□□□□ -1.83
SH2D4A-203ENST00000518093 SEPT4O43236 478 aa3.59□□□□□ -1.83
SH2D4A-203ENST00000518093 STRNO43815 780 aa3.59□□□□□ -1.83
SH2D4A-203ENST00000518093 KCNJ13O60928 360 aa3.59□□□□□ -1.83
SH2D4A-203ENST00000518093 TFRCP02786 760 aaKnown RBP3.59□□□□□ -1.83
SH2D4A-203ENST00000518093 MMP3P08254 477 aa3.59□□□□□ -1.83
SH2D4A-203ENST00000518093 SEC61A1P61619 476 aaKnown RBP3.59□□□□□ -1.83
SH2D4A-203ENST00000518093 BNC1Q01954 994 aa3.59□□□□□ -1.83
SH2D4A-203ENST00000518093 TRAF2Q12933 501 aa3.59□□□□□ -1.83
SH2D4A-203ENST00000518093 THOC5Q13769 683 aaKnown RBP3.59□□□□□ -1.83
SH2D4A-203ENST00000518093 BYSLQ13895 437 aaKnown RBP3.59□□□□□ -1.83
SH2D4A-203ENST00000518093 IL13RA2Q14627 380 aa3.59□□□□□ -1.83
SH2D4A-203ENST00000518093 TUBB8Q3ZCM7 444 aa3.59□□□□□ -1.83
SH2D4A-203ENST00000518093 SH2D4BQ5SQS7 431 aa3.59□□□□□ -1.83
SH2D4A-203ENST00000518093 C9orf57Q5W0N0 161 aa3.59□□□□□ -1.83
SH2D4A-203ENST00000518093 SPSB3Q6PJ21 355 aa3.59□□□□□ -1.83
SH2D4A-203ENST00000518093 CREB3L2Q70SY1 520 aa3.59□□□□□ -1.83
SH2D4A-203ENST00000518093 RBFAQ8N0V3 343 aa3.59□□□□□ -1.83
SH2D4A-203ENST00000518093 NPFFR1Q9GZQ6 430 aa3.59□□□□□ -1.83
SH2D4A-203ENST00000518093 CTDSP1Q9GZU7 261 aa3.59□□□□□ -1.83
SH2D4A-203ENST00000518093 VPS33BQ9H267 617 aa3.59□□□□□ -1.83
SH2D4A-203ENST00000518093 GRHL1Q9NZI5 618 aa3.59□□□□□ -1.83
SH2D4A-203ENST00000518093 HDAC6Q9UBN7 1215 aa3.59□□□□□ -1.83
SH2D4A-203ENST00000518093 IGHV4-28A0A0C4DH34 117 aa3.58□□□□□ -1.84
SH2D4A-203ENST00000518093 A0A1B0GUV1 79 aa3.58□□□□□ -1.84
SH2D4A-203ENST00000518093 OR6C68A6NDL8 312 aa3.58□□□□□ -1.84
SH2D4A-203ENST00000518093 SMTNL1A8MU46 457 aa3.58□□□□□ -1.84
SH2D4A-203ENST00000518093 KDM4EB2RXH2 506 aaPredicted RBP3.58□□□□□ -1.84
SH2D4A-203ENST00000518093 FAM157AC9JC47 383 aa3.58□□□□□ -1.84
SH2D4A-203ENST00000518093 METTL18O95568 372 aa3.58□□□□□ -1.84
SH2D4A-203ENST00000518093 CKMT1AP12532 417 aa3.58□□□□□ -1.84
SH2D4A-203ENST00000518093 CD72P21854 359 aa3.58□□□□□ -1.84
SH2D4A-203ENST00000518093 YWHAQP27348 245 aa3.58□□□□□ -1.84
SH2D4A-203ENST00000518093 ERVFC1-1P60608 527 aa3.58□□□□□ -1.84
SH2D4A-203ENST00000518093 EEF1A2Q05639 463 aaKnown RBP3.58□□□□□ -1.84
SH2D4A-203ENST00000518093 COASYQ13057 564 aa3.58□□□□□ -1.84
SH2D4A-203ENST00000518093 CTTNQ14247 550 aaKnown RBP3.58□□□□□ -1.84
SH2D4A-203ENST00000518093 BRD3Q15059 726 aa3.58□□□□□ -1.84
SH2D4A-203ENST00000518093 FBXO43Q4G163 708 aa3.58□□□□□ -1.84
SH2D4A-203ENST00000518093 ZNF628Q5EBL2 1059 aa3.58□□□□□ -1.84
SH2D4A-203ENST00000518093 H1FNTQ75WM6 255 aaPredicted RBP3.58□□□□□ -1.84
SH2D4A-203ENST00000518093 CUZD1Q86UP6 607 aa3.58□□□□□ -1.84
SH2D4A-203ENST00000518093 SETD9Q8NE22 299 aa3.58□□□□□ -1.84
SH2D4A-203ENST00000518093 FAM216AQ8WUB2 273 aa3.58□□□□□ -1.84
SH2D4A-203ENST00000518093 RTP4Q96DX8 246 aa3.58□□□□□ -1.84
SH2D4A-203ENST00000518093 RBM17Q96I25 401 aaKnown RBP3.58□□□□□ -1.84
SH2D4A-203ENST00000518093 FIZ1Q96SL8 496 aa3.58□□□□□ -1.84
SH2D4A-203ENST00000518093 SLC25A33Q9BSK2 321 aa3.58□□□□□ -1.84
SH2D4A-203ENST00000518093 MSTO1Q9BUK6 570 aa3.58□□□□□ -1.84
SH2D4A-203ENST00000518093 C1QTNF4Q9BXJ3 329 aa3.58□□□□□ -1.84
SH2D4A-203ENST00000518093 IL25Q9H293 177 aa3.58□□□□□ -1.84
SH2D4A-203ENST00000518093 IGLV5-52A0A0A0MRZ9 124 aa3.57□□□□□ -1.84
SH2D4A-203ENST00000518093 SRRM3A6NNA2 597 aaPredicted RBP3.57□□□□□ -1.84
SH2D4A-203ENST00000518093 CAMTA2O94983 1202 aa3.57□□□□□ -1.84
SH2D4A-203ENST00000518093 IL1AP01583 271 aa3.57□□□□□ -1.84
SH2D4A-203ENST00000518093 VEGFAP15692 232 aaPredicted RBP3.57□□□□□ -1.84
SH2D4A-203ENST00000518093 CHKAP35790 457 aa3.57□□□□□ -1.84
SH2D4A-203ENST00000518093 GJC1P36383 396 aa3.57□□□□□ -1.84
SH2D4A-203ENST00000518093 AARSP49588 968 aaKnown RBP eCLIP3.57□□□□□ -1.84
SH2D4A-203ENST00000518093 MORC3Q14149 939 aa3.57□□□□□ -1.84
SH2D4A-203ENST00000518093 SLC39A14Q15043 492 aa3.57□□□□□ -1.84
SH2D4A-203ENST00000518093 HLFQ16534 295 aa3.57□□□□□ -1.84
SH2D4A-203ENST00000518093 FAM83BQ5T0W9 1011 aa3.57□□□□□ -1.84
SH2D4A-203ENST00000518093 NAPEPLDQ6IQ20 393 aa3.57□□□□□ -1.84
SH2D4A-203ENST00000518093 TMC8Q8IU68 726 aa3.57□□□□□ -1.84
SH2D4A-203ENST00000518093 GALNT15Q8N3T1 639 aa3.57□□□□□ -1.84
SH2D4A-203ENST00000518093 TCP11L2Q8N4U5 519 aa3.57□□□□□ -1.84
SH2D4A-203ENST00000518093 OR4N2Q8NGD1 307 aa3.57□□□□□ -1.84
SH2D4A-203ENST00000518093 RASSF8Q8NHQ8 419 aa3.57□□□□□ -1.84
SH2D4A-203ENST00000518093 WFIKKN2Q8TEU8 576 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms