RNA–Protein interactions for RNA: ENST00000516965.1

SNORA48.10-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 160 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.10-201ENST00000516965 SLC2A4P14672 509 aa4.41□□□□□ -1.7
SNORA48.10-201ENST00000516965 ZNF8P17098 575 aaPredicted RBP4.41□□□□□ -1.7
SNORA48.10-201ENST00000516965 CIITAP33076 1130 aa4.41□□□□□ -1.7
SNORA48.10-201ENST00000516965 HOXD13P35453 343 aa4.41□□□□□ -1.7
SNORA48.10-201ENST00000516965 CLCNKBP51801 687 aa4.41□□□□□ -1.7
SNORA48.10-201ENST00000516965 ARSFP54793 590 aa4.41□□□□□ -1.7
SNORA48.10-201ENST00000516965 OLR1P78380 273 aa4.41□□□□□ -1.7
SNORA48.10-201ENST00000516965 NUCB1Q02818 461 aa4.41□□□□□ -1.7
SNORA48.10-201ENST00000516965 DPTQ07507 201 aa4.41□□□□□ -1.7
SNORA48.10-201ENST00000516965 VEPH1Q14D04 833 aa4.41□□□□□ -1.7
SNORA48.10-201ENST00000516965 PGM5Q15124 567 aa4.41□□□□□ -1.7
SNORA48.10-201ENST00000516965 ME3Q16798 604 aa4.41□□□□□ -1.7
SNORA48.10-201ENST00000516965 ALG10Q5BKT4 473 aa4.41□□□□□ -1.7
SNORA48.10-201ENST00000516965 RILPL1Q5EBL4 403 aa4.41□□□□□ -1.7
SNORA48.10-201ENST00000516965 ALG10BQ5I7T1 473 aa4.41□□□□□ -1.7
SNORA48.10-201ENST00000516965 ATG9BQ674R7 924 aa4.41□□□□□ -1.7
SNORA48.10-201ENST00000516965 ISM2Q6H9L7 571 aa4.41□□□□□ -1.7
SNORA48.10-201ENST00000516965 FRMD1Q8N878 549 aa4.41□□□□□ -1.7
SNORA48.10-201ENST00000516965 C8orf58Q8NAV2 365 aa4.41□□□□□ -1.7
SNORA48.10-201ENST00000516965 GPR150Q8NGU9 434 aa4.41□□□□□ -1.7
SNORA48.10-201ENST00000516965 HDAC7Q8WUI4 952 aa4.41□□□□□ -1.7
SNORA48.10-201ENST00000516965 FAM149B1Q96BN6 582 aa4.41□□□□□ -1.7
SNORA48.10-201ENST00000516965 INTS12Q96CB8 462 aaKnown RBP4.41□□□□□ -1.7
SNORA48.10-201ENST00000516965 HEMGNQ9BXL5 484 aa4.41□□□□□ -1.7
SNORA48.10-201ENST00000516965 ZNF304Q9HCX3 659 aa4.41□□□□□ -1.7
SNORA48.10-201ENST00000516965 SEPT11Q9NVA2 429 aaKnown RBP4.41□□□□□ -1.7
SNORA48.10-201ENST00000516965 HCFC1R1Q9NWW0 138 aa4.41□□□□□ -1.7
SNORA48.10-201ENST00000516965 CLIC5Q9NZA1 410 aa4.41□□□□□ -1.7
SNORA48.10-201ENST00000516965 TBC1D29Q9UFV1 150 aa4.41□□□□□ -1.7
SNORA48.10-201ENST00000516965 POLG2Q9UHN1 485 aa4.41□□□□□ -1.7
SNORA48.10-201ENST00000516965 NRBP1Q9UHY1 535 aa4.41□□□□□ -1.7
SNORA48.10-201ENST00000516965 CDH22Q9UJ99 828 aa4.41□□□□□ -1.7
SNORA48.10-201ENST00000516965 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.41□□□□□ -1.7
SNORA48.10-201ENST00000516965 TTLL3Q9Y4R7 772 aa4.41□□□□□ -1.7
SNORA48.10-201ENST00000516965 C2CD4BA6NLJ0 364 aa4.4□□□□□ -1.71
SNORA48.10-201ENST00000516965 LRRC53A6NM62 1247 aa4.4□□□□□ -1.71
SNORA48.10-201ENST00000516965 LINC01548A6NM66 108 aa4.4□□□□□ -1.71
SNORA48.10-201ENST00000516965 EIF3CLB5ME19 914 aaKnown RBP4.4□□□□□ -1.71
SNORA48.10-201ENST00000516965 RHODO00212 210 aa4.4□□□□□ -1.71
SNORA48.10-201ENST00000516965 TSPAN9O75954 239 aa4.4□□□□□ -1.71
SNORA48.10-201ENST00000516965 NEURL1O76050 574 aa4.4□□□□□ -1.71
SNORA48.10-201ENST00000516965 TMCC1O94876 653 aa4.4□□□□□ -1.71
SNORA48.10-201ENST00000516965 IGLV2-14P01704 120 aa4.4□□□□□ -1.71
SNORA48.10-201ENST00000516965 CDH2P19022 906 aaPredicted RBP4.4□□□□□ -1.71
SNORA48.10-201ENST00000516965 MAPK4P31152 587 aa4.4□□□□□ -1.71
SNORA48.10-201ENST00000516965 ICAM3P32942 547 aa4.4□□□□□ -1.71
SNORA48.10-201ENST00000516965 PPARGP37231 505 aaPredicted RBP4.4□□□□□ -1.71
SNORA48.10-201ENST00000516965 GABRB2P47870 512 aa4.4□□□□□ -1.71
SNORA48.10-201ENST00000516965 ELLP55199 621 aaPredicted RBP4.4□□□□□ -1.71
SNORA48.10-201ENST00000516965 PMPCAQ10713 525 aa4.4□□□□□ -1.71
SNORA48.10-201ENST00000516965 TMEM115Q12893 351 aaPredicted RBP4.4□□□□□ -1.71
SNORA48.10-201ENST00000516965 STIM1Q13586 685 aa4.4□□□□□ -1.71
SNORA48.10-201ENST00000516965 DPCR1Q3MIW9 517 aa4.4□□□□□ -1.71
SNORA48.10-201ENST00000516965 AAGABQ6PD74 315 aa4.4□□□□□ -1.71
SNORA48.10-201ENST00000516965 C16orf54Q6UWD8 224 aa4.4□□□□□ -1.71
SNORA48.10-201ENST00000516965 MOB3CQ70IA8 216 aa4.4□□□□□ -1.71
SNORA48.10-201ENST00000516965 GPAT4Q86UL3 456 aa4.4□□□□□ -1.71
SNORA48.10-201ENST00000516965 FAM185AQ8N0U4 392 aa4.4□□□□□ -1.71
SNORA48.10-201ENST00000516965 TTC39CQ8N584 583 aa4.4□□□□□ -1.71
SNORA48.10-201ENST00000516965 DPP10Q8N608 796 aa4.4□□□□□ -1.71
SNORA48.10-201ENST00000516965 SEMA6DQ8NFY4 1073 aa4.4□□□□□ -1.71
SNORA48.10-201ENST00000516965 NEK9Q8TD19 979 aa4.4□□□□□ -1.71
SNORA48.10-201ENST00000516965 HASPINQ8TF76 798 aa4.4□□□□□ -1.71
SNORA48.10-201ENST00000516965 SCFD2Q8WU76 684 aa4.4□□□□□ -1.71
SNORA48.10-201ENST00000516965 TMEM170AQ8WVE7 144 aa4.4□□□□□ -1.71
SNORA48.10-201ENST00000516965 POMGNT1Q8WZA1 660 aa4.4□□□□□ -1.71
SNORA48.10-201ENST00000516965 KAT2AQ92830 837 aa4.4□□□□□ -1.71
SNORA48.10-201ENST00000516965 NSUN4Q96CB9 384 aaKnown RBP4.4□□□□□ -1.71
SNORA48.10-201ENST00000516965 FAM118BQ9BPY3 351 aa4.4□□□□□ -1.71
SNORA48.10-201ENST00000516965 H2AFJQ9BTM1 129 aa4.4□□□□□ -1.71
SNORA48.10-201ENST00000516965 ZNF70Q9UC06 446 aaPredicted RBP4.4□□□□□ -1.71
SNORA48.10-201ENST00000516965 CORO1CQ9ULV4 474 aaPredicted RBP4.4□□□□□ -1.71
SNORA48.10-201ENST00000516965 A4GNTQ9UNA3 340 aa4.4□□□□□ -1.71
SNORA48.10-201ENST00000516965 LAMP3Q9UQV4 416 aa4.4□□□□□ -1.71
SNORA48.10-201ENST00000516965 DMRT1Q9Y5R6 373 aa4.4□□□□□ -1.71
SNORA48.10-201ENST00000516965 AOX1Q06278 1338 aa4.4□□□□□ -1.71
SNORA48.10-201ENST00000516965 WDR33Q9C0J8 1336 aaKnown RBP4.4□□□□□ -1.71
SNORA48.10-201ENST00000516965 MST1RQ04912 1400 aa4.39□□□□□ -1.71
SNORA48.10-201ENST00000516965 A0A0A0MQY5 61 aa4.39□□□□□ -1.71
SNORA48.10-201ENST00000516965 LIPT2A6NK58 231 aa4.39□□□□□ -1.71
SNORA48.10-201ENST00000516965 FAM157AC9JC47 383 aa4.39□□□□□ -1.71
SNORA48.10-201ENST00000516965 PTGES3LE9PB15 166 aa4.39□□□□□ -1.71
SNORA48.10-201ENST00000516965 F8W810 466 aa4.39□□□□□ -1.71
SNORA48.10-201ENST00000516965 RNMTO43148 476 aaKnown RBP4.39□□□□□ -1.71
SNORA48.10-201ENST00000516965 HNRNPCL1O60812 293 aaKnown RBP4.39□□□□□ -1.71
SNORA48.10-201ENST00000516965 TMCC2O75069 709 aa4.39□□□□□ -1.71
SNORA48.10-201ENST00000516965 C1QL1O75973 258 aa4.39□□□□□ -1.71
SNORA48.10-201ENST00000516965 EIF2S1P05198 315 aaKnown RBP4.39□□□□□ -1.71
SNORA48.10-201ENST00000516965 PTPN2P17706 415 aa4.39□□□□□ -1.71
SNORA48.10-201ENST00000516965 PTGER1P34995 402 aa4.39□□□□□ -1.71
SNORA48.10-201ENST00000516965 MC1RQ01726 317 aa4.39□□□□□ -1.71
SNORA48.10-201ENST00000516965 CREB5Q02930 508 aa4.39□□□□□ -1.71
SNORA48.10-201ENST00000516965 TFF2Q03403 129 aa4.39□□□□□ -1.71
SNORA48.10-201ENST00000516965 SLC10A2Q12908 348 aaPredicted RBP4.39□□□□□ -1.71
SNORA48.10-201ENST00000516965 WTAPQ15007 396 aa4.39□□□□□ -1.71
SNORA48.10-201ENST00000516965 MED22Q15528 200 aa4.39□□□□□ -1.71
SNORA48.10-201ENST00000516965 HIST2H2ACQ16777 129 aaPredicted RBP4.39□□□□□ -1.71
SNORA48.10-201ENST00000516965 SLC9C1Q4G0N8 1177 aa4.39□□□□□ -1.71
SNORA48.10-201ENST00000516965 EARS2Q5JPH6 523 aaKnown RBP4.39□□□□□ -1.71
SNORA48.10-201ENST00000516965 TTC39AQ5SRH9 613 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms