RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 TRIM29Q14134 588 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 MAP7Q14244 749 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 ZNF234Q14588 700 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 KCNB1Q14721 858 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 SAFBQ15424 915 aaKnown RBP eCLIP3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 HNRNPA1L2Q32P51 320 aaKnown RBP3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 ZACNQ401N2 412 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 MTERF2Q49AM1 385 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 MAP9Q49MG5 647 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 CEP55Q53EZ4 464 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 WIPI1Q5MNZ9 446 aaPredicted RBP3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 PPP4R3AQ6IN85 833 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 FBXO42Q6P3S6 717 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 USP17L6PQ6QN14 398 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 MOXD1Q6UVY6 613 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 ARSKQ6UWY0 536 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 ADAMTSL5Q6ZMM2 481 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 HEATR3Q7Z4Q2 680 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 ANKS1BQ7Z6G8 1248 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 LMNTD1Q8N9Z9 388 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 RBBP8NLQ8NC74 664 aaPredicted RBP3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 STKLD1Q8NE28 680 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 APPL2Q8NEU8 664 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 MYRIPQ8NFW9 859 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 SEMA6DQ8NFY4 1073 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 FBXO18Q8NFZ0 1043 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 KBTBD7Q8WVZ9 684 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 CRYGNQ8WXF5 182 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 TM9SF4Q92544 642 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 DDX12PQ92771 950 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 PIGTQ969N2 578 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 TRIM44Q96DX7 344 aaPredicted RBP3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 TMX3Q96JJ7 454 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 SUSD3Q96L08 255 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 CCDC74BQ96LY2 380 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 SPATA13Q96N96 652 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 PPP1R10Q96QC0 940 aaKnown RBP3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 WDR77Q9BQA1 342 aaPredicted RBP3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 CCDC94Q9BW85 323 aaPredicted RBP3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 SLC26A6Q9BXS9 759 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 ACTL8Q9H568 366 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 RDH14Q9HBH5 336 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 AGO4Q9HCK5 861 aaKnown RBP3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 BRMS1Q9HCU9 246 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 NRBP2Q9NSY0 501 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 ARHGAP20Q9P2F6 1191 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 ORC3Q9UBD5 711 aaPredicted RBP3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 NAP1L2Q9ULW6 460 aaPredicted RBP3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 PCDHA6Q9UN73 950 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 PCDHA4Q9UN74 947 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 R3HCC1Q9Y3T6 440 aaKnown RBP3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 PTGDR2Q9Y5Y4 395 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 IGHV5-10-1A0A0J9YXX1 117 aa3.27□□□□□ -1.89
SCARNA13-201ENST00000516672 OR6C75A6NL08 312 aa3.27□□□□□ -1.89
SCARNA13-201ENST00000516672 LATO43561 262 aa3.27□□□□□ -1.89
SCARNA13-201ENST00000516672 OAZ2O95190 189 aa3.27□□□□□ -1.89
SCARNA13-201ENST00000516672 STATHP02808 62 aa3.27□□□□□ -1.89
SCARNA13-201ENST00000516672 OATP04181 439 aa3.27□□□□□ -1.89
SCARNA13-201ENST00000516672 ALPPP05187 535 aa3.27□□□□□ -1.89
SCARNA13-201ENST00000516672 CISD3P0C7P0 127 aa3.27□□□□□ -1.89
SCARNA13-201ENST00000516672 UNGP13051 313 aaPredicted RBP3.27□□□□□ -1.89
SCARNA13-201ENST00000516672 FDPSP14324 419 aaKnown RBP3.27□□□□□ -1.89
SCARNA13-201ENST00000516672 GCFC2P16383 781 aaKnown RBP3.27□□□□□ -1.89
SCARNA13-201ENST00000516672 ARF4P18085 180 aaPredicted RBP3.27□□□□□ -1.89
SCARNA13-201ENST00000516672 ACO1P21399 889 aaKnown RBP3.27□□□□□ -1.89
SCARNA13-201ENST00000516672 MAT2AP31153 395 aaKnown RBP3.27□□□□□ -1.89
SCARNA13-201ENST00000516672 EPHB1P54762 984 aa3.27□□□□□ -1.89
SCARNA13-201ENST00000516672 MLF1P58340 268 aa3.27□□□□□ -1.89
SCARNA13-201ENST00000516672 NLRP5P59047 1200 aa3.27□□□□□ -1.89
SCARNA13-201ENST00000516672 SETQ01105 290 aaPredicted RBP3.27□□□□□ -1.89
SCARNA13-201ENST00000516672 YWHAHQ04917 246 aaPredicted RBP3.27□□□□□ -1.89
SCARNA13-201ENST00000516672 PTK2Q05397 1052 aa3.27□□□□□ -1.89
SCARNA13-201ENST00000516672 STK3Q13188 491 aa3.27□□□□□ -1.89
SCARNA13-201ENST00000516672 DMP1Q13316 513 aaPredicted RBP3.27□□□□□ -1.89
SCARNA13-201ENST00000516672 CAMK2GQ13555 558 aaPredicted RBP3.27□□□□□ -1.89
SCARNA13-201ENST00000516672 DNASE1L3Q13609 305 aa3.27□□□□□ -1.89
SCARNA13-201ENST00000516672 IL10RAQ13651 578 aa3.27□□□□□ -1.89
SCARNA13-201ENST00000516672 ZNF169Q14929 603 aaPredicted RBP3.27□□□□□ -1.89
SCARNA13-201ENST00000516672 PCBP1Q15365 356 aaKnown RBP eCLIP3.27□□□□□ -1.89
SCARNA13-201ENST00000516672 MGAT5BQ3V5L5 792 aa3.27□□□□□ -1.89
SCARNA13-201ENST00000516672 Q4G0T1 1027 aa3.27□□□□□ -1.89
SCARNA13-201ENST00000516672 CAVIN1Q6NZI2 390 aaKnown RBP3.27□□□□□ -1.89
SCARNA13-201ENST00000516672 CEACAM20Q6UY09 585 aa3.27□□□□□ -1.89
SCARNA13-201ENST00000516672 PRPF39Q86UA1 669 aaKnown RBP3.27□□□□□ -1.89
SCARNA13-201ENST00000516672 CDR2LQ86X02 465 aaPredicted RBP3.27□□□□□ -1.89
SCARNA13-201ENST00000516672 TMEM25Q86YD3 366 aa3.27□□□□□ -1.89
SCARNA13-201ENST00000516672 BLIDQ8IZY5 108 aa3.27□□□□□ -1.89
SCARNA13-201ENST00000516672 AGBL5Q8NDL9 886 aa3.27□□□□□ -1.89
SCARNA13-201ENST00000516672 OR13H1Q8NG92 308 aa3.27□□□□□ -1.89
SCARNA13-201ENST00000516672 LILRB4Q8NHJ6 448 aa3.27□□□□□ -1.89
SCARNA13-201ENST00000516672 MUC7Q8TAX7 377 aa3.27□□□□□ -1.89
SCARNA13-201ENST00000516672 PHF10Q8WUB8 498 aaKnown RBP3.27□□□□□ -1.89
SCARNA13-201ENST00000516672 SEC14L1Q92503 715 aa3.27□□□□□ -1.89
SCARNA13-201ENST00000516672 IFT43Q96FT9 208 aa3.27□□□□□ -1.89
SCARNA13-201ENST00000516672 LMLNQ96KR4 655 aa3.27□□□□□ -1.89
SCARNA13-201ENST00000516672 RIT2Q99578 217 aa3.27□□□□□ -1.89
SCARNA13-201ENST00000516672 WDR83Q9BRX9 315 aaKnown RBP3.27□□□□□ -1.89
SCARNA13-201ENST00000516672 GATA5Q9BWX5 397 aaPredicted RBP3.27□□□□□ -1.89
SCARNA13-201ENST00000516672 NEUROG2Q9H2A3 272 aa3.27□□□□□ -1.89
SCARNA13-201ENST00000516672 FOXP1Q9H334 677 aaPredicted RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms