RNA–Protein interactions for RNA: ENST00000516400.1

RNU1-48P-201, Transcript of RNA, U1 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU1-48P, Length 162 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-48P-201ENST00000516400 RAB15P59190 212 aa2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 SRSF2Q01130 221 aaKnown RBP2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 MYL7Q01449 175 aa2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 ELOAQ14241 798 aaKnown RBP2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 LLGL1Q15334 1064 aa2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 ZNF568Q3ZCX4 644 aa2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 PRRT3Q5FWE3 981 aa2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 FSCBQ5H9T9 825 aa2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 PRR31Q5SQ13 230 aa2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 DCAF12Q5T6F0 453 aa2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 SEL1L3Q68CR1 1132 aa2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 PPP4R3AQ6IN85 833 aa2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 RPUSD3Q6P087 351 aaKnown RBP2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 SLC39A4Q6P5W5 647 aa2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 Q6ZPB1 254 aaPredicted RBP2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 CHST9Q7L1S5 443 aa2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 SCD5Q86SK9 330 aa2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 PIM3Q86V86 326 aa2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 SFR1Q86XK3 245 aa2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 CATSPER3Q86XQ3 398 aa2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 ITPRIPQ8IWB1 547 aa2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 ZBTB8OSQ8IWT0 167 aa2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 TPH2Q8IWU9 490 aa2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 NUP93Q8N1F7 819 aa2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 MCUQ8NE86 351 aa2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 OR6C4Q8NGE1 309 aa2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 OR4D9Q8NGE8 314 aa2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 PCDH19Q8TAB3 1148 aa2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 MYCBPAPQ8TBZ2 947 aa2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 THAP4Q8WY91 577 aa2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 HVCN1Q96D96 273 aa2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 MYEOVQ96EZ4 313 aa2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 CCDC74BQ96LY2 380 aa2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 TEFMQ96QE5 360 aaKnown RBP2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 DMRTA2Q96SC8 542 aa2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 CTRCQ99895 268 aa2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 OMDQ99983 421 aa2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 PYM1Q9BRP8 204 aaKnown RBP2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 CALN1Q9BXU9 219 aa2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 CIPCQ9C0C6 399 aa2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 TRIT1Q9H3H1 467 aaKnown RBP2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 PLEKHF2Q9H8W4 249 aa2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 KMT5AQ9NQR1 393 aa2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 UTP3Q9NQZ2 479 aaKnown RBP eCLIP2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 MTPAPQ9NVV4 582 aaKnown RBP eCLIP2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 SLC39A1Q9NY26 324 aa2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 TMEM63CQ9P1W3 806 aa2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 MAGEC2Q9UBF1 373 aaPredicted RBP2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 KCNN3Q9UGI6 736 aa2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 VPS51Q9UID3 782 aa2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 TSR3Q9UJK0 312 aaKnown RBP2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 TINAGQ9UJW2 476 aa2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 AJAP1Q9UKB5 411 aaPredicted RBP2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 PLA2G4CQ9UP65 541 aa2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 DERAQ9Y315 318 aa2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 GTF3C5Q9Y5Q8 519 aaPredicted RBP2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 DNAJC13O75165 2243 aa2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 CADP27708 2225 aa2.4□□□□□ -2.03
RNU1-48P-201ENST00000516400 NOTCH3Q9UM47 2321 aa2.39□□□□□ -2.03
RNU1-48P-201ENST00000516400 IGHV1OR21-1A0A087WYE8 117 aa2.39□□□□□ -2.03
RNU1-48P-201ENST00000516400 CCDC78A2IDD5 438 aa2.39□□□□□ -2.03
RNU1-48P-201ENST00000516400 ARGFXA6NJG6 315 aa2.39□□□□□ -2.03
RNU1-48P-201ENST00000516400 A6NNZ2 444 aa2.39□□□□□ -2.03
RNU1-48P-201ENST00000516400 H7C1Q1 480 aa2.39□□□□□ -2.03
RNU1-48P-201ENST00000516400 WNT7AO00755 349 aa2.39□□□□□ -2.03
RNU1-48P-201ENST00000516400 FANCGO15287 622 aa2.39□□□□□ -2.03
RNU1-48P-201ENST00000516400 PPM1DO15297 605 aa2.39□□□□□ -2.03
RNU1-48P-201ENST00000516400 TLR5O60602 858 aa2.39□□□□□ -2.03
RNU1-48P-201ENST00000516400 MED24O75448 989 aa2.39□□□□□ -2.03
RNU1-48P-201ENST00000516400 ZNF821O75541 412 aaPredicted RBP2.39□□□□□ -2.03
RNU1-48P-201ENST00000516400 SLCO2B1O94956 709 aa2.39□□□□□ -2.03
RNU1-48P-201ENST00000516400 ZNF202O95125 648 aa2.39□□□□□ -2.03
RNU1-48P-201ENST00000516400 CD2BP2O95400 341 aaKnown RBP2.39□□□□□ -2.03
RNU1-48P-201ENST00000516400 PAK4O96013 591 aaPredicted RBP2.39□□□□□ -2.03
RNU1-48P-201ENST00000516400 ADH1BP00325 375 aa2.39□□□□□ -2.03
RNU1-48P-201ENST00000516400 FUCA1P04066 466 aa2.39□□□□□ -2.03
RNU1-48P-201ENST00000516400 VSIG8P0DPA2 414 aa2.39□□□□□ -2.03
RNU1-48P-201ENST00000516400 CD53P19397 219 aa2.39□□□□□ -2.03
RNU1-48P-201ENST00000516400 MX1P20591 662 aa2.39□□□□□ -2.03
RNU1-48P-201ENST00000516400 MPSTP25325 297 aa2.39□□□□□ -2.03
RNU1-48P-201ENST00000516400 MST1P26927 711 aa2.39□□□□□ -2.03
RNU1-48P-201ENST00000516400 YWHAQP27348 245 aa2.39□□□□□ -2.03
RNU1-48P-201ENST00000516400 MSX1P28360 303 aa2.39□□□□□ -2.03
RNU1-48P-201ENST00000516400 ADD1P35611 737 aaKnown RBP2.39□□□□□ -2.03
RNU1-48P-201ENST00000516400 CHKAP35790 457 aa2.39□□□□□ -2.03
RNU1-48P-201ENST00000516400 STAT1P42224 750 aa2.39□□□□□ -2.03
RNU1-48P-201ENST00000516400 CHRNA4P43681 627 aa2.39□□□□□ -2.03
RNU1-48P-201ENST00000516400 PLA2G4AP47712 749 aa2.39□□□□□ -2.03
RNU1-48P-201ENST00000516400 TAF6P49848 677 aa2.39□□□□□ -2.03
RNU1-48P-201ENST00000516400 COPB1P53618 953 aaKnown RBP2.39□□□□□ -2.03
RNU1-48P-201ENST00000516400 PDE1AP54750 535 aa2.39□□□□□ -2.03
RNU1-48P-201ENST00000516400 DLX5P56178 289 aa2.39□□□□□ -2.03
RNU1-48P-201ENST00000516400 RPS18P62269 152 aaKnown RBP2.39□□□□□ -2.03
RNU1-48P-201ENST00000516400 TSPY1Q01534 308 aa2.39□□□□□ -2.03
RNU1-48P-201ENST00000516400 EXOSC10Q01780 885 aaKnown RBP2.39□□□□□ -2.03
RNU1-48P-201ENST00000516400 E2F5Q15329 346 aa2.39□□□□□ -2.03
RNU1-48P-201ENST00000516400 ASIC2Q16515 512 aa2.39□□□□□ -2.03
RNU1-48P-201ENST00000516400 EDRF1Q3B7T1 1238 aa2.39□□□□□ -2.03
RNU1-48P-201ENST00000516400 PLA2G4EQ3MJ16 856 aa2.39□□□□□ -2.03
RNU1-48P-201ENST00000516400 FAM174BQ3ZCQ3 159 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms