RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 SLFN11Q7Z7L1 901 aa17.82■□□□□ 0.44
DDX41-217ENST00000515562 SPATS2Q86XZ4 545 aaKnown RBP17.82■□□□□ 0.44
DDX41-217ENST00000515562 PLPP6Q8IY26 295 aa17.82■□□□□ 0.44
DDX41-217ENST00000515562 ARHGEF2Q92974 986 aaKnown RBP17.82■□□□□ 0.44
DDX41-217ENST00000515562 CNDP2Q96KP4 475 aaKnown RBP17.82■□□□□ 0.44
DDX41-217ENST00000515562 BPIFA3Q9BQP9 254 aa17.82■□□□□ 0.44
DDX41-217ENST00000515562 NDFIP2Q9NV92 336 aa17.82■□□□□ 0.44
DDX41-217ENST00000515562 DNAI1Q9UI46 699 aa17.82■□□□□ 0.44
DDX41-217ENST00000515562 MYO6Q9UM54 1294 aa17.82■□□□□ 0.44
DDX41-217ENST00000515562 FCF1Q9Y324 198 aaKnown RBP17.82■□□□□ 0.44
DDX41-217ENST00000515562 PCDHGA1Q9Y5H4 931 aa17.82■□□□□ 0.44
DDX41-217ENST00000515562 TCRBV5S1A1TA0A578 114 aa17.81■□□□□ 0.44
DDX41-217ENST00000515562 ZSCAN5CA6NGD5 496 aaPredicted RBP17.81■□□□□ 0.44
DDX41-217ENST00000515562 FAM72CH0Y354 149 aa17.81■□□□□ 0.44
DDX41-217ENST00000515562 ENC1O14682 589 aa17.81■□□□□ 0.44
DDX41-217ENST00000515562 SLC31A1O15431 190 aa17.81■□□□□ 0.44
DDX41-217ENST00000515562 CCP110O43303 1012 aa17.81■□□□□ 0.44
DDX41-217ENST00000515562 PCDH8O95206 1070 aa17.81■□□□□ 0.44
DDX41-217ENST00000515562 CDK4P11802 303 aa17.81■□□□□ 0.44
DDX41-217ENST00000515562 ATP1A3P13637 1013 aa17.81■□□□□ 0.44
DDX41-217ENST00000515562 ADRB3P13945 408 aa17.81■□□□□ 0.44
DDX41-217ENST00000515562 PRLRP16471 622 aa17.81■□□□□ 0.44
DDX41-217ENST00000515562 AKT2P31751 481 aa17.81■□□□□ 0.44
DDX41-217ENST00000515562 L1CAMP32004 1257 aa17.81■□□□□ 0.44
DDX41-217ENST00000515562 DNA2P51530 1060 aa17.81■□□□□ 0.44
DDX41-217ENST00000515562 POLD3Q15054 466 aaPredicted RBP17.81■□□□□ 0.44
DDX41-217ENST00000515562 ZNF284Q2VY69 593 aa17.81■□□□□ 0.44
DDX41-217ENST00000515562 FAM72AQ5TYM5 149 aa17.81■□□□□ 0.44
DDX41-217ENST00000515562 SFMBT2Q5VUG0 894 aa17.81■□□□□ 0.44
DDX41-217ENST00000515562 FAM72DQ6L9T8 149 aa17.81■□□□□ 0.44
DDX41-217ENST00000515562 KIAA1161Q6NSJ0 714 aa17.81■□□□□ 0.44
DDX41-217ENST00000515562 FBXL19Q6PCT2 694 aa17.81■□□□□ 0.44
DDX41-217ENST00000515562 ZSCAN30Q86W11 494 aa17.81■□□□□ 0.44
DDX41-217ENST00000515562 FAM72BQ86X60 149 aa17.81■□□□□ 0.44
DDX41-217ENST00000515562 PROSER1Q86XN7 944 aa17.81■□□□□ 0.44
DDX41-217ENST00000515562 KLHDC7BQ96G42 594 aa17.81■□□□□ 0.44
DDX41-217ENST00000515562 LRIG1Q96JA1 1093 aa17.81■□□□□ 0.44
DDX41-217ENST00000515562 MCEEQ96PE7 176 aa17.81■□□□□ 0.44
DDX41-217ENST00000515562 TM6SF2Q9BZW4 377 aa17.81■□□□□ 0.44
DDX41-217ENST00000515562 CFAP47Q6ZTR5 3102 aa17.81■□□□□ 0.44
DDX41-217ENST00000515562 PLXNB3Q9ULL4 1909 aa17.8■□□□□ 0.44
DDX41-217ENST00000515562 LDOC1O95751 146 aaPredicted RBP17.8■□□□□ 0.44
DDX41-217ENST00000515562 CD160O95971 181 aa17.8■□□□□ 0.44
DDX41-217ENST00000515562 RPS21P63220 83 aaKnown RBP17.8■□□□□ 0.44
DDX41-217ENST00000515562 SMAD1Q15797 465 aaKnown RBP17.8■□□□□ 0.44
DDX41-217ENST00000515562 ANO6Q4KMQ2 910 aa17.8■□□□□ 0.44
DDX41-217ENST00000515562 TMEM259Q4ZIN3 620 aa17.8■□□□□ 0.44
DDX41-217ENST00000515562 CCDC157Q569K6 752 aa17.8■□□□□ 0.44
DDX41-217ENST00000515562 EID2Q8N6I1 236 aa17.8■□□□□ 0.44
DDX41-217ENST00000515562 FAM174AQ8TBP5 190 aa17.8■□□□□ 0.44
DDX41-217ENST00000515562 EPAS1Q99814 870 aa17.8■□□□□ 0.44
DDX41-217ENST00000515562 MYOCQ99972 504 aa17.8■□□□□ 0.44
DDX41-217ENST00000515562 CNPY3Q9BT09 278 aa17.8■□□□□ 0.44
DDX41-217ENST00000515562 CCDC86Q9H6F5 360 aaKnown RBP17.8■□□□□ 0.44
DDX41-217ENST00000515562 ZDHHC6Q9H6R6 413 aa17.8■□□□□ 0.44
DDX41-217ENST00000515562 TMEM63CQ9P1W3 806 aa17.8■□□□□ 0.44
DDX41-217ENST00000515562 HECAQ9UBI9 543 aaPredicted RBP17.8■□□□□ 0.44
DDX41-217ENST00000515562 SMTNL1A8MU46 457 aa17.79■□□□□ 0.44
DDX41-217ENST00000515562 RNF103O00237 685 aa17.79■□□□□ 0.44
DDX41-217ENST00000515562 AP1G1O43747 822 aa17.79■□□□□ 0.44
DDX41-217ENST00000515562 RFPL3O75679 317 aa17.79■□□□□ 0.44
DDX41-217ENST00000515562 GSRP00390 522 aa17.79■□□□□ 0.44
DDX41-217ENST00000515562 CAPNS1P04632 268 aa17.79■□□□□ 0.44
DDX41-217ENST00000515562 C1SP09871 688 aa17.79■□□□□ 0.44
DDX41-217ENST00000515562 THEGLP0DJG4 465 aa17.79■□□□□ 0.44
DDX41-217ENST00000515562 EPHB2P29323 1055 aa17.79■□□□□ 0.44
DDX41-217ENST00000515562 SNRPD1P62314 119 aaKnown RBP17.79■□□□□ 0.44
DDX41-217ENST00000515562 PPP1R15BQ5SWA1 713 aa17.79■□□□□ 0.44
DDX41-217ENST00000515562 ACAD10Q6JQN1 1059 aa17.79■□□□□ 0.44
DDX41-217ENST00000515562 SCYL2Q6P3W7 929 aa17.79■□□□□ 0.44
DDX41-217ENST00000515562 DCUN1D2Q6PH85 259 aa17.79■□□□□ 0.44
DDX41-217ENST00000515562 DHRS13Q6UX07 377 aa17.79■□□□□ 0.44
DDX41-217ENST00000515562 PARS2Q7L3T8 475 aaKnown RBP17.79■□□□□ 0.44
DDX41-217ENST00000515562 KANSL1Q7Z3B3 1105 aa17.79■□□□□ 0.44
DDX41-217ENST00000515562 MCOLN2Q8IZK6 566 aa17.79■□□□□ 0.44
DDX41-217ENST00000515562 RYBPQ8N488 228 aaPredicted RBP17.79■□□□□ 0.44
DDX41-217ENST00000515562 RTL3Q8N8U3 475 aaKnown RBP17.79■□□□□ 0.44
DDX41-217ENST00000515562 OR2AP1Q8NGE2 309 aa17.79■□□□□ 0.44
DDX41-217ENST00000515562 KLK6Q92876 244 aa17.79■□□□□ 0.44
DDX41-217ENST00000515562 RAB7BQ96AH8 199 aa17.79■□□□□ 0.44
DDX41-217ENST00000515562 OSBPL1AQ9BXW6 950 aa17.79■□□□□ 0.44
DDX41-217ENST00000515562 ZFR2Q9UPR6 939 aaKnown RBP17.79■□□□□ 0.44
DDX41-217ENST00000515562 CA5BQ9Y2D0 317 aa17.79■□□□□ 0.44
DDX41-217ENST00000515562 ACTL7AQ9Y615 435 aa17.79■□□□□ 0.44
DDX41-217ENST00000515562 DOCK9Q9BZ29 2069 aa17.78■□□□□ 0.44
DDX41-217ENST00000515562 FREM2Q5SZK8 3169 aa17.78■□□□□ 0.44
DDX41-217ENST00000515562 FGF10O15520 208 aaPredicted RBP17.78■□□□□ 0.44
DDX41-217ENST00000515562 KDELR3O43731 214 aa17.78■□□□□ 0.44
DDX41-217ENST00000515562 RPL7AP62424 266 aaKnown RBP17.78■□□□□ 0.44
DDX41-217ENST00000515562 BNIP3Q12983 259 aa17.78■□□□□ 0.44
DDX41-217ENST00000515562 FILIP1LQ4L180 1135 aa17.78■□□□□ 0.44
DDX41-217ENST00000515562 SEL1L3Q68CR1 1132 aa17.78■□□□□ 0.44
DDX41-217ENST00000515562 TMPRSS12Q86WS5 348 aa17.78■□□□□ 0.44
DDX41-217ENST00000515562 ZNF354CQ86Y25 554 aa17.78■□□□□ 0.44
DDX41-217ENST00000515562 OR6K2Q8NGY2 324 aa17.78■□□□□ 0.44
DDX41-217ENST00000515562 CASKIN2Q8WXE0 1202 aa17.78■□□□□ 0.44
DDX41-217ENST00000515562 BAP1Q92560 729 aa17.78■□□□□ 0.44
DDX41-217ENST00000515562 ARHGEF26Q96DR7 871 aa17.78■□□□□ 0.44
DDX41-217ENST00000515562 VCPIP1Q96JH7 1222 aa17.78■□□□□ 0.44
DDX41-217ENST00000515562 FEM1CQ96JP0 617 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms