RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 ITGB7P26010 798 aa13.92□□□□□ -0.18
TCOF1-215ENST00000515516 RXRGP48443 463 aa13.92□□□□□ -0.18
TCOF1-215ENST00000515516 ZNF165P49910 485 aa13.92□□□□□ -0.18
TCOF1-215ENST00000515516 CCNHP51946 323 aaPredicted RBP13.92□□□□□ -0.18
TCOF1-215ENST00000515516 TAS2R38P59533 333 aa13.92□□□□□ -0.18
TCOF1-215ENST00000515516 SNRPD1P62314 119 aaKnown RBP13.92□□□□□ -0.18
TCOF1-215ENST00000515516 TPM4P67936 248 aa13.92□□□□□ -0.18
TCOF1-215ENST00000515516 SCAPQ12770 1279 aa13.92□□□□□ -0.18
TCOF1-215ENST00000515516 HS1BP3Q53T59 392 aa13.92□□□□□ -0.18
TCOF1-215ENST00000515516 ARTNQ5T4W7 220 aa13.92□□□□□ -0.18
TCOF1-215ENST00000515516 CCNI2Q6ZMN8 369 aaPredicted RBP13.92□□□□□ -0.18
TCOF1-215ENST00000515516 PLPP6Q8IY26 295 aa13.92□□□□□ -0.18
TCOF1-215ENST00000515516 MCOLN2Q8IZK6 566 aa13.92□□□□□ -0.18
TCOF1-215ENST00000515516 EID2Q8N6I1 236 aa13.92□□□□□ -0.18
TCOF1-215ENST00000515516 SAP25Q8TEE9 199 aa13.92□□□□□ -0.18
TCOF1-215ENST00000515516 KLK6Q92876 244 aa13.92□□□□□ -0.18
TCOF1-215ENST00000515516 LRIG1Q96JA1 1093 aa13.92□□□□□ -0.18
TCOF1-215ENST00000515516 VCPIP1Q96JH7 1222 aa13.92□□□□□ -0.18
TCOF1-215ENST00000515516 CNDP2Q96KP4 475 aaKnown RBP13.92□□□□□ -0.18
TCOF1-215ENST00000515516 TM6SF2Q9BZW4 377 aa13.92□□□□□ -0.18
TCOF1-215ENST00000515516 CATSPERBQ9H7T0 1116 aa13.92□□□□□ -0.18
TCOF1-215ENST00000515516 NDFIP2Q9NV92 336 aa13.92□□□□□ -0.18
TCOF1-215ENST00000515516 PARVAQ9NVD7 372 aa13.92□□□□□ -0.18
TCOF1-215ENST00000515516 DONSONQ9NYP3 566 aa13.92□□□□□ -0.18
TCOF1-215ENST00000515516 WASF2Q9Y6W5 498 aa13.92□□□□□ -0.18
TCOF1-215ENST00000515516 TMCO5BA8MYB1 307 aa13.91□□□□□ -0.18
TCOF1-215ENST00000515516 NEMP1O14524 444 aa13.91□□□□□ -0.18
TCOF1-215ENST00000515516 ENC1O14682 589 aa13.91□□□□□ -0.18
TCOF1-215ENST00000515516 KDELR3O43731 214 aa13.91□□□□□ -0.18
TCOF1-215ENST00000515516 ZNF821O75541 412 aaPredicted RBP13.91□□□□□ -0.18
TCOF1-215ENST00000515516 POP4O95707 220 aaKnown RBP13.91□□□□□ -0.18
TCOF1-215ENST00000515516 SERPINC1P01008 464 aa13.91□□□□□ -0.18
TCOF1-215ENST00000515516 THEGLP0DJG4 465 aa13.91□□□□□ -0.18
TCOF1-215ENST00000515516 CDK4P11802 303 aa13.91□□□□□ -0.18
TCOF1-215ENST00000515516 ADRB3P13945 408 aa13.91□□□□□ -0.18
TCOF1-215ENST00000515516 PRLRP16471 622 aa13.91□□□□□ -0.18
TCOF1-215ENST00000515516 HNRNPA2B1P22626 353 aaKnown RBP13.91□□□□□ -0.18
TCOF1-215ENST00000515516 EPHA8P29322 1005 aaPredicted RBP13.91□□□□□ -0.18
TCOF1-215ENST00000515516 RPS21P63220 83 aaKnown RBP13.91□□□□□ -0.18
TCOF1-215ENST00000515516 RAD51Q06609 339 aa13.91□□□□□ -0.18
TCOF1-215ENST00000515516 MAPK8IP2Q13387 824 aaPredicted RBP13.91□□□□□ -0.18
TCOF1-215ENST00000515516 SHBQ15464 509 aa13.91□□□□□ -0.18
TCOF1-215ENST00000515516 ZNF284Q2VY69 593 aa13.91□□□□□ -0.18
TCOF1-215ENST00000515516 SFMBT2Q5VUG0 894 aa13.91□□□□□ -0.18
TCOF1-215ENST00000515516 KIAA1161Q6NSJ0 714 aa13.91□□□□□ -0.18
TCOF1-215ENST00000515516 TMPRSS7Q7RTY8 843 aa13.91□□□□□ -0.18
TCOF1-215ENST00000515516 IRF2BP2Q7Z5L9 587 aa13.91□□□□□ -0.18
TCOF1-215ENST00000515516 ZSCAN30Q86W11 494 aa13.91□□□□□ -0.18
TCOF1-215ENST00000515516 SPATS2Q86XZ4 545 aaKnown RBP13.91□□□□□ -0.18
TCOF1-215ENST00000515516 RTL3Q8N8U3 475 aaKnown RBP13.91□□□□□ -0.18
TCOF1-215ENST00000515516 FAM174AQ8TBP5 190 aa13.91□□□□□ -0.18
TCOF1-215ENST00000515516 MYOCQ99972 504 aa13.91□□□□□ -0.18
TCOF1-215ENST00000515516 MAGEB5Q9BZ81 275 aa13.91□□□□□ -0.18
TCOF1-215ENST00000515516 TOR4AQ9NXH8 423 aa13.91□□□□□ -0.18
TCOF1-215ENST00000515516 FZD10Q9ULW2 581 aa13.91□□□□□ -0.18
TCOF1-215ENST00000515516 EPG5Q9HCE0 2579 aa13.91□□□□□ -0.18
TCOF1-215ENST00000515516 CHD8Q9HCK8 2581 aa13.91□□□□□ -0.18
TCOF1-215ENST00000515516 NUMA1Q14980 2115 aa13.9□□□□□ -0.18
TCOF1-215ENST00000515516 CACNA1EQ15878 2313 aa13.9□□□□□ -0.18
TCOF1-215ENST00000515516 LRRC53A6NM62 1247 aa13.9□□□□□ -0.18
TCOF1-215ENST00000515516 KRIT1O00522 736 aa13.9□□□□□ -0.18
TCOF1-215ENST00000515516 GSRP00390 522 aa13.9□□□□□ -0.18
TCOF1-215ENST00000515516 PSMA2P25787 234 aa13.9□□□□□ -0.18
TCOF1-215ENST00000515516 YBEYP58557 167 aaPredicted RBP13.9□□□□□ -0.18
TCOF1-215ENST00000515516 RPL7AP62424 266 aaKnown RBP13.9□□□□□ -0.18
TCOF1-215ENST00000515516 BNIP3Q12983 259 aa13.9□□□□□ -0.18
TCOF1-215ENST00000515516 SGCGQ13326 291 aa13.9□□□□□ -0.18
TCOF1-215ENST00000515516 MYLK3Q32MK0 819 aa13.9□□□□□ -0.18
TCOF1-215ENST00000515516 LEKR1Q6ZMV7 388 aa13.9□□□□□ -0.18
TCOF1-215ENST00000515516 TMC6Q7Z403 805 aa13.9□□□□□ -0.18
TCOF1-215ENST00000515516 PYROXD2Q8N2H3 581 aa13.9□□□□□ -0.18
TCOF1-215ENST00000515516 OR2AP1Q8NGE2 309 aa13.9□□□□□ -0.18
TCOF1-215ENST00000515516 OR6K2Q8NGY2 324 aa13.9□□□□□ -0.18
TCOF1-215ENST00000515516 CASKIN2Q8WXE0 1202 aa13.9□□□□□ -0.18
TCOF1-215ENST00000515516 BAP1Q92560 729 aa13.9□□□□□ -0.18
TCOF1-215ENST00000515516 RAB7BQ96AH8 199 aa13.9□□□□□ -0.18
TCOF1-215ENST00000515516 CALN1Q9BXU9 219 aa13.9□□□□□ -0.18
TCOF1-215ENST00000515516 OSBPL1AQ9BXW6 950 aa13.9□□□□□ -0.18
TCOF1-215ENST00000515516 SLC17A9Q9BYT1 436 aa13.9□□□□□ -0.18
TCOF1-215ENST00000515516 CA5BQ9Y2D0 317 aa13.9□□□□□ -0.18
TCOF1-215ENST00000515516 ACTL7AQ9Y615 435 aa13.9□□□□□ -0.18
TCOF1-215ENST00000515516 A0A1W2PQC6 194 aa13.89□□□□□ -0.19
TCOF1-215ENST00000515516 TCRBV5S1A1TA0A578 114 aa13.89□□□□□ -0.19
TCOF1-215ENST00000515516 FGF10O15520 208 aaPredicted RBP13.89□□□□□ -0.19
TCOF1-215ENST00000515516 TSPAN6O43657 245 aa13.89□□□□□ -0.19
TCOF1-215ENST00000515516 AP1G1O43747 822 aa13.89□□□□□ -0.19
TCOF1-215ENST00000515516 RNF8O76064 485 aa13.89□□□□□ -0.19
TCOF1-215ENST00000515516 DKK1O94907 266 aa13.89□□□□□ -0.19
TCOF1-215ENST00000515516 CD160O95971 181 aa13.89□□□□□ -0.19
TCOF1-215ENST00000515516 C1SP09871 688 aa13.89□□□□□ -0.19
TCOF1-215ENST00000515516 HTR7P34969 479 aa13.89□□□□□ -0.19
TCOF1-215ENST00000515516 TPI1P60174 286 aa13.89□□□□□ -0.19
TCOF1-215ENST00000515516 KLHL30Q0D2K2 578 aa13.89□□□□□ -0.19
TCOF1-215ENST00000515516 MAMLD1Q13495 774 aa13.89□□□□□ -0.19
TCOF1-215ENST00000515516 PARP15Q460N3 678 aa13.89□□□□□ -0.19
TCOF1-215ENST00000515516 ZNF805Q5CZA5 627 aa13.89□□□□□ -0.19
TCOF1-215ENST00000515516 PPP1R15BQ5SWA1 713 aa13.89□□□□□ -0.19
TCOF1-215ENST00000515516 SEL1L3Q68CR1 1132 aa13.89□□□□□ -0.19
TCOF1-215ENST00000515516 DCP2Q8IU60 420 aaKnown RBP13.89□□□□□ -0.19
TCOF1-215ENST00000515516 TMEM145Q8NBT3 493 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms