RNA–Protein interactions for RNA: ENST00000515508.6

SPOP-220, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-220ENST00000515508 SPACA3Q8IXA5 215 aa18.77■□□□□ 0.6
SPOP-220ENST00000515508 PCDH20Q8N6Y1 951 aaKnown RBP18.77■□□□□ 0.6
SPOP-220ENST00000515508 C18orf8Q96DM3 657 aa18.77■□□□□ 0.6
SPOP-220ENST00000515508 BMFQ96LC9 184 aa18.77■□□□□ 0.6
SPOP-220ENST00000515508 HAPLN3Q96S86 360 aa18.77■□□□□ 0.6
SPOP-220ENST00000515508 DUSP23Q9BVJ7 150 aa18.77■□□□□ 0.6
SPOP-220ENST00000515508 ASH1LQ9NR48 2969 aaKnown RBP18.76■□□□□ 0.59
SPOP-220ENST00000515508 CXorf51AA0A1B0GTR3 108 aa18.76■□□□□ 0.59
SPOP-220ENST00000515508 NEMP2A6NFY4 417 aa18.76■□□□□ 0.59
SPOP-220ENST00000515508 SCAMP1O15126 338 aa18.76■□□□□ 0.59
SPOP-220ENST00000515508 AP1G1O43747 822 aa18.76■□□□□ 0.59
SPOP-220ENST00000515508 LZTS3O60299 673 aaPredicted RBP18.76■□□□□ 0.59
SPOP-220ENST00000515508 DXOO77932 396 aaKnown RBP18.76■□□□□ 0.59
SPOP-220ENST00000515508 CYP11B1P15538 503 aa18.76■□□□□ 0.59
SPOP-220ENST00000515508 MTIF2P46199 727 aaKnown RBP18.76■□□□□ 0.59
SPOP-220ENST00000515508 RPS21P63220 83 aaKnown RBP18.76■□□□□ 0.59
SPOP-220ENST00000515508 ARF5P84085 180 aa18.76■□□□□ 0.59
SPOP-220ENST00000515508 SLC20A2Q08357 652 aa18.76■□□□□ 0.59
SPOP-220ENST00000515508 FGL2Q14314 439 aa18.76■□□□□ 0.59
SPOP-220ENST00000515508 TRNP1Q6NT89 227 aa18.76■□□□□ 0.59
SPOP-220ENST00000515508 Q6ZSR6 202 aa18.76■□□□□ 0.59
SPOP-220ENST00000515508 GPR155Q7Z3F1 870 aa18.76■□□□□ 0.59
SPOP-220ENST00000515508 PTAR1Q7Z6K3 402 aaPredicted RBP18.76■□□□□ 0.59
SPOP-220ENST00000515508 ZSCAN30Q86W11 494 aa18.76■□□□□ 0.59
SPOP-220ENST00000515508 HIC2Q96JB3 615 aa18.76■□□□□ 0.59
SPOP-220ENST00000515508 ZNF578Q96N58 590 aaPredicted RBP18.76■□□□□ 0.59
SPOP-220ENST00000515508 DEPDC7Q96QD5 511 aa18.76■□□□□ 0.59
SPOP-220ENST00000515508 HEPHQ9BQS7 1158 aa18.76■□□□□ 0.59
SPOP-220ENST00000515508 SLC17A9Q9BYT1 436 aa18.76■□□□□ 0.59
SPOP-220ENST00000515508 ZYG11BQ9C0D3 744 aa18.76■□□□□ 0.59
SPOP-220ENST00000515508 DNAJC28Q9NX36 388 aa18.76■□□□□ 0.59
SPOP-220ENST00000515508 FADS3Q9Y5Q0 445 aa18.76■□□□□ 0.59
SPOP-220ENST00000515508 SPTY2D1-AS1A0A0U1RR47 76 aa18.75■□□□□ 0.59
SPOP-220ENST00000515508 POM121BA6NF01 834 aa18.75■□□□□ 0.59
SPOP-220ENST00000515508 K7ESM1 405 aa18.75■□□□□ 0.59
SPOP-220ENST00000515508 NME1P15531 152 aaKnown RBP18.75■□□□□ 0.59
SPOP-220ENST00000515508 L1CAMP32004 1257 aa18.75■□□□□ 0.59
SPOP-220ENST00000515508 CCNHP51946 323 aaPredicted RBP18.75■□□□□ 0.59
SPOP-220ENST00000515508 PCBP4P57723 403 aaKnown RBP18.75■□□□□ 0.59
SPOP-220ENST00000515508 CCDC173Q0VFZ6 552 aa18.75■□□□□ 0.59
SPOP-220ENST00000515508 FZD2Q14332 565 aa18.75■□□□□ 0.59
SPOP-220ENST00000515508 ARCQ7LC44 396 aa18.75■□□□□ 0.59
SPOP-220ENST00000515508 PARGQ86W56 976 aa18.75■□□□□ 0.59
SPOP-220ENST00000515508 ZNF248Q8NDW4 579 aa18.75■□□□□ 0.59
SPOP-220ENST00000515508 ZNF548Q8NEK5 533 aaPredicted RBP18.75■□□□□ 0.59
SPOP-220ENST00000515508 NDST4Q9H3R1 872 aa18.75■□□□□ 0.59
SPOP-220ENST00000515508 ATP13A1Q9HD20 1204 aa18.75■□□□□ 0.59
SPOP-220ENST00000515508 EVA1BQ9NVM1 165 aa18.75■□□□□ 0.59
SPOP-220ENST00000515508 PPARGC1AQ9UBK2 798 aaKnown RBP18.75■□□□□ 0.59
SPOP-220ENST00000515508 TMEM59LQ9UK28 342 aa18.75■□□□□ 0.59
SPOP-220ENST00000515508 ZNF462Q96JM2 2506 aa18.74■□□□□ 0.59
SPOP-220ENST00000515508 RAD51BO15315 384 aa18.74■□□□□ 0.59
SPOP-220ENST00000515508 SRGAP2O75044 1071 aa18.74■□□□□ 0.59
SPOP-220ENST00000515508 ENDOD1O94919 500 aa18.74■□□□□ 0.59
SPOP-220ENST00000515508 LSM8O95777 96 aaKnown RBP18.74■□□□□ 0.59
SPOP-220ENST00000515508 CD160O95971 181 aa18.74■□□□□ 0.59
SPOP-220ENST00000515508 CSF2P04141 144 aa18.74■□□□□ 0.59
SPOP-220ENST00000515508 DUSP3P51452 185 aaPredicted RBP18.74■□□□□ 0.59
SPOP-220ENST00000515508 GNA12Q03113 381 aa18.74■□□□□ 0.59
SPOP-220ENST00000515508 MAPK8IP2Q13387 824 aaPredicted RBP18.74■□□□□ 0.59
SPOP-220ENST00000515508 DRAP1Q14919 205 aaPredicted RBP18.74■□□□□ 0.59
SPOP-220ENST00000515508 CAMK4Q16566 473 aa18.74■□□□□ 0.59
SPOP-220ENST00000515508 ZNF542PQ5EBM4 170 aa18.74■□□□□ 0.59
SPOP-220ENST00000515508 CARD16Q5EG05 197 aa18.74■□□□□ 0.59
SPOP-220ENST00000515508 MIIPQ5JXC2 388 aa18.74■□□□□ 0.59
SPOP-220ENST00000515508 ZCCHC8Q6NZY4 707 aaKnown RBP18.74■□□□□ 0.59
SPOP-220ENST00000515508 PARS2Q7L3T8 475 aaKnown RBP18.74■□□□□ 0.59
SPOP-220ENST00000515508 LSMEM2Q8N112 164 aa18.74■□□□□ 0.59
SPOP-220ENST00000515508 MLKLQ8NB16 471 aa18.74■□□□□ 0.59
SPOP-220ENST00000515508 FEM1CQ96JP0 617 aa18.74■□□□□ 0.59
SPOP-220ENST00000515508 CFAP57Q96MR6 1250 aa18.74■□□□□ 0.59
SPOP-220ENST00000515508 LENG8Q96PV6 779 aaPredicted RBP18.74■□□□□ 0.59
SPOP-220ENST00000515508 LGMNQ99538 433 aa18.74■□□□□ 0.59
SPOP-220ENST00000515508 KLF6Q99612 283 aaPredicted RBP18.74■□□□□ 0.59
SPOP-220ENST00000515508 SPON2Q9BUD6 331 aa18.74■□□□□ 0.59
SPOP-220ENST00000515508 PDCL3Q9H2J4 239 aa18.74■□□□□ 0.59
SPOP-220ENST00000515508 CSNK1G3Q9Y6M4 447 aa18.74■□□□□ 0.59
SPOP-220ENST00000515508 H3BM21 787 aa18.73■□□□□ 0.59
SPOP-220ENST00000515508 RIOK3O14730 519 aaKnown RBP18.73■□□□□ 0.59
SPOP-220ENST00000515508 CSO75390 466 aaKnown RBP18.73■□□□□ 0.59
SPOP-220ENST00000515508 NEBLO76041 1014 aa18.73■□□□□ 0.59
SPOP-220ENST00000515508 PAK4O96013 591 aaPredicted RBP18.73■□□□□ 0.59
SPOP-220ENST00000515508 MPOP05164 745 aa18.73■□□□□ 0.59
SPOP-220ENST00000515508 MYF5P13349 255 aa18.73■□□□□ 0.59
SPOP-220ENST00000515508 RABIFP47224 123 aa18.73■□□□□ 0.59
SPOP-220ENST00000515508 LSSP48449 732 aa18.73■□□□□ 0.59
SPOP-220ENST00000515508 ERVPABLB-1P60509 514 aa18.73■□□□□ 0.59
SPOP-220ENST00000515508 GABREP78334 506 aa18.73■□□□□ 0.59
SPOP-220ENST00000515508 RAPGEF1Q13905 1077 aa18.73■□□□□ 0.59
SPOP-220ENST00000515508 C2CD6Q53TS8 623 aa18.73■□□□□ 0.59
SPOP-220ENST00000515508 PCSK4Q6UW60 755 aa18.73■□□□□ 0.59
SPOP-220ENST00000515508 FAM131BQ86XD5 332 aa18.73■□□□□ 0.59
SPOP-220ENST00000515508 FAM114A1Q8IWE2 563 aa18.73■□□□□ 0.59
SPOP-220ENST00000515508 PLPP6Q8IY26 295 aa18.73■□□□□ 0.59
SPOP-220ENST00000515508 ISG20Q96AZ6 181 aaKnown RBP18.73■□□□□ 0.59
SPOP-220ENST00000515508 C1QTNF2Q9BXJ5 285 aa18.73■□□□□ 0.59
SPOP-220ENST00000515508 FCF1Q9Y324 198 aaKnown RBP18.73■□□□□ 0.59
SPOP-220ENST00000515508 FHOD1Q9Y613 1164 aa18.73■□□□□ 0.59
SPOP-220ENST00000515508 FLNBO75369 2602 aaKnown RBP18.73■□□□□ 0.59
SPOP-220ENST00000515508 USP12O75317 370 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms