RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 IL1AP01583 271 aa5.48□□□□□ -1.53
HMGCS1-207ENST00000514610 FGF2P09038 288 aa5.48□□□□□ -1.53
HMGCS1-207ENST00000514610 PRF1P14222 555 aa5.48□□□□□ -1.53
HMGCS1-207ENST00000514610 EDN2P20800 178 aa5.48□□□□□ -1.53
HMGCS1-207ENST00000514610 EPHA8P29322 1005 aaPredicted RBP5.48□□□□□ -1.53
HMGCS1-207ENST00000514610 SLC18A2Q05940 514 aa5.48□□□□□ -1.53
HMGCS1-207ENST00000514610 RBMS2Q15434 407 aaKnown RBP5.48□□□□□ -1.53
HMGCS1-207ENST00000514610 INPP5JQ15735 1006 aaPredicted RBP5.48□□□□□ -1.53
HMGCS1-207ENST00000514610 TSTQ16762 297 aaKnown RBP5.48□□□□□ -1.53
HMGCS1-207ENST00000514610 CCDC142Q17RM4 750 aa5.48□□□□□ -1.53
HMGCS1-207ENST00000514610 SLC9B1Q4ZJI4 515 aa5.48□□□□□ -1.53
HMGCS1-207ENST00000514610 NUGGCQ68CJ6 796 aa5.48□□□□□ -1.53
HMGCS1-207ENST00000514610 TMEM81Q6P7N7 255 aa5.48□□□□□ -1.53
HMGCS1-207ENST00000514610 IL20RBQ6UXL0 311 aa5.48□□□□□ -1.53
HMGCS1-207ENST00000514610 PRSS45Q7RTY3 260 aa5.48□□□□□ -1.53
HMGCS1-207ENST00000514610 CHD1LQ86WJ1 897 aa5.48□□□□□ -1.53
HMGCS1-207ENST00000514610 ARMC8Q8IUR7 673 aa5.48□□□□□ -1.53
HMGCS1-207ENST00000514610 NFKBIDQ8NI38 313 aa5.48□□□□□ -1.53
HMGCS1-207ENST00000514610 PIGOQ8TEQ8 1089 aa5.48□□□□□ -1.53
HMGCS1-207ENST00000514610 GDPD5Q8WTR4 605 aa5.48□□□□□ -1.53
HMGCS1-207ENST00000514610 ATOH1Q92858 354 aaPredicted RBP5.48□□□□□ -1.53
HMGCS1-207ENST00000514610 SKA1Q96BD8 255 aa5.48□□□□□ -1.53
HMGCS1-207ENST00000514610 WDR6Q9NNW5 1121 aaKnown RBP5.48□□□□□ -1.53
HMGCS1-207ENST00000514610 ENTPD7Q9NQZ7 604 aa5.48□□□□□ -1.53
HMGCS1-207ENST00000514610 RNF146Q9NTX7 359 aa5.48□□□□□ -1.53
HMGCS1-207ENST00000514610 PPP1R14DQ9NXH3 145 aa5.48□□□□□ -1.53
HMGCS1-207ENST00000514610 IL1RAPL1Q9NZN1 696 aa5.48□□□□□ -1.53
HMGCS1-207ENST00000514610 SARDHQ9UL12 918 aa5.48□□□□□ -1.53
HMGCS1-207ENST00000514610 DNAJC9-AS1A6NH13 148 aa5.47□□□□□ -1.53
HMGCS1-207ENST00000514610 CBY3A6NI87 242 aa5.47□□□□□ -1.53
HMGCS1-207ENST00000514610 MMP13P45452 471 aa5.47□□□□□ -1.53
HMGCS1-207ENST00000514610 GEMIN4P57678 1058 aaKnown RBP5.47□□□□□ -1.53
HMGCS1-207ENST00000514610 TMPRSS3P57727 454 aa5.47□□□□□ -1.53
HMGCS1-207ENST00000514610 MRPS21P82921 87 aaKnown RBP5.47□□□□□ -1.53
HMGCS1-207ENST00000514610 ETFDHQ16134 617 aa5.47□□□□□ -1.53
HMGCS1-207ENST00000514610 TMEM71Q6P5X7 295 aa5.47□□□□□ -1.53
HMGCS1-207ENST00000514610 C1orf122Q6ZSJ8 110 aa5.47□□□□□ -1.53
HMGCS1-207ENST00000514610 RSRC2Q7L4I2 434 aaKnown RBP5.47□□□□□ -1.53
HMGCS1-207ENST00000514610 R3HCC1LQ7Z5L2 792 aaKnown RBP5.47□□□□□ -1.53
HMGCS1-207ENST00000514610 TBC1D1Q86TI0 1168 aaPredicted RBP5.47□□□□□ -1.53
HMGCS1-207ENST00000514610 DPP10Q8N608 796 aa5.47□□□□□ -1.53
HMGCS1-207ENST00000514610 NANOGP1Q8N7R0 232 aa5.47□□□□□ -1.53
HMGCS1-207ENST00000514610 ZNF548Q8NEK5 533 aaPredicted RBP5.47□□□□□ -1.53
HMGCS1-207ENST00000514610 KIF1BPQ96EK5 621 aa5.47□□□□□ -1.53
HMGCS1-207ENST00000514610 TUBA8Q9NY65 449 aaPredicted RBP5.47□□□□□ -1.53
HMGCS1-207ENST00000514610 RAP2CQ9Y3L5 183 aa5.47□□□□□ -1.53
HMGCS1-207ENST00000514610 KDM3AQ9Y4C1 1321 aa5.47□□□□□ -1.53
HMGCS1-207ENST00000514610 A0A1W2PQM1 296 aa5.46□□□□□ -1.54
HMGCS1-207ENST00000514610 RNMTO43148 476 aaKnown RBP5.46□□□□□ -1.54
HMGCS1-207ENST00000514610 SLC25A17O43808 307 aa5.46□□□□□ -1.54
HMGCS1-207ENST00000514610 TACC1O75410 805 aa5.46□□□□□ -1.54
HMGCS1-207ENST00000514610 RTN3O95197 1032 aaPredicted RBP5.46□□□□□ -1.54
HMGCS1-207ENST00000514610 EPN2O95208 641 aa5.46□□□□□ -1.54
HMGCS1-207ENST00000514610 FGBP02675 491 aa5.46□□□□□ -1.54
HMGCS1-207ENST00000514610 COX7A2P14406 83 aa5.46□□□□□ -1.54
HMGCS1-207ENST00000514610 TNFRSF1BP20333 461 aa5.46□□□□□ -1.54
HMGCS1-207ENST00000514610 YWHAQP27348 245 aa5.46□□□□□ -1.54
HMGCS1-207ENST00000514610 RGS2P41220 211 aa5.46□□□□□ -1.54
HMGCS1-207ENST00000514610 HARS2P49590 506 aaKnown RBP5.46□□□□□ -1.54
HMGCS1-207ENST00000514610 BLKP51451 505 aa5.46□□□□□ -1.54
HMGCS1-207ENST00000514610 CCR9P51686 369 aa5.46□□□□□ -1.54
HMGCS1-207ENST00000514610 CYP4A11Q02928 519 aa5.46□□□□□ -1.54
HMGCS1-207ENST00000514610 RABEP1Q15276 862 aa5.46□□□□□ -1.54
HMGCS1-207ENST00000514610 ODF3L2Q3SX64 289 aa5.46□□□□□ -1.54
HMGCS1-207ENST00000514610 INO80CQ6PI98 192 aaPredicted RBP5.46□□□□□ -1.54
HMGCS1-207ENST00000514610 SERPINA11Q86U17 422 aa5.46□□□□□ -1.54
HMGCS1-207ENST00000514610 FAM160B2Q86V87 743 aa5.46□□□□□ -1.54
HMGCS1-207ENST00000514610 ZNF575Q86XF7 245 aa5.46□□□□□ -1.54
HMGCS1-207ENST00000514610 FAM217AQ8IXS0 508 aa5.46□□□□□ -1.54
HMGCS1-207ENST00000514610 FAM185AQ8N0U4 392 aa5.46□□□□□ -1.54
HMGCS1-207ENST00000514610 KCNG4Q8TDN1 519 aa5.46□□□□□ -1.54
HMGCS1-207ENST00000514610 TMEM174Q8WUU8 243 aa5.46□□□□□ -1.54
HMGCS1-207ENST00000514610 TMEM170AQ8WVE7 144 aa5.46□□□□□ -1.54
HMGCS1-207ENST00000514610 NR1H4Q96RI1 486 aaPredicted RBP5.46□□□□□ -1.54
HMGCS1-207ENST00000514610 TRMOQ9BU70 441 aa5.46□□□□□ -1.54
HMGCS1-207ENST00000514610 B3GNT4Q9C0J1 378 aa5.46□□□□□ -1.54
HMGCS1-207ENST00000514610 VEZTQ9HBM0 779 aa5.46□□□□□ -1.54
HMGCS1-207ENST00000514610 SNTG1Q9NSN8 517 aa5.46□□□□□ -1.54
HMGCS1-207ENST00000514610 IRAK4Q9NWZ3 460 aa5.46□□□□□ -1.54
HMGCS1-207ENST00000514610 KCND2Q9NZV8 630 aa5.46□□□□□ -1.54
HMGCS1-207ENST00000514610 TEX13CA0A0J9YWL9 993 aa5.45□□□□□ -1.54
HMGCS1-207ENST00000514610 TMEM272A0A1B0GTI8 110 aa5.45□□□□□ -1.54
HMGCS1-207ENST00000514610 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.45□□□□□ -1.54
HMGCS1-207ENST00000514610 A0A1W2PPH5 198 aa5.45□□□□□ -1.54
HMGCS1-207ENST00000514610 ARHGAP10A1A4S6 786 aa5.45□□□□□ -1.54
HMGCS1-207ENST00000514610 HSPB6O14558 160 aa5.45□□□□□ -1.54
HMGCS1-207ENST00000514610 MDM4O15151 490 aa5.45□□□□□ -1.54
HMGCS1-207ENST00000514610 NDUFB8O95169 186 aa5.45□□□□□ -1.54
HMGCS1-207ENST00000514610 CLDN7O95471 211 aa5.45□□□□□ -1.54
HMGCS1-207ENST00000514610 GALTP07902 379 aa5.45□□□□□ -1.54
HMGCS1-207ENST00000514610 RXRGP48443 463 aa5.45□□□□□ -1.54
HMGCS1-207ENST00000514610 RALBP1Q15311 655 aa5.45□□□□□ -1.54
HMGCS1-207ENST00000514610 EDRF1Q3B7T1 1238 aa5.45□□□□□ -1.54
HMGCS1-207ENST00000514610 FAAH2Q6GMR7 532 aa5.45□□□□□ -1.54
HMGCS1-207ENST00000514610 CADM3Q8N126 398 aa5.45□□□□□ -1.54
HMGCS1-207ENST00000514610 HORMAD2Q8N7B1 307 aa5.45□□□□□ -1.54
HMGCS1-207ENST00000514610 RASSF8Q8NHQ8 419 aa5.45□□□□□ -1.54
HMGCS1-207ENST00000514610 TDRD7Q8NHU6 1098 aaKnown RBP5.45□□□□□ -1.54
HMGCS1-207ENST00000514610 CENPIQ92674 756 aaPredicted RBP5.45□□□□□ -1.54
HMGCS1-207ENST00000514610 RPL36ALQ969Q0 106 aaKnown RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms