RNA–Protein interactions for RNA: ENST00000514537.5

CLDND1-230, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 1,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-230ENST00000514537 DMTF1Q9Y222 760 aa23.48■■□□□ 1.35
CLDND1-230ENST00000514537 EPG5Q9HCE0 2579 aa23.47■■□□□ 1.35
CLDND1-230ENST00000514537 PCDHGA12O60330 932 aa23.47■■□□□ 1.35
CLDND1-230ENST00000514537 TOP3BO95985 862 aaKnown RBP23.47■■□□□ 1.35
CLDND1-230ENST00000514537 MAT2AP31153 395 aaKnown RBP23.47■■□□□ 1.35
CLDND1-230ENST00000514537 CCT8P50990 548 aa23.47■■□□□ 1.35
CLDND1-230ENST00000514537 CCNHP51946 323 aaPredicted RBP23.47■■□□□ 1.35
CLDND1-230ENST00000514537 HGSNATQ68CP4 663 aa23.47■■□□□ 1.35
CLDND1-230ENST00000514537 PPP1R16AQ96I34 528 aa23.47■■□□□ 1.35
CLDND1-230ENST00000514537 ISCUQ9H1K1 167 aa23.47■■□□□ 1.35
CLDND1-230ENST00000514537 CATSPERBQ9H7T0 1116 aa23.47■■□□□ 1.35
CLDND1-230ENST00000514537 HECAQ9UBI9 543 aaPredicted RBP23.47■■□□□ 1.35
CLDND1-230ENST00000514537 BZW2Q9Y6E2 419 aaKnown RBP23.47■■□□□ 1.35
CLDND1-230ENST00000514537 ZSCAN5CA6NGD5 496 aaPredicted RBP23.46■■□□□ 1.35
CLDND1-230ENST00000514537 FLRT2O43155 660 aa23.46■■□□□ 1.35
CLDND1-230ENST00000514537 RNGTTO60942 597 aaKnown RBP23.46■■□□□ 1.35
CLDND1-230ENST00000514537 HTR7P34969 479 aa23.46■■□□□ 1.35
CLDND1-230ENST00000514537 YBEYP58557 167 aaPredicted RBP23.46■■□□□ 1.35
CLDND1-230ENST00000514537 SKOR2Q2VWA4 1001 aaPredicted RBP23.46■■□□□ 1.35
CLDND1-230ENST00000514537 SLC45A4Q5BKX6 768 aa23.46■■□□□ 1.35
CLDND1-230ENST00000514537 GLRX5Q86SX6 157 aa23.46■■□□□ 1.35
CLDND1-230ENST00000514537 UMODL1-AS1Q8N2C9 162 aa23.46■■□□□ 1.35
CLDND1-230ENST00000514537 MFSD2AQ8NA29 543 aa23.46■■□□□ 1.35
CLDND1-230ENST00000514537 BAHD1Q8TBE0 780 aaPredicted RBP23.46■■□□□ 1.35
CLDND1-230ENST00000514537 ZNF653Q96CK0 615 aa23.46■■□□□ 1.35
CLDND1-230ENST00000514537 IQCDQ96DY2 449 aa23.46■■□□□ 1.35
CLDND1-230ENST00000514537 TRIM11Q96F44 468 aa23.46■■□□□ 1.35
CLDND1-230ENST00000514537 TM6SF2Q9BZW4 377 aa23.46■■□□□ 1.35
CLDND1-230ENST00000514537 TRIM7Q9C029 511 aa23.46■■□□□ 1.35
CLDND1-230ENST00000514537 CAPN11Q9UMQ6 739 aa23.46■■□□□ 1.35
CLDND1-230ENST00000514537 A0A1B0GTQ1 180 aa23.45■■□□□ 1.34
CLDND1-230ENST00000514537 TLR4O00206 839 aa23.45■■□□□ 1.34
CLDND1-230ENST00000514537 FGF10O15520 208 aaPredicted RBP23.45■■□□□ 1.34
CLDND1-230ENST00000514537 TRIM16O95361 564 aa23.45■■□□□ 1.34
CLDND1-230ENST00000514537 GSRP00390 522 aa23.45■■□□□ 1.34
CLDND1-230ENST00000514537 MYBL1P10243 752 aa23.45■■□□□ 1.34
CLDND1-230ENST00000514537 SPINK2P20155 84 aa23.45■■□□□ 1.34
CLDND1-230ENST00000514537 ITGB7P26010 798 aa23.45■■□□□ 1.34
CLDND1-230ENST00000514537 ZBED6P86452 979 aa23.45■■□□□ 1.34
CLDND1-230ENST00000514537 SETMARQ53H47 684 aaPredicted RBP23.45■■□□□ 1.34
CLDND1-230ENST00000514537 PRAMEF14Q5SWL7 426 aa23.45■■□□□ 1.34
CLDND1-230ENST00000514537 LEKR1Q6ZMV7 388 aa23.45■■□□□ 1.34
CLDND1-230ENST00000514537 HORMAD1Q86X24 394 aa23.45■■□□□ 1.34
CLDND1-230ENST00000514537 RHBDD1Q8TEB9 315 aa23.45■■□□□ 1.34
CLDND1-230ENST00000514537 ELF4Q99607 663 aaPredicted RBP23.45■■□□□ 1.34
CLDND1-230ENST00000514537 GPATCH2LQ9NWQ4 482 aa23.45■■□□□ 1.34
CLDND1-230ENST00000514537 SCINQ9Y6U3 715 aa23.45■■□□□ 1.34
CLDND1-230ENST00000514537 CHD5Q8TDI0 1954 aa23.44■■□□□ 1.34
CLDND1-230ENST00000514537 A0A1W2PQU0 124 aa23.44■■□□□ 1.34
CLDND1-230ENST00000514537 EIF3CLB5ME19 914 aaKnown RBP23.44■■□□□ 1.34
CLDND1-230ENST00000514537 RASA4BC9J798 803 aa23.44■■□□□ 1.34
CLDND1-230ENST00000514537 PRAMEF26H0Y7S4 382 aa23.44■■□□□ 1.34
CLDND1-230ENST00000514537 RASA4O43374 803 aa23.44■■□□□ 1.34
CLDND1-230ENST00000514537 BUB1O43683 1085 aa23.44■■□□□ 1.34
CLDND1-230ENST00000514537 NEK3P51956 506 aa23.44■■□□□ 1.34
CLDND1-230ENST00000514537 NXPH1P58417 271 aa23.44■■□□□ 1.34
CLDND1-230ENST00000514537 TPI1P60174 286 aa23.44■■□□□ 1.34
CLDND1-230ENST00000514537 CA9Q16790 459 aa23.44■■□□□ 1.34
CLDND1-230ENST00000514537 PARP15Q460N3 678 aa23.44■■□□□ 1.34
CLDND1-230ENST00000514537 ERMARDQ5T6L9 678 aa23.44■■□□□ 1.34
CLDND1-230ENST00000514537 IQCHQ86VS3 1027 aa23.44■■□□□ 1.34
CLDND1-230ENST00000514537 OR2AP1Q8NGE2 309 aa23.44■■□□□ 1.34
CLDND1-230ENST00000514537 CPLX3Q8WVH0 158 aa23.44■■□□□ 1.34
CLDND1-230ENST00000514537 VOPP1Q96AW1 172 aa23.44■■□□□ 1.34
CLDND1-230ENST00000514537 HMCESQ96FZ2 354 aa23.44■■□□□ 1.34
CLDND1-230ENST00000514537 LRIG1Q96JA1 1093 aa23.44■■□□□ 1.34
CLDND1-230ENST00000514537 PEBP4Q96S96 227 aa23.44■■□□□ 1.34
CLDND1-230ENST00000514537 EIF3CQ99613 913 aaKnown RBP23.44■■□□□ 1.34
CLDND1-230ENST00000514537 SCNM1Q9BWG6 230 aa23.44■■□□□ 1.34
CLDND1-230ENST00000514537 KLC2Q9H0B6 622 aa23.44■■□□□ 1.34
CLDND1-230ENST00000514537 MRPL47Q9HD33 250 aaKnown RBP23.44■■□□□ 1.34
CLDND1-230ENST00000514537 GDF3Q9NR23 364 aa23.44■■□□□ 1.34
CLDND1-230ENST00000514537 IFNKQ9P0W0 207 aa23.44■■□□□ 1.34
CLDND1-230ENST00000514537 PCSK1NQ9UHG2 260 aa23.44■■□□□ 1.34
CLDND1-230ENST00000514537 AP4E1Q9UPM8 1137 aa23.44■■□□□ 1.34
CLDND1-230ENST00000514537 BTBD3Q9Y2F9 522 aa23.44■■□□□ 1.34
CLDND1-230ENST00000514537 HYAL3O43820 417 aaPredicted RBP23.43■■□□□ 1.34
CLDND1-230ENST00000514537 RNF8O76064 485 aa23.43■■□□□ 1.34
CLDND1-230ENST00000514537 MIPP30301 263 aa23.43■■□□□ 1.34
CLDND1-230ENST00000514537 SNRPD1P62314 119 aaKnown RBP23.43■■□□□ 1.34
CLDND1-230ENST00000514537 OVGP1Q12889 678 aa23.43■■□□□ 1.34
CLDND1-230ENST00000514537 SERINC3Q13530 473 aa23.43■■□□□ 1.34
CLDND1-230ENST00000514537 STAT4Q14765 748 aa23.43■■□□□ 1.34
CLDND1-230ENST00000514537 SHBQ15464 509 aa23.43■■□□□ 1.34
CLDND1-230ENST00000514537 ZNF284Q2VY69 593 aa23.43■■□□□ 1.34
CLDND1-230ENST00000514537 MYLK3Q32MK0 819 aa23.43■■□□□ 1.34
CLDND1-230ENST00000514537 INO80DQ53TQ3 878 aaPredicted RBP23.43■■□□□ 1.34
CLDND1-230ENST00000514537 TDRD12Q587J7 1177 aaKnown RBP23.43■■□□□ 1.34
CLDND1-230ENST00000514537 ZNF354CQ86Y25 554 aa23.43■■□□□ 1.34
CLDND1-230ENST00000514537 RYBPQ8N488 228 aaPredicted RBP23.43■■□□□ 1.34
CLDND1-230ENST00000514537 CASKIN2Q8WXE0 1202 aa23.43■■□□□ 1.34
CLDND1-230ENST00000514537 CDC6Q99741 560 aa23.43■■□□□ 1.34
CLDND1-230ENST00000514537 SNRNP25Q9BV90 132 aaKnown RBP23.43■■□□□ 1.34
CLDND1-230ENST00000514537 DHX35Q9H5Z1 703 aaKnown RBP23.43■■□□□ 1.34
CLDND1-230ENST00000514537 ZDHHC6Q9H6R6 413 aa23.43■■□□□ 1.34
CLDND1-230ENST00000514537 ERVMER34-1Q9H9K5 563 aa23.43■■□□□ 1.34
CLDND1-230ENST00000514537 DONSONQ9NYP3 566 aa23.43■■□□□ 1.34
CLDND1-230ENST00000514537 MYO1AQ9UBC5 1043 aa23.43■■□□□ 1.34
CLDND1-230ENST00000514537 SPEGQ15772 3267 aa23.43■■□□□ 1.34
CLDND1-230ENST00000514537 PLXNA2O75051 1894 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms