RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 SFSWAPQ12872 951 aaKnown RBP8.49□□□□□ -1.05
CCL28-204ENST00000514421 SRSF5Q13243 272 aaKnown RBP8.49□□□□□ -1.05
CCL28-204ENST00000514421 ZNF211Q13398 564 aaPredicted RBP8.49□□□□□ -1.05
CCL28-204ENST00000514421 POLD3Q15054 466 aaPredicted RBP8.49□□□□□ -1.05
CCL28-204ENST00000514421 DLG2Q15700 870 aa8.49□□□□□ -1.05
CCL28-204ENST00000514421 DPYSL2Q16555 572 aa8.49□□□□□ -1.05
CCL28-204ENST00000514421 TAZQ16635 292 aa8.49□□□□□ -1.05
CCL28-204ENST00000514421 MAP7D1Q3KQU3 841 aa8.49□□□□□ -1.05
CCL28-204ENST00000514421 PPP6R3Q5H9R7 873 aaPredicted RBP8.49□□□□□ -1.05
CCL28-204ENST00000514421 SPDYCQ5MJ68 293 aa8.49□□□□□ -1.05
CCL28-204ENST00000514421 C9orf64Q5T6V5 341 aa8.49□□□□□ -1.05
CCL28-204ENST00000514421 SEL1L2Q5TEA6 688 aa8.49□□□□□ -1.05
CCL28-204ENST00000514421 DUPD1Q68J44 220 aa8.49□□□□□ -1.05
CCL28-204ENST00000514421 IL31Q6EBC2 164 aa8.49□□□□□ -1.05
CCL28-204ENST00000514421 PRR23BQ6ZRT6 265 aa8.49□□□□□ -1.05
CCL28-204ENST00000514421 CYP4V2Q6ZWL3 525 aaPredicted RBP8.49□□□□□ -1.05
CCL28-204ENST00000514421 CPNE8Q86YQ8 564 aa8.49□□□□□ -1.05
CCL28-204ENST00000514421 UMODL1-AS1Q8N2C9 162 aa8.49□□□□□ -1.05
CCL28-204ENST00000514421 ZNF366Q8N895 744 aa8.49□□□□□ -1.05
CCL28-204ENST00000514421 DCAF4L2Q8NA75 395 aa8.49□□□□□ -1.05
CCL28-204ENST00000514421 ATP11CQ8NB49 1132 aa8.49□□□□□ -1.05
CCL28-204ENST00000514421 SUMF1Q8NBK3 374 aa8.49□□□□□ -1.05
CCL28-204ENST00000514421 OR7D4Q8NG98 312 aa8.49□□□□□ -1.05
CCL28-204ENST00000514421 CASKIN2Q8WXE0 1202 aa8.49□□□□□ -1.05
CCL28-204ENST00000514421 RLN3Q8WXF3 142 aa8.49□□□□□ -1.05
CCL28-204ENST00000514421 PRCCQ92733 491 aaPredicted RBP8.49□□□□□ -1.05
CCL28-204ENST00000514421 PTPRN2Q92932 1015 aa8.49□□□□□ -1.05
CCL28-204ENST00000514421 ARHGEF2Q92974 986 aaKnown RBP8.49□□□□□ -1.05
CCL28-204ENST00000514421 ERLEC1Q96DZ1 483 aa8.49□□□□□ -1.05
CCL28-204ENST00000514421 ZC3H10Q96K80 434 aaKnown RBP8.49□□□□□ -1.05
CCL28-204ENST00000514421 KCTD15Q96SI1 283 aaPredicted RBP8.49□□□□□ -1.05
CCL28-204ENST00000514421 MKRN2Q9H000 416 aaKnown RBP8.49□□□□□ -1.05
CCL28-204ENST00000514421 DDX47Q9H0S4 455 aaKnown RBP8.49□□□□□ -1.05
CCL28-204ENST00000514421 RAB17Q9H0T7 212 aa8.49□□□□□ -1.05
CCL28-204ENST00000514421 MTG2Q9H4K7 406 aa8.49□□□□□ -1.05
CCL28-204ENST00000514421 ZWILCHQ9H900 591 aa8.49□□□□□ -1.05
CCL28-204ENST00000514421 EPB41L5Q9HCM4 733 aa8.49□□□□□ -1.05
CCL28-204ENST00000514421 ATP13A1Q9HD20 1204 aa8.49□□□□□ -1.05
CCL28-204ENST00000514421 HOMER3Q9NSC5 361 aa8.49□□□□□ -1.05
CCL28-204ENST00000514421 NDFIP2Q9NV92 336 aa8.49□□□□□ -1.05
CCL28-204ENST00000514421 CWC15Q9P013 229 aaKnown RBP8.49□□□□□ -1.05
CCL28-204ENST00000514421 VPS51Q9UID3 782 aa8.49□□□□□ -1.05
CCL28-204ENST00000514421 HPCAL4Q9UM19 191 aa8.49□□□□□ -1.05
CCL28-204ENST00000514421 INVSQ9Y283 1065 aa8.49□□□□□ -1.05
CCL28-204ENST00000514421 KMT2EQ8IZD2 1858 aa8.49□□□□□ -1.05
CCL28-204ENST00000514421 ZSCAN5CA6NGD5 496 aaPredicted RBP8.48□□□□□ -1.05
CCL28-204ENST00000514421 TMEM110-MUSTN1A8MSY1 372 aa8.48□□□□□ -1.05
CCL28-204ENST00000514421 H3BRJ5 948 aa8.48□□□□□ -1.05
CCL28-204ENST00000514421 DCLK1O15075 740 aa8.48□□□□□ -1.05
CCL28-204ENST00000514421 RNASEH1O60930 286 aaKnown RBP8.48□□□□□ -1.05
CCL28-204ENST00000514421 SIN3BO75182 1162 aa8.48□□□□□ -1.05
CCL28-204ENST00000514421 ZMPSTE24O75844 475 aa8.48□□□□□ -1.05
CCL28-204ENST00000514421 MT-CO1P00395 513 aa8.48□□□□□ -1.05
CCL28-204ENST00000514421 KRT7P08729 469 aa8.48□□□□□ -1.05
CCL28-204ENST00000514421 SRCP12931 536 aa8.48□□□□□ -1.05
CCL28-204ENST00000514421 TCF4P15884 667 aa8.48□□□□□ -1.05
CCL28-204ENST00000514421 GOT1P17174 413 aa8.48□□□□□ -1.05
CCL28-204ENST00000514421 ERCC2P18074 760 aa8.48□□□□□ -1.05
CCL28-204ENST00000514421 OXTRP30559 389 aa8.48□□□□□ -1.05
CCL28-204ENST00000514421 ACVRL1P37023 503 aa8.48□□□□□ -1.05
CCL28-204ENST00000514421 HSPA9P38646 679 aaKnown RBP8.48□□□□□ -1.05
CCL28-204ENST00000514421 ARL4AP40617 200 aa8.48□□□□□ -1.05
CCL28-204ENST00000514421 NUMBP49757 651 aa8.48□□□□□ -1.05
CCL28-204ENST00000514421 STK19P49842 368 aaPredicted RBP8.48□□□□□ -1.05
CCL28-204ENST00000514421 COPAP53621 1224 aa8.48□□□□□ -1.05
CCL28-204ENST00000514421 GEMIN4P57678 1058 aaKnown RBP8.48□□□□□ -1.05
CCL28-204ENST00000514421 TAS2R40P59535 323 aa8.48□□□□□ -1.05
CCL28-204ENST00000514421 RPS14P62263 151 aaKnown RBP8.48□□□□□ -1.05
CCL28-204ENST00000514421 KRT81Q14533 505 aa8.48□□□□□ -1.05
CCL28-204ENST00000514421 PDK2Q15119 407 aa8.48□□□□□ -1.05
CCL28-204ENST00000514421 SMTNL2Q2TAL5 461 aa8.48□□□□□ -1.05
CCL28-204ENST00000514421 PARP15Q460N3 678 aa8.48□□□□□ -1.05
CCL28-204ENST00000514421 PLK5Q496M5 336 aa8.48□□□□□ -1.05
CCL28-204ENST00000514421 DAB2IPQ5VWQ8 1189 aa8.48□□□□□ -1.05
CCL28-204ENST00000514421 ALS2CLQ60I27 953 aa8.48□□□□□ -1.05
CCL28-204ENST00000514421 TXNRD3NBQ6F5E7 133 aa8.48□□□□□ -1.05
CCL28-204ENST00000514421 DRICH1Q6PGQ1 229 aaPredicted RBP8.48□□□□□ -1.05
CCL28-204ENST00000514421 KIAA1324Q6UXG2 1013 aaKnown RBP8.48□□□□□ -1.05
CCL28-204ENST00000514421 SLC36A4Q6YBV0 504 aa8.48□□□□□ -1.05
CCL28-204ENST00000514421 RFX8Q6ZV50 586 aa8.48□□□□□ -1.05
CCL28-204ENST00000514421 SYDE1Q6ZW31 735 aaPredicted RBP8.48□□□□□ -1.05
CCL28-204ENST00000514421 KBTBD6Q86V97 674 aa8.48□□□□□ -1.05
CCL28-204ENST00000514421 MAP7D3Q8IWC1 876 aa8.48□□□□□ -1.05
CCL28-204ENST00000514421 KLHL7Q8IXQ5 586 aa8.48□□□□□ -1.05
CCL28-204ENST00000514421 RCOR2Q8IZ40 523 aa8.48□□□□□ -1.05
CCL28-204ENST00000514421 IQCKQ8N0W5 287 aa8.48□□□□□ -1.05
CCL28-204ENST00000514421 SH2D3CQ8N5H7 860 aa8.48□□□□□ -1.05
CCL28-204ENST00000514421 LZTR1Q8N653 840 aa8.48□□□□□ -1.05
CCL28-204ENST00000514421 KCTD6Q8NC69 237 aa8.48□□□□□ -1.05
CCL28-204ENST00000514421 FAM71BQ8TC56 605 aa8.48□□□□□ -1.05
CCL28-204ENST00000514421 FRS2Q8WU20 508 aa8.48□□□□□ -1.05
CCL28-204ENST00000514421 HSPH1Q92598 858 aa8.48□□□□□ -1.05
CCL28-204ENST00000514421 LOXL4Q96JB6 756 aa8.48□□□□□ -1.05
CCL28-204ENST00000514421 SPACA7Q96KW9 195 aa8.48□□□□□ -1.05
CCL28-204ENST00000514421 FAM129BQ96TA1 746 aa8.48□□□□□ -1.05
CCL28-204ENST00000514421 SH3GL2Q99962 352 aa8.48□□□□□ -1.05
CCL28-204ENST00000514421 ERP44Q9BS26 406 aa8.48□□□□□ -1.05
CCL28-204ENST00000514421 TXLNGYQ9BZA5 131 aa8.48□□□□□ -1.05
CCL28-204ENST00000514421 SLC6A17Q9H1V8 727 aa8.48□□□□□ -1.05
CCL28-204ENST00000514421 RSPH9Q9H1X1 276 aaPredicted RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms