RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 TPSAB1Q15661 275 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 ZBTB6Q15916 424 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 INSCQ1MX18 579 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 AGAP9Q5VTM2 703 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 KLC3Q6P597 504 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 LYSMD3Q7Z3D4 306 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 ZC3H18Q86VM9 953 aaKnown RBP7.54□□□□□ -1.2
CLIP1-205ENST00000514271 COLGALT2Q8IYK4 626 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 THNSL1Q8IYQ7 743 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 TMEM86AQ8N2M4 240 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 CCDC33Q8N5R6 958 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 ADCY4Q8NFM4 1077 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 CCDC110Q8TBZ0 833 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 C2orf15Q8WU43 125 aaKnown RBP7.54□□□□□ -1.2
CLIP1-205ENST00000514271 LRRC39Q96DD0 335 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 DCUN1D1Q96GG9 259 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 TMEM169Q96HH4 297 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 CPB2Q96IY4 423 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 SH2D3AQ9BRG2 576 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 DZANK1Q9NVP4 752 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 RBAKQ9NYW8 714 aaPredicted RBP7.54□□□□□ -1.2
CLIP1-205ENST00000514271 ARMCX1Q9P291 453 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 ST14Q9Y5Y6 855 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 EIF4E1BA6NMX2 242 aaKnown RBP7.54□□□□□ -1.2
CLIP1-205ENST00000514271 APOC4-APOC2K7ER74 178 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 APOC2P02655 101 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 UBTFL6P0CB48 400 aaPredicted RBP7.54□□□□□ -1.2
CLIP1-205ENST00000514271 JUNBP17275 347 aaPredicted RBP7.54□□□□□ -1.2
CLIP1-205ENST00000514271 HSD3B2P26439 372 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 PCK1P35558 622 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 OXCT1P55809 520 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 HIF1AQ16665 826 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 KBTBD12Q3ZCT8 623 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 METTL21CQ5VZV1 264 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 EEF1DP3Q658K8 133 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 ZNF554Q86TJ5 538 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 GPR180Q86V85 440 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 SNX32Q86XE0 403 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 PLD5Q8N7P1 536 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 ZFPM2Q8WW38 1151 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 CENPIQ92674 756 aaPredicted RBP7.54□□□□□ -1.2
CLIP1-205ENST00000514271 MTBPQ96DY7 904 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 YIPF2Q9BWQ6 316 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 ADAM33Q9BZ11 813 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 PALMDQ9NP74 551 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 GIN1Q9NXP7 522 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 PRPF19Q9UMS4 504 aaKnown RBP7.54□□□□□ -1.2
CLIP1-205ENST00000514271 DOCK4Q8N1I0 1966 aa7.53□□□□□ -1.2
CLIP1-205ENST00000514271 GRXCR2A6NFK2 248 aa7.53□□□□□ -1.2
CLIP1-205ENST00000514271 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.53□□□□□ -1.2
CLIP1-205ENST00000514271 EFEMP2O95967 443 aa7.53□□□□□ -1.2
CLIP1-205ENST00000514271 KDELR1P24390 212 aa7.53□□□□□ -1.2
CLIP1-205ENST00000514271 ADSLP30566 484 aaPredicted RBP7.53□□□□□ -1.2
CLIP1-205ENST00000514271 ADCY8P40145 1251 aa7.53□□□□□ -1.2
CLIP1-205ENST00000514271 ZFP36L2P47974 494 aaKnown RBP7.53□□□□□ -1.2
CLIP1-205ENST00000514271 SEMA5AQ13591 1074 aa7.53□□□□□ -1.2
CLIP1-205ENST00000514271 UBAP2LQ14157 1087 aaKnown RBP7.53□□□□□ -1.2
CLIP1-205ENST00000514271 ACAP1Q15027 740 aa7.53□□□□□ -1.2
CLIP1-205ENST00000514271 ARHGAP44Q17R89 818 aa7.53□□□□□ -1.2
CLIP1-205ENST00000514271 TCTN1Q2MV58 587 aa7.53□□□□□ -1.2
CLIP1-205ENST00000514271 LINC00299Q6ZSB3 139 aa7.53□□□□□ -1.2
CLIP1-205ENST00000514271 LIMS2Q7Z4I7 341 aa7.53□□□□□ -1.2
CLIP1-205ENST00000514271 RNF168Q8IYW5 571 aaPredicted RBP7.53□□□□□ -1.2
CLIP1-205ENST00000514271 TBC1D15Q8TC07 691 aa7.53□□□□□ -1.2
CLIP1-205ENST00000514271 FKBP10Q96AY3 582 aa7.53□□□□□ -1.2
CLIP1-205ENST00000514271 MRPL38Q96DV4 380 aaKnown RBP7.53□□□□□ -1.2
CLIP1-205ENST00000514271 EIF2AQ9BY44 585 aaKnown RBP7.53□□□□□ -1.2
CLIP1-205ENST00000514271 FRMD8Q9BZ67 464 aaPredicted RBP7.53□□□□□ -1.2
CLIP1-205ENST00000514271 VCX3BQ9H321 246 aa7.53□□□□□ -1.2
CLIP1-205ENST00000514271 VCX3AQ9NNX9 186 aa7.53□□□□□ -1.2
CLIP1-205ENST00000514271 THAP1Q9NVV9 213 aa7.53□□□□□ -1.2
CLIP1-205ENST00000514271 CXXC1Q9P0U4 656 aaPredicted RBP7.53□□□□□ -1.2
CLIP1-205ENST00000514271 BACE2Q9Y5Z0 518 aa7.53□□□□□ -1.2
CLIP1-205ENST00000514271 TET1Q8NFU7 2136 aa7.53□□□□□ -1.2
CLIP1-205ENST00000514271 F8VP50 259 aa7.53□□□□□ -1.2
CLIP1-205ENST00000514271 ACOX3O15254 700 aa7.53□□□□□ -1.2
CLIP1-205ENST00000514271 B4GALT5O43286 388 aa7.53□□□□□ -1.2
CLIP1-205ENST00000514271 HNRNPRO43390 633 aaKnown RBP7.53□□□□□ -1.2
CLIP1-205ENST00000514271 PRSS23O95084 383 aa7.53□□□□□ -1.2
CLIP1-205ENST00000514271 BPNT1O95861 308 aa7.53□□□□□ -1.2
CLIP1-205ENST00000514271 NCAM1P13591 858 aa7.53□□□□□ -1.2
CLIP1-205ENST00000514271 ETS2P15036 469 aa7.53□□□□□ -1.2
CLIP1-205ENST00000514271 KRT15P19012 456 aa7.53□□□□□ -1.2
CLIP1-205ENST00000514271 CA4P22748 312 aa7.53□□□□□ -1.2
CLIP1-205ENST00000514271 DNAJB1P25685 340 aa7.53□□□□□ -1.2
CLIP1-205ENST00000514271 CTNNB1P35222 781 aa7.53□□□□□ -1.2
CLIP1-205ENST00000514271 RBP5P82980 135 aa7.53□□□□□ -1.2
CLIP1-205ENST00000514271 MS4A2Q01362 244 aa7.53□□□□□ -1.2
CLIP1-205ENST00000514271 DUOXA2Q1HG44 320 aa7.53□□□□□ -1.2
CLIP1-205ENST00000514271 GTF2IRD2BQ6EKJ0 949 aa7.53□□□□□ -1.2
CLIP1-205ENST00000514271 NEPROQ6NW34 567 aa7.53□□□□□ -1.2
CLIP1-205ENST00000514271 KCNT2Q6UVM3 1135 aa7.53□□□□□ -1.2
CLIP1-205ENST00000514271 GTF2IRD2Q86UP8 949 aa7.53□□□□□ -1.2
CLIP1-205ENST00000514271 SLC26A11Q86WA9 606 aa7.53□□□□□ -1.2
CLIP1-205ENST00000514271 LSMEM2Q8N112 164 aa7.53□□□□□ -1.2
CLIP1-205ENST00000514271 PDPRQ8NCN5 879 aa7.53□□□□□ -1.2
CLIP1-205ENST00000514271 PAPD5Q8NDF8 572 aaKnown RBP7.53□□□□□ -1.2
CLIP1-205ENST00000514271 CATSPER2Q96P56 530 aa7.53□□□□□ -1.2
CLIP1-205ENST00000514271 GPATCH1Q9BRR8 931 aaKnown RBP7.53□□□□□ -1.2
CLIP1-205ENST00000514271 MECRQ9BV79 373 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms